Jussi Taipale

38.0k total citations · 16 hit papers
110 papers, 24.2k citations indexed

About

Jussi Taipale is a scholar working on Molecular Biology, Genetics and Oncology. According to data from OpenAlex, Jussi Taipale has authored 110 papers receiving a total of 24.2k indexed citations (citations by other indexed papers that have themselves been cited), including 98 papers in Molecular Biology, 21 papers in Genetics and 18 papers in Oncology. Recurrent topics in Jussi Taipale's work include Genomics and Chromatin Dynamics (42 papers), RNA and protein synthesis mechanisms (23 papers) and RNA Research and Splicing (23 papers). Jussi Taipale is often cited by papers focused on Genomics and Chromatin Dynamics (42 papers), RNA and protein synthesis mechanisms (23 papers) and RNA Research and Splicing (23 papers). Jussi Taipale collaborates with scholars based in Finland, Sweden and United Kingdom. Jussi Taipale's co-authors include Philip A. Beachy, Jorma Keski‐Oja, Michael K. Cooper, Markku Varjosalo, James Chen, Arttu Jolma, Teemu Kivioja, Yimeng Yin, Martin Enge and Tapan Maiti and has published in prestigious journals such as Nature, Science and Cell.

In The Last Decade

Jussi Taipale

109 papers receiving 23.9k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

The Human Transcription Factors

2018 2.0k citations Arttu Jolma, Laura F. Campitelli et al. Cell profile →
Inhibition of Hedgehog signaling by direct binding of cyclopamine to Smoothened

2002 1.2k citations Jussi Taipale et al. profile →
The Hedgehog and Wnt signalling pathways in cancer

2001 1.1k citations Jussi Taipale et al. Nature profile →
Effects of oncogenic mutations in Smoothened and Patched can be reversed by cyclopamine

2000 1.1k citations Jussi Taipale et al. Nature profile →
Vascular endothelial growth factor C is required for sprouting of the first lymphatic vessels from embryonic veins

2003 1.1k citations Jussi Taipale, Kari Alitalo et al. profile →
Hedgehog: functions and mechanisms

2008 962 citations Markku Varjosalo, Jussi Taipale profile →
DNA-Binding Specificities of Human Transcription Factors

2013 889 citations Arttu Jolma, Jian Yan et al. Cell profile →
CRISPR–Cas9 genome editing induces a p53-mediated DNA damage response

2018 853 citations Sandeep K. Botla, Bernhard Schmierer et al. profile →
Small molecule modulation of Smoothened activity

2002 817 citations Jussi Taipale et al. profile →
Impact of cytosine methylation on DNA binding specificities of human transcription factors

2017 801 citations Yimeng Yin, Ekaterina Morgunova et al. Science profile →
Growth factors in the extracellular matrix

1997 736 citations Jussi Taipale, Jorma Keski‐Oja profile →
Counting absolute numbers of molecules using unique molecular identifiers

2011 707 citations Teemu Kivioja, Anna Vähärautio et al. profile →
Cardiovascular Failure in Mouse Embryos Deficient in VEGF Receptor-3

1998 648 citations Jussi Taipale, Kari Alitalo et al. Science profile →
Medulloblastoma Growth Inhibition by Hedgehog Pathway Blockade

2002 632 citations Jussi Taipale et al. Science profile →
Patched acts catalytically to suppress the activity of Smoothened

2002 626 citations Jussi Taipale et al. Nature profile →
MED12 , the Mediator Complex Subunit 12 Gene, Is Mutated at High Frequency in Uterine Leiomyomas

2011 470 citations Netta Mäkinen, Miika Mehine et al. Science profile →

Peers

Countries citing papers authored by Jussi Taipale

Since Specialization

Citations

This map shows the geographic impact of Jussi Taipale's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jussi Taipale with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jussi Taipale more than expected).

Fields of papers citing papers by Jussi Taipale

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jussi Taipale. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jussi Taipale. The network helps show where Jussi Taipale may publish in the future.

