Marieke Simonis

3.4k citations

24 papers · 2.4k indexed · 1 hit paper · h-index 16

Impact in

Molecular Biology top 5%
- Genomics and Chromatin Dynamics
- RNA Research and Splicing
- RNA and protein synthesis mechanisms
- RNA modifications and cancer
- Epigenetics and DNA Methylation
- Genomics and Phylogenetic Studies
Cancer Research top 5%
- Cancer-related molecular mechanisms research

Papers in

Genetics 9
- Virus-based gene therapy research 2
Molecular Biology 18
- Genomics and Chromatin Dynamics 10
- RNA Research and Splicing 5
- RNA and protein synthesis mechanisms 4
- CRISPR and Genetic Engineering 3
- Viral Infectious Diseases and Gene Expression in Insects 2
- Epigenetics and DNA Methylation 2

Co-authors: Wouter de Laat Petra Klous Erik Splinter Bas van Steensel Elzo de Wit Rob Willemsen Yuri M. Moshkin Jurgen Kooren
Journals: PLoS ONE (3 papers)Nature Methods (2 papers)Genome biology (2 papers)Nucleic Acids Research (2 papers)Current topics in developmental biology (1 paper)
Partner nations: Netherlands United States Germany

In The Last Decade

Marieke Simonis

24 papers receiving 2.4k citations

Hit Papers

align trajectories log scale

Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture–on-chip (4C) 2006 · 1.0k citations

Peers

Countries citing papers authored by Marieke Simonis

Since Specialization

Citations

This map shows the geographic impact of Marieke Simonis's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Marieke Simonis with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Marieke Simonis more than expected).

