J Engreitz

17.4k citations

40 papers · 6.3k indexed · 7 hit papers · h-index 27

Impact in

Cancer Research top 0.2%
- Cancer-related molecular mechanisms research
- MicroRNA in disease regulation
Molecular Biology top 1%
- RNA modifications and cancer
- RNA Research and Splicing
- RNA and protein synthesis mechanisms
- Genomics and Chromatin Dynamics
- Circular RNAs in diseases
- CRISPR and Genetic Engineering

Papers in

Cancer Research 11
- Cancer-related molecular mechanisms research 10
Molecular Biology 35
- RNA Research and Splicing 14
- RNA modifications and cancer 11
- CRISPR and Genetic Engineering 7
- RNA and protein synthesis mechanisms 7
- Genomics and Chromatin Dynamics 7
- Single-cell and spatial transcriptomics 6

Co-authors: Mitchell Guttman Eric S. Lander Michael Kane Elizabeth M. Perez Glen Munson Noah Ollikainen Patrick McDonel Sharon R. Grossman
Journals: Cell (5 papers)Nature Communications (4 papers)Nature (4 papers)Nature Genetics (3 papers)Proceedings of the National Academy of Sciences (3 papers)
Partner nations: United States Germany United Kingdom

In The Last Decade

J Engreitz

38 papers receiving 6.3k citations

Hit Papers

7 papers align trajectories log scale

Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations 2019 · 522 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2019 Nature Genetics
2016 Nature Reviews Molecular Cell Biology
2016 Science
2016 Nature
2014 Nature Structural & Molecular Biology
2014 Cell
2011 Cell

Peers

Countries citing papers authored by J Engreitz

Since Specialization

Citations

This map shows the geographic impact of J Engreitz's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by J Engreitz with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites J Engreitz more than expected).

Fields of papers citing papers by J Engreitz

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by J Engreitz. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by J Engreitz. The network helps show where J Engreitz may publish in the future.