Co-authorship network of co-authors of Jussi Taipale

This figure shows the co-authorship network connecting the top 25 collaborators of Jussi Taipale. A scholar is included among the top collaborators of Jussi Taipale based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jussi Taipale. Jussi Taipale is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work	Indexed citations
1	DNA-guided transcription factor interactions extend human gene regulatory code 2025 ·Nature ·Zhiyuan Xie, Ilya L. Sokolov, (unknown), (unknown), (unknown), J. Patrick Pett, (unknown), K. Wang, (unknown), А. Н. Попов, Sarah A. Teichmann, Ekaterina Morgunova, Evgeny Z. Kvon, Yimeng Yin, Jussi Taipale	7
2	Shared requirement for MYC upstream super-enhancer region in tissue regeneration and cancer 2025 ·Life Science Alliance ·Inderpreet Sur, (unknown), Jilin Zhang, (unknown), Anna Webb, (unknown), Ari Ristimäki, Pekka Katajisto, Martin Enge, (unknown), Marc de la Roche, Jussi Taipale	0
3	Interfacial water confers transcription factors with dinucleotide specificity 2025 ·Nature Structural & Molecular Biology ·Ekaterina Morgunova, Gábor Nagy, Yimeng Yin, Fangjie Zhu, Sonali Nayak, (unknown), (unknown), А. Н. Попов, Charles A. Laughton, Helmut Grubmüller, Jussi Taipale	6
4	DNA-guided transcription factor cooperativity shapes face and limb mesenchyme 2024 ·Cell ·Seungsoo Kim, Ekaterina Morgunova, Sahin Naqvi, (unknown), (unknown), (unknown), А. Н. Попов, (unknown), Angela N. Pogson, Tomek Swigut, Peter Claes, Jussi Taipale, Joanna Wysocka	29
5	Systematic analysis of binding of transcription factors to noncoding variants 2021 ·Nature ·Jian Yan, Yunjiang Qiu, (unknown), Yimeng Yin, Yang Eric Li, (unknown), Naoki Nariai, Paola Benaglio, Anugraha Raman, Xiaoyu Li, Shicai Fan, Joshua Chiou, Fulin Chen, Kelly A. Frazer, Kyle J. Gaulton, Maike Sander, Jussi Taipale, Bing Ren	88
6	CRISPR/Cas9 screening using unique molecular identifiers 2017 ·Molecular Systems Biology ·Bernhard Schmierer, Sandeep K. Botla, Jilin Zhang, Mikko Turunen, Teemu Kivioja, Jussi Taipale	43
7	Comprehensive Evaluation of Protein Coding Mononucleotide Microsatellites in Microsatellite-Unstable Colorectal Cancer 2017 ·Cancer Research ·Johanna Kondelin, Alexandra E. Gylfe, (unknown), Tomas Tanskanen, (unknown), Mervi Aavikko, Kimmo Palin, Heikki Ristolainen, Riku Katainen, Eevi Kaasinen, Minna Taipale, Jussi Taipale, Laura Renkonen‐Sinisalo, Heikki Järvinen, Jan Böhm, Jukka‐Pekka Mecklin, Pia Vahteristo, Sari Tuupanen, Lauri A. Aaltonen, Esa Pitkänen	14
8	The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression 2017 ·Nature Communications ·Ning Qing Liu, Menno ter Huurne, Luan N. Nguyen, Tianran Peng, Shuang-Yin Wang, James B. Studd, Onkar Joshi, Halit Ongen, Jesper B. Bramsen, Jian Yan, Claus L. Andersen, Jussi Taipale, Emmanouil T. Dermitzakis, Richard S. Houlston, Nina C. Hubner, Hendrik G. Stunnenberg	46
9	Impact of cytosine methylation on DNA binding specificities of human transcription factors breakdown → 2017 ·Science ·Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush Kumar Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, А. Н. Попов, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale	801
10	Myt1l safeguards neuronal identity by actively repressing many non-neuronal fates 2017 ·Nature ·Moritz Mall, Michael S. Kareta, Soham Chanda, Henrik Ahlenius, Nicholas H. Perotti, Bo Zhou, Sarah D. Grieder, Xuecai Ge, Sienna Drake, Cheen Euong Ang, (unknown), Thomas Vierbuchen, Daniel Fuentes, Philip Brennecke, Kazuhiro R. Nitta, Arttu Jolma, Lars M. Steinmetz, Jussi Taipale, Thomas C. Südhof, Marius Wernig	149