Fields of papers citing papers by Marieke Simonis

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Marieke Simonis. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Marieke Simonis. The network helps show where Marieke Simonis may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Marieke Simonis, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Marieke Simonis Line = papers co-authored together Marieke Simonis links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Molecular dissection of germline chromothripsis in a developmental context using patient-derived iPS cells Genome Medicine ·Sjors Middelkamp, Sebastiaan van Heesch, A. Koen Braat, Joep de Ligt, Maarten van Iterson, Marieke Simonis, Markus J. van Roosmalen, Martijn J. E. Kelder, Evelien Kruisselbrink, Ron Hochstenbach, Nienke E. Verbeek, Elly F. Ippel, Youri Adolfs, R. Jeroen Pasterkamp, Wigard P. Kloosterman, Ewart Kuijk, Edwin Cuppen	2017	25
2	Efficient mapping of transgene integration sites and local structural changes in Cre transgenic mice using targeted locus amplification Nucleic Acids Research ·Chen Guan-na, Erik Splinter, Max van Min, Marieke Simonis, 真也橋本, M. Juanita Martinez, Vida Asghari, J. Colin Cox, Søren Warming	2016	39
3	The Genomic Scrapheap Challenge; Extracting Relevant Data from Unmapped Whole Genome Sequencing Reads, Including Strain Specific Genomic Segments, in Rats PLoS ONE ·Robin H. van der Weide, Marieke Simonis, Roel Hermsen, Pim W. Toonen, Edwin Cuppen, Joep de Ligt	2016	5
4	Lack of Major Genome Instability in Tumors of p53 Null Rats PLoS ONE ·Roel Hermsen, Pim W. Toonen, Ewart Kuijk, Sameh A. Youssef, Raoul Kuiper, Sebastiaan van Heesch, Alain de Bruin, Edwin Cuppen, Marieke Simonis	2015	12
5	Genomic landscape of rat strain and substrain variation BMC Genomics ·Roel Hermsen, Joep de Ligt, B Milardović-Sunjara, Francis Blokzijl, Sebastian Schäfer, Eleonora Adami, Sander Boymans, António Luís da Conceição Luz, Ruben van Boxtel, Robin H. van der Weide, Timothy J. Aitman, Norbert Hübner, Marieke Simonis, Boris Tabakoff, Victor Guryev, Edwin Cuppen	2015	66
6	Targeted Locus Amplification & Next Generation Sequencing for the Detection of Recurrent and Novel Gene Fusions for Improved Treatment Decisions in Pediatric Acute Lymphoblastic Leukemia Blood ·Roland P. Kuiper, Simon V. van Reijmersdal, Marieke Simonis, Jiangyan Yu, Edwin Sonneveld, Blanca Scheijen, Judith M. Boer, Aurélie Boeree, Petra Klous, Peter M. Hoogerbrugge, Mehmet Birhan Yılmaz, Frank N. van Leeuwen, Monique L. den Boer, Erik Splinter	2015	3
7	Allelic exclusion of the immunoglobulin heavy chain locus is independent of its nuclear localization in mature B cells Nucleic Acids Research ·Sjoerd J.B. Holwerda, Harmen J.G. van de Werken, Claudia Ribeiro de Almeida, Ingrid M. Bergen, Marjolein J. W. de Bruijn, Marjon J.A.M. Verstegen, Marieke Simonis, Erik Splinter, Patrick J. Wijchers, Rudi W. Hendriks, Wouter de Laat	2013	23
8	Nucleosomal DNA binding drives the recognition of H3K36-methylated nucleosomes by the PSIP1-PWWP domain Epigenetics & Chromatin ·Rick van Nuland, 茂夫寺本, Marieke Simonis, Sebastiaan van Heesch, Edwin Cuppen, Rolf Boelens, A BARTÁKOVÁ, Hugo van Ingen	2013	117
9	Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel Genome biology ·Marieke Simonis, Santosh S. Atanur, Sam Linsen, Victor Guryev, جلول بن يطو, Laurence Gamé, Nico Lansu, Ewart de Bruijn, Sebastiaan van Heesch, Steven J.M. Jones, Michal Pravenec, Timothy J. Aitman, Edwin Cuppen	2012	22
10	Interactions among Polycomb Domains Are Guided by Chromosome Architecture PLoS Genetics ·Bas Tolhuis, Marleen Blom, Ron Kerkhoven, Ludo Pagie, Hans Teunissen, Marja Nieuwland, Marieke Simonis, Wouter de Laat, Maarten van Lohuizen, Bas van Steensel	2011	128
11	Variegated gene expression caused by cell-specific long-range DNA interactions Nature Cell Biology ·Daan Noordermeer, Elzo de Wit, Petra Klous, Harmen J.G. van de Werken, Marieke Simonis, Melissa Lopez-Jones, Bert Eussen, Annelies de Klein, Robert H. Singer, Wouter de Laat	2011	120
12	High-resolution identification of balanced and complex chromosomal rearrangements by 4C technology Nature Methods ·Marieke Simonis, Petra Klous, Irene Homminga, Robert‐Jan H. Galjaard, Erikjan Rijkers, Frank Grosveld, Jules P.P. Meijerink, Wouter de Laat	2009	66
13	Chapter 5 Three‐Dimensional Organization of Gene Expression in Erythroid Cells Current topics in developmental biology ·Wouter de Laat, Petra Klous, Jurgen Kooren, Daan Noordermeer, Robert‐Jan Palstra, Marieke Simonis, Erik Splinter, Frank Grosveld	2008	60
14	FISH-eyed and genome-wide views on the spatial organisation of gene expression Biochimica et Biophysica Acta (BBA) - Molecular Cell Research ·Marieke Simonis, Wouter de Laat	2008	24
15	Maintenance of Long-Range DNA Interactions after Inhibition of Ongoing RNA Polymerase II Transcription PLoS ONE ·Robert‐Jan Palstra, Marieke Simonis, Petra Klous, Émilie Brasset, Bart A. Eijkelkamp, Wouter de Laat	2008	106
16	An evaluation of 3C-based methods to capture DNA interactions Nature Methods ·Marieke Simonis, Jurgen Kooren, Wouter de Laat	2007	229
17	Justice and the human alarm system: The impact of exclamation points and flashing lights on the justice judgment process Journal of Experimental Social Psychology ·Kees van den Bos, Jaap Ham, E. Allan Lind, Marieke Simonis, Mehran Kalhori, Mark Rijpkema	2007	43
18	Oncogenic pathways impinging on the G2-restriction point Oncogene ·Floris Foijer, Marieke Simonis, M. van Vliet, Lodewyk F.A. Wessels, Ron Kerkhoven, Peter K. Sorger, Hein te Riele	2007	7
19	Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture–on-chip (4C) Nature Genetics ·Marieke Simonis, Petra Klous, Erik Splinter, Yuri M. Moshkin, Rob Willemsen, Elzo de Wit, Bas van Steensel, Wouter de Laat Hit paper breakdown →	2006	1020
20	Ovarian function in premenopausal women affected by breast cancer: The measurement of glucuronoconjugate metabolites of 17β-estradiol and progesterone throughout one entire menstrual cycle Journal of Steroid Biochemistry ·Angela Magini, Mario Pazzagli, R. Salerno, Marieke Simonis, Giorgio Mustacchi, M. Serio	1990	4

About Marieke Simonis

Marieke Simonis is a scholar working on Genetics, Molecular Biology, Oncology, Cancer Research and Biotechnology, having authored 24 papers that have together received 2.4k indexed citations. Recurring topics across this work include Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (5 papers), RNA and protein synthesis mechanisms (4 papers), CAR-T cell therapy research (3 papers), CRISPR and Genetic Engineering (3 papers), Virus-based gene therapy research (2 papers), Viral Infectious Diseases and Gene Expression in Insects (2 papers) and Epigenetics and DNA Methylation (2 papers). The work is most often cited by research in Molecular Biology (2.2k citations), Cancer Research (337 citations), Genetics (432 citations), Plant Science (522 citations) and Virology (38 citations). Marieke Simonis has collaborated with scholars based in Netherlands, United States and Germany. Frequent co-authors include Wouter de Laat, Petra Klous, Erik Splinter, Bas van Steensel, Elzo de Wit, Rob Willemsen, Yuri M. Moshkin, Jurgen Kooren, Edwin Cuppen and Sebastiaan van Heesch. Their work appears in journals such as PLoS ONE, Nature Methods, Genome biology, Nucleic Acids Research and Current topics in developmental biology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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