Co-authorship network

The 25 scholars most cited alongside J Engreitz, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with J Engreitz Line = papers co-authored together J Engreitz links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	Junction-targeting designs limit the application of CRISPR-Cas13d in circular RNA perturbation studies Nucleic Acids Research ·Nasreen Nasreen, M. Kalavathy, D Kwiat, Zineb Tazi Saoud Soumiya Chiheb, J Engreitz	2025	0
2	Rewriting regulatory DNA to dissect and reprogram gene expression Cell ·Gabriella E. Martyn, Michael T. Montgomery, 淳阿部, Evando Carlos Moreira, Benjamin R. Doughty, Johannes Linder, Phuong Ngoc-Nam, Bing Mi, John Platko, Hiromichi Sakaguchi, Kelly Cochran, Bruno Cercley, Glen Munson, Anusri Pampari, Charles P. Fulco, Nidhi Sahni, David R. Kelley, Eric S. Lander, Anshul Kundaje, J Engreitz	2025	6
3	Selective Enhancer Gain-of-Function Deregulates MYC Expression in Multiple Myeloma Cancer Research ·Mahshid Rahmat, Kendell Clement, Jean-Baptiste Alberge, Romanos Sklavenitis‐Pistofidis, Yazeed Jardan, Charles P. Fulco, 重郎小島, Martha L Arroyave Cadavid, David M. Dorfman, J Engreitz, Gad Getz, Luca Pinello, Russell J.H. Ryan, Irene M. Ghobrial	2024	1
4	Genetic Determinants of the Interventricular Septum Are Linked to Ventricular Septal Defects and Hypertrophic Cardiomyopathy Circulation Genomic and Precision Medicine ·Mengyao Yu, Andrew R. Harper, Matthew Aguirre, Sardar, Catherine Tcheandjieu, Dulguun Amgalan, Christopher Grace, Anuj Goel, Martin Farrall, Ke Xiao, J Engreitz, Katherine S. Pollard, Hugh Watkins, James R. Priest	2023	3
5	KLF4 recruits SWI/SNF to increase chromatin accessibility and reprogram the endothelial enhancer landscape under laminar shear stress Nature Communications ·Jan-Renier Moonen, James Chappell, Minyi Shi, Tsutomu Shinohara, Dan Li, Maxwell R. Mumbach, Fan Zhang, Ramesh V. Nair, Joseph Nasser, John Alexander Cuadrado Hoyos, Shalina Taylor, Lingli Wang, Ross J. Metzger, Howard Y. Chang, J Engreitz, M Snyder, Marlene Rabinovitch	2022	44
6	Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity Nature Genetics ·Steven Gazal, Omer Weissbrod, Farhad Hormozdiari, Kushal K. Dey, Joseph Nasser, Karthik A. Jagadeesh, Daniel J. Weiner, Huwenbo Shi, Charles P. Fulco, Luke J. O’Connor, Bogdan Paşaniuc, J Engreitz, Alkes L. Price	2022	73
7	Computational estimates of annular diameter reveal genetic determinants of mitral valve function and disease JCI Insight ·Mengyao Yu, Catherine Tcheandjieu, Adrien Georges, Ke Xiao, Heliodoro Tejeda, Christian Dina, Thierry Le Tourneau, Madalina Fiterau, Renae Judy, Noah L. Tsao, Dulguun Amgalan, Judy E. Evaul, J Engreitz, Scott M. Damrauer, Nabila Bouatia‐Naji, James R. Priest	2022	6
8	Compatibility rules of human enhancer and promoter sequences Nature ·Drew T. Bergman, Thouis R. Jones, Vincent Liu, Judhajeet Ray, Evelyn Jagoda, Layla Siraj, Helen Kang, Joseph Nasser, Michael Kane, T Oladipupo, Tung H. Nguyen, Sharon R. Grossman, Charles P. Fulco, Eric S. Lander, J Engreitz	2022	81
9	Systematic identification of genomic elements that regulateFCGR2Aexpression and harbor variants linked with autoimmune disease Human Molecular Genetics ·Johanna Dahlqvist, Charles P. Fulco, John Ray, Thomas Liechti, Carl G. de Boer, David Lieb, Thomas Eisenhaure, J Engreitz, Mario Roederer, Nir Hacohen	2021	11
10	Activity-dependent regulome of human GABAergic neurons reveals new patterns of gene regulation and neurological disease heritability Nature Neuroscience ·Gabriella L. Boulting, R.G. Alves, Bulent Ataman, Maxwell A. Sherman, Pinky Mishra, David A. Harmin, Ava C. Carter, Daniel R. Hochbaum, Adam Granger, J Engreitz, Siniša Hrvatin, 和美呑村, Marty G. Yang, Eric C. Griffith, Michael E. Greenberg	2021	33
11	HyPR-seq: Single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes Proceedings of the National Academy of Sciences ·Jamie L. Marshall, Benjamin R. Doughty, Vidya Subramanian, Philine Guckelberger, Qingbo S. Wang, Mohd Zaki Sadik, Samuel G. Rodriques, 良彦両角, Charles P. Fulco, Joseph Nasser, Yulia Deni, Teia Noel, Sarah Mangiameli, Drew T. Bergman, Anna Greka, Eric S. Lander, Fei Chen, J Engreitz	2020	24
