Timothy L. Tickle

17.4k total citations · 3 hit papers
21 papers, 5.3k citations indexed

About

Timothy L. Tickle is a scholar working on Molecular Biology, Ecology and Genetics. According to data from OpenAlex, Timothy L. Tickle has authored 21 papers receiving a total of 5.3k indexed citations (citations by other indexed papers that have themselves been cited), including 18 papers in Molecular Biology, 4 papers in Ecology and 4 papers in Genetics. Recurrent topics in Timothy L. Tickle's work include Gut microbiota and health (10 papers), Gene expression and cancer classification (6 papers) and Microbial Community Ecology and Physiology (4 papers). Timothy L. Tickle is often cited by papers focused on Gut microbiota and health (10 papers), Gene expression and cancer classification (6 papers) and Microbial Community Ecology and Physiology (4 papers). Timothy L. Tickle collaborates with scholars based in United States, United Kingdom and Canada. Timothy L. Tickle's co-authors include Curtis Huttenhower, Xochitl C. Morgan, Dirk Gevers, George Weingart, Nicola Segata, Ramnik J. Xavier, Harry Sokol, Bruce E. Sands, Athos Bousvaros and Joshua R. Korzenik and has published in prestigious journals such as Gastroenterology, PLANT PHYSIOLOGY and Nature Methods.

In The Last Decade

Timothy L. Tickle

19 papers receiving 5.3k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

2012 2.0k citations Xochitl C. Morgan, Timothy L. Tickle et al. Genome biology profile →
Multivariable association discovery in population-scale meta-omics studies

2021 1.3k citations Himel Mallick, Ali Rahnavard et al. PLoS Computational Biology profile →
Compact graphical representation of phylogenetic data and metadata with GraPhlAn

2015 572 citations George Weingart, Timothy L. Tickle et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Timothy L. Tickle United States	14	3.9k	967	850	783	638	21	5.3k
Felix Sommer Germany	21	3.8k 1.0×	933 1.0×	1.2k 1.4×	536 0.7×	519 0.8×	40	5.8k
Ilseung Cho United States	15	3.9k 1.0×	1.1k 1.1×	1.2k 1.4×	518 0.7×	628 1.0×	29	5.8k
Ateequr Rehman Germany	29	3.5k 0.9×	1.3k 1.3×	740 0.9×	1.0k 1.3×	846 1.3×	56	5.4k
Marco Severgnini Italy	39	4.3k 1.1×	975 1.0×	1.3k 1.5×	601 0.8×	589 0.9×	107	6.3k
Tomomi Kuwahara Japan	28	3.7k 0.9×	1.4k 1.5×	693 0.8×	760 1.0×	562 0.9×	97	6.0k
Wataru Suda Japan	40	3.7k 0.9×	1.1k 1.1×	1.1k 1.3×	423 0.5×	661 1.0×	156	6.1k
L. Caetano M. Antunes Brazil	24	3.5k 0.9×	1.2k 1.2×	748 0.9×	521 0.7×	437 0.7×	53	5.1k
Anthony A. Fodor United States	39	5.4k 1.4×	1.0k 1.1×	1.4k 1.6×	678 0.9×	875 1.4×	108	7.9k
Yoshiki Vázquez‐Baeza United States	33	5.0k 1.3×	1.2k 1.3×	986 1.2×	669 0.9×	786 1.2×	48	7.6k

Countries citing papers authored by Timothy L. Tickle

Since Specialization

Citations

This map shows the geographic impact of Timothy L. Tickle's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Timothy L. Tickle with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Timothy L. Tickle more than expected).

Fields of papers citing papers by Timothy L. Tickle

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Timothy L. Tickle. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Timothy L. Tickle. The network helps show where Timothy L. Tickle may publish in the future.

Co-authorship network of co-authors of Timothy L. Tickle

This figure shows the co-authorship network connecting the top 25 collaborators of Timothy L. Tickle. A scholar is included among the top collaborators of Timothy L. Tickle based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Timothy L. Tickle. Timothy L. Tickle is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Ventura, E, Alexey Sokolov, Nancy George, et al.. (2024). Building a FAIR data ecosystem for incorporating single-cell transcriptomics data into agricultural genome to phenome research. Frontiers in Genetics. 15. 1460351–1460351.