11	Genome-wide screen of cell-cycle regulators in normal and tumor cells identifies a differential response to nucleosome depletion 2016 ·Cell Cycle ·(unknown), Mikko Turunen, Oliver Mortusewicz, Teemu Kivioja, Patrick Herr, Anna Vähärautio, Mikael Björklund, Minna Taipale, Thomas Helleday, Jussi Taipale	19
12	Multiparameter functional diversity of human C2H2 zinc finger proteins 2016 ·Genome Research ·Frank W. Schmitges, Ernest Radovani, Hamed S. Najafabadi, (unknown), Laura F. Campitelli, Yimeng Yin, Arttu Jolma, Guoqing Zhong, Hongbo Guo, Tharsan Kanagalingam, Wei Dai, Jussi Taipale, Andrew Emili, Jack Greenblatt, Timothy R. Hughes	125
13	Mice Lacking a Myc Enhancer That Includes Human SNP rs6983267 Are Resistant to Intestinal Tumors 2012 ·Science ·Inderpreet Sur, Outi Hallikas, Anna Vähärautio, Jian Yan, Mikko Turunen, Martin Enge, Minna Taipale, Auli Karhu, Lauri A. Aaltonen, Jussi Taipale	149
14	Loss of SUFU Function in Familial Multiple Meningioma 2012 ·The American Journal of Human Genetics ·Mervi Aavikko, (unknown), Silva Saarinen, Pia Alhopuro, Eevi Kaasinen, Ekaterina Morgunova, Yilong Li, (unknown), Miriam J. Smith, D. Gareth Evans, Minna Pöyhönen, Anne Kiuru, Anssi Auvinen, Lauri A. Aaltonen, Jussi Taipale, Pia Vahteristo	105
15	MED12 , the Mediator Complex Subunit 12 Gene, Is Mutated at High Frequency in Uterine Leiomyomas breakdown → 2011 ·Science ·Netta Mäkinen, Miika Mehine, Jaana Tolvanen, Eevi Kaasinen, Yilong Li, Heli Lehtonen, Massimiliano Gentile, Jian Yan, Martin Enge, Minna Taipale, Mervi Aavikko, Riku Katainen, Elina Virolainen, Tom Böhling, (unknown), Virpi Launonen, Jari Sjöberg, Jussi Taipale, Pia Vahteristo, Lauri A. Aaltonen	470
16	Fibroblast Growth Factor Receptor 4 Regulates Tumor Invasion by Coupling Fibroblast Growth Factor Signaling to Extracellular Matrix Degradation 2010 ·Cancer Research ·Nami Sugiyama, Markku Varjosalo, (unknown), Jouko Lohi, Marko Hyytiäinen, Sami Kilpinen, Olli Kallioniemi, Signe Ingvarsen, Lars H. Engelholm, Jussi Taipale, Kari Alitalo, Jorma Keski‐Oja, Kaisa Lehti	44
17	Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo 2010 ·The EMBO Journal ·Gong‐Hong Wei, Gwenaël Badis, Michael F. Berger, Teemu Kivioja, Kimmo Palin, Martin Enge, Martin Bonke, Arttu Jolma, Markku Varjosalo, Andrew R. Gehrke, Jian Yan, Shaheynoor Talukder, Mikko Turunen, Mikko Taipale, Hendrik G. Stunnenberg, Esko Ukkonen, Timothy R. Hughes, Martha L. Bulyk, Jussi Taipale	433
18	Application of Active and Kinase-Deficient Kinome Collection for Identification of Kinases Regulating Hedgehog Signaling 2008 ·Cell ·Markku Varjosalo, Mikael Björklund, Fang Cheng, (unknown), Teemu Kivioja, Sami Kilpinen, Zairen Sun, Olli Kallioniemi, Hendrik G. Stunnenberg, (unknown), Päivi M. Ojala, Jussi Taipale	142
19	VEGFR-3 and Its Ligand VEGF-C Are Associated with Angiogenesis in Breast Cancer 1999 ·American Journal Of Pathology ·(unknown), Petri Salvén, Päivi Heikkilä, Jussi Taipale, Heikki Joensuu, Marko Rehn, Taina Pihlajaniemi, Herbert A. Weich, (unknown), Kari Alitalo	460
20	Association of Latent Transforming Growth Factor-.BETA. to Fibroblast Extracellular Matrix-An Insight to Proteolytic Activation. 1995 ·Trends in Glycoscience and Glycotechnology ·Jorma Keski‐Oja, Katri Koli, Jouko Lohi, Juha Saharinen, Jussi Taipale	3

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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