12	Prioritizing disease and trait causal variants at the TNFAIP3 locus using functional and genomic features Nature Communications ·John Ray, Carl G. de Boer, Charles P. Fulco, Caleb A. Lareau, Masahiro Kanai, Jacob C. Ulirsch, Ryan Tewhey, Leif S. Ludwig, Steven K. Reilly, Drew T. Bergman, J Engreitz, Robbyn Issner, Hilary K. Finucane, Eric S. Lander, Aviv Regev, Nir Hacohen	2020	50
13	Gene-centric functional dissection of human genetic variation uncovers regulators of hematopoiesis eLife ·Satish K. Nandakumar, Sean McFarland, John Anthony Jude Prakash, Caleb A. Lareau, Jacob C. Ulirsch, Leif S. Ludwig, Gaurav Agarwal, J Engreitz, Bartlomiej Przychodzen, Marie McConkey, Glenn S. Cowley, John G. Doench, Jaroslaw P. Maciejewski, Benjamin L. Ebert, David E. Root, Vijay G. Sankaran	2019	12
14	Systematic dissection of genomic features determining transcription factor binding and enhancer function Proceedings of the National Academy of Sciences ·Sharon R. Grossman, Xiaolan Zhang, Li Wang, J Engreitz, Alexandre Melnikov, Peter Rogov, Ryan Tewhey, Alina Isakova, Bart Deplancke, B Bernstein, Tarjei S. Mikkelsen, Eric S. Lander	2017	116
15	Systematic mapping of functional enhancer–promoter connections with CRISPR interference Science ·Charles P. Fulco, Mathias Munschauer, Rockwell Anyoha, Glen Munson, Sharon R. Grossman, Elizabeth M. Perez, Michael Kane, Brian Cleary, Eric S. Lander, J Engreitz Hit paper breakdown →	2016	390
16	Local regulation of gene expression by lncRNA promoters, transcription and splicing Nature ·J Engreitz, Jenna E. Haines, Elizabeth M. Perez, Glen Munson, Jenny Chen, Michael Kane, Patrick McDonel, Mitchell Guttman, Eric S. Lander Hit paper breakdown →	2016	905
17	Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre Nature Structural & Molecular Biology ·Ezgi Hacisuleyman, Loyal A. Goff, Cole Trapnell, Adam Williams, Jorge Henao‐Mejia, Lei Sun, Patrick D. McClanahan, David G. Hendrickson, Martin Sauvageau, David R. Kelley, J. S. Fuerst, J Engreitz, Eric S. Lander, Martina Les, Harvey F. Lodish, Richard A. Flavell, Arjun Raj, John L. Rinn Hit paper breakdown →	2014	490
18	The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome Science ·J Engreitz, Amy Pandya‐Jones, Patrick McDonel, Vincent Denavit, Ana Maria Moisin, Christine Surka, Sabah Kadri, Jeffrey C. Xing, Alon Goren, Eric S. Lander, Kathrin Plath, Mitchell Guttman	2013	48
19	Neuregulin Autocrine Signaling Promotes Self-Renewal of Breast Tumor-Initiating Cells by Triggering HER2/HER3 Activation Cancer Research ·Jin Yi-gui, Yuan Lin, Scott V. Bratman, Weiguo Feng, Angera H. Kuo, Ferenc A. Scheeren, J Engreitz, Sushama Varma, Robert B. West, Maximilian Diehn	2013	26
20	Independent component analysis: Mining microarray data for fundamental human gene expression modules Journal of Biomedical Informatics ·J Engreitz, Bernie J. Daigle, Chelo Casado Montañés, Russ B. Altman	2010	73

About J Engreitz

J Engreitz is a scholar working on Cancer Research, Molecular Biology, Genetics, Endocrinology and Immunology, having authored 40 papers that have together received 6.3k indexed citations. Recurring topics across this work include RNA Research and Splicing (14 papers), RNA modifications and cancer (11 papers), Cancer-related molecular mechanisms research (10 papers), CRISPR and Genetic Engineering (7 papers), RNA and protein synthesis mechanisms (7 papers), Genomics and Chromatin Dynamics (7 papers), Single-cell and spatial transcriptomics (6 papers) and Genetic Associations and Epidemiology (5 papers). The work is most often cited by research in Cancer Research (3.0k citations), Molecular Biology (5.5k citations), Aging (67 citations), Endocrinology (123 citations) and Genetics (639 citations). J Engreitz has collaborated with scholars based in United States, Germany and United Kingdom. Frequent co-authors include Mitchell Guttman, Eric S. Lander, Michael Kane, Elizabeth M. Perez, Glen Munson, Noah Ollikainen, Patrick McDonel, Sharon R. Grossman, Charles P. Fulco and Jenny Chen. Their work appears in journals such as Cell, Nature Communications, Nature, Nature Genetics and Proceedings of the National Academy of Sciences.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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