Sokolov, Artem, Brian R. Herb, Heather H. Creasy, et al.. (2024). MAMS: matrix and analysis metadata standards to facilitate harmonization and reproducibility of single-cell data. Genome biology. 25(1). 205–205. 4 indexed citations

Tuggle, Christopher K., Tony Burdett, Timothy L. Tickle, et al.. (2023). PSII-6 Computational Tools and Resources for Analysis and Exploration of Single-Cell Rnaseq Data in Agriculture. Journal of Animal Science. 101(Supplement_2). 267–268. 1 indexed citations

Haas, Brian J., Alexander Dobin, Mahmoud Ghandi, et al.. (2023). Targeted in silico characterization of fusion transcripts in tumor and normal tissues via FusionInspector. Cell Reports Methods. 3(5). 100467–100467. 11 indexed citations

Fahlgren, Noah, Galabina Yordanova, Irene Papatheodorou, et al.. (2022). Toward a data infrastructure for the Plant Cell Atlas. PLANT PHYSIOLOGY. 191(1). 35–46. 8 indexed citations

Mallick, Himel, Ali Rahnavard, Lauren J. McIver, et al.. (2021). Multivariable association discovery in population-scale meta-omics studies. PLoS Computational Biology. 17(11). e1009442–e1009442. 1302 indexed citations breakdown →

Ma, Siyuan, Boyu Ren, Himel Mallick, et al.. (2021). A statistical model for describing and simulating microbial community profiles. PLoS Computational Biology. 17(9). e1008913–e1008913. 40 indexed citations

Li, Bo, Joshua Gould, Yiming Yang, et al.. (2020). Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq. Nature Methods. 17(8). 793–798. 84 indexed citations

Börnigen, Daniela, Boyu Ren, Robert K. L. Pickard, et al.. (2017). Alterations in oral bacterial communities are associated with risk factors for oral and oropharyngeal cancer. Scientific Reports. 7(1). 17686–17686. 106 indexed citations

10.

Yassour, Moran, Mi Young Lim, Hyun Sun Yun, et al.. (2016). Sub-clinical detection of gut microbial biomarkers of obesity and type 2 diabetes. Genome Medicine. 8(1). 17–17. 208 indexed citations

11.

Haas, Brian J., Timothy L. Tickle, Nathalie Pochet, et al.. (2016). Abstract 5266: Fast and accurate fusion transcript detection using the Trinity Cancer Transcriptome Analysis Toolkit. Cancer Research. 76(14_Supplement). 5266–5266.

12.

Morgan, Xochitl C., Boyko Kabakchiev, Levi Waldron, et al.. (2015). Associations between host gene expression, the mucosal microbiome, and clinical outcome in the pelvic pouch of patients with inflammatory bowel disease. Genome Biology. 16(1). 67–67. 143 indexed citations

13.

Yasuda, Koji, Boyu Ren, Timothy L. Tickle, et al.. (2015). Biogeography of the Intestinal Mucosal and Lumenal Microbiome in the Rhesus Macaque. Cell Host & Microbe. 17(3). 385–391. 222 indexed citations

14.

Rooks, Michelle, Patrick Veiga, Timothy L. Tickle, et al.. (2014). Gut microbiome composition and function in experimental colitis during active disease and treatment-induced remission. The ISME Journal. 8(7). 1403–1417. 325 indexed citations

15.

Tickle, Timothy L., et al.. (2013). Two-stage microbial community experimental design. The ISME Journal. 7(12). 2330–2339. 30 indexed citations

16.

Segata, Nicola, et al.. (2013). Computational meta'omics for microbial community studies. Molecular Systems Biology. 9(1). 666–666. 215 indexed citations

17.

Morgan, Xochitl C., Timothy L. Tickle, Harry Sokol, et al.. (2012). Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment. Genome biology. 13(9). R79–R79. 2029 indexed citations breakdown →

18.

Sokol, Harry, Timothy L. Tickle, Joshua R. Korzenik, et al.. (2012). 190 Functional Aspects of the Intestinal Microbiome in Inflammatory Bowel Disease. Gastroenterology. 142(5). S–47. 1 indexed citations

19.

Tickle, Timothy L., et al.. (2008). Correlation Analysis of HOX, ErbB and IGFBP Family Gene Expression in Ovarian Cancer. Cancer Investigation. 26(10). 990–998. 16 indexed citations

20.

Fodor, Anthony A., Timothy L. Tickle, & Christine Richardson. (2007). Towards the uniform distribution of null P values on Affymetrix microarrays. Genome biology. 8(5). R69–R69. 25 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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