Patrick McDonel

6.3k citations

24 papers · 4.2k indexed · 3 hit papers · h-index 19

Impact in

Cancer Research top 0.5%
- Cancer-related molecular mechanisms research
Molecular Biology top 2%
- RNA Research and Splicing
- RNA modifications and cancer
- Genomics and Chromatin Dynamics
- RNA and protein synthesis mechanisms
- CRISPR and Genetic Engineering
- Circular RNAs in diseases

Papers in ⓘ

Aging 2
Cancer Research 9
- Cancer-related molecular mechanisms research 9

Co-authors: Mitchell Guttman (9 shared papers)Eric S. Lander (5 shared papers)J Engreitz (3 shared papers)Amy Chow (5 shared papers)A.A. Shishkin (4 shared papers)Christine Surka (5 shared papers)Jenny Chen (1 shared paper)Elizabeth M. Perez (1 shared paper)
Journals: Cell (4 papers)Nature (3 papers)Science (3 papers)The International Journal of Biochemistry & Cell Biology (1 paper)Journal of Investigative Dermatology (1 paper)
Partner nations: United States United Kingdom Germany

In The Last Decade

Patrick McDonel

24 papers receiving 4.1k citations

Hit Papers

align trajectories log scale

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus 2018 · 568 citations

Peers

Countries citing papers authored by Patrick McDonel

Since Specialization

Citations

This map shows the geographic impact of Patrick McDonel's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Patrick McDonel with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Patrick McDonel more than expected).

Fields of papers citing papers by Patrick McDonel

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Patrick McDonel. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Patrick McDonel. The network helps show where Patrick McDonel may publish in the future.

Co-authors

The 25 scholars most cited alongside Patrick McDonel, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Patrick McDonel Line = papers co-authored together Patrick McDonel links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 24 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	Local regulation of gene expression by lncRNA promoters, transcription and splicing Nature ·J Engreitz, Jenna E. Haines, Elizabeth M. Perez, Glen Munson, Jenny Chen, Michael Kane, Patrick McDonel, Mitchell Guttman, Eric S. Lander Hit paper breakdown →	2016	905
2	The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3 Nature ·Colleen A. McHugh, Chun‐Kan Chen, Amy Chow, Christine Surka, Christina Tran, Patrick McDonel, Amy Pandya‐Jones, Mario R. Blanco, Christina P. Burghard, Annie Moradian, Michael J. Sweredoski, A.A. Shishkin, Julia Su, Eric S. Lander, Sonja Hess, Kathrin Plath, Mitchell Guttman Hit paper breakdown →	2015	837
3	Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus Cell ·Sofia A. Quinodoz, Noah Ollikainen, Barbara Tabak, Ali Palla, J.M. Schmidt, Elizabeth Detmar, Mason Lai, A.A. Shishkin, Prashant Bhat, Yodai Takei, Vickie Trinh, Erik Aznauryan, Pamela Russell, Christine S. Cheng, Marko Jovanović, Amy Chow, Long Cai, Patrick McDonel, Manuel Garber, Mitchell Guttman Hit paper breakdown →	2018	568
4	RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin Sites Cell ·J Engreitz, Klara Sirokman, Patrick McDonel, A.A. Shishkin, Christine Surka, Pamela Russell, Sharon R. Grossman, Amy Chow, Mitchell Guttman, Eric S. Lander	2014	375
5	Evaluation of PCR-Generated Chimeras, Mutations, and Heteroduplexes with 16S rRNA Gene-Based Cloning Applied and Environmental Microbiology ·Xiaoyun Qiu, Liyou Wu, Heshu Huang, Patrick McDonel, Anthony V. Palumbo, James M. Tiedje, Jizhong Zhou	2001	334
6	Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits Cell ·Jacob C. Ulirsch, Satish K. Nandakumar, Li Wang, Felix C. Giani, Xiaolan Zhang, Peter Rogov, Alexandre Melnikov, Patrick McDonel, Ron Do, Tarjei S. Mikkelsen, Vijay G. Sankaran	2016	202
7	Xist recruits the X chromosome to the nuclear lamina to enable chromosome-wide silencing Science ·Chun-Kan Chen, Mario R. Blanco, Constanza Jackson, Erik Aznauryan, Noah Ollikainen, Christine Surka, Amy Chow, Andrea Cerase, Patrick McDonel, Mitchell Guttman	2016	193
8	Ebola Virus Glycoprotein with Increased Infectivity Dominated the 2013–2016 Epidemic Cell ·William E. Diehl, Aaron E. Lin, Nathan D. Grubaugh, Luiz Max Carvalho, Kyusik Kim, Pyae Phyo Kyawe, Sean Matthew McCauley, Elisa Donnard, Alper Küçükural, Patrick McDonel, S. F. Schaffner, Manuel Garber, Andrew Rambaut, Kristian G. Andersen, Pardis C. Sabeti, Jeremy Luban	2016	124
9	Recruitment and Spreading of the C. elegans Dosage Compensation Complex Along X Chromosomes Science ·Györgyi Csankovszki, Patrick McDonel, Barbara J Meyer	2004	99
10	Keeping things quiet: Roles of NuRD and Sin3 co-repressor complexes during mammalian development The International Journal of Biochemistry & Cell Biology ·Patrick McDonel, Ita Costello, Brian Hendrich	2008	99
11	Clustered DNA motifs mark X chromosomes for repression by a dosage compensation complex Nature ·Patrick McDonel, Judith Jans, Brant K. Peterson, Barbara J Meyer	2006	84
12	scRNA-seq of human vitiligo reveals complex networks of subclinical immune activation and a role for CCR5 in T _reg function Science Translational Medicine ·Kyle Gellatly, James P. Strassner, Kingsley I. Essien, Maggi Ahmed Refat, Rachel L. Murphy, A. Coffin-Schmitt, Amit G. Pandya, Andrea Tovar‐Garza, Michael L. Frisoli, Xueli Fan, Xiaolan Ding, E. Kim, Zainab Abbas, Patrick McDonel, Manuel Garber, John E. Harris	2021	78
13	Approaches for Understanding the Mechanisms of Long Noncoding RNA Regulation of Gene Expression Cold Spring Harbor Perspectives in Biology ·Patrick McDonel, Mitchell Guttman	2019	60
14	Sin3a is essential for the genome integrity and viability of pluripotent cells Developmental Biology ·Patrick McDonel, Jeroen Demmers, David Wei‐Min Tan, Fiona M. Watt, Brian Hendrich	2011	55
15	The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome Science ·J Engreitz, Amy Pandya‐Jones, Patrick McDonel, А. А. Шишкин, Klara Sirokman, Christine Surka, Sabah Kadri, Jeffrey C. Xing, Alon Goren, Eric S. Lander, Kathrin Plath, Mitchell Guttman	2013	48
16	Insight into GATA1 transcriptional activity through interrogation ofciselements disrupted in human erythroid disorders Proceedings of the National Academy of Sciences ·Aoi Wakabayashi, Jacob C. Ulirsch, Leif S. Ludwig, Claudia Fiorini, Makiko Yasuda, Avik Choudhuri, Patrick McDonel, Leonard I. Zon, Vijay G. Sankaran	2016	38
17	Phylogenetic relationships in Gleditsia (Leguminosae) based on ITS sequences American Journal of Botany ·Andrew Schnabel, Patrick McDonel, Jonathan F. Wendel	2003	28
18	High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen Detection Molecular Cell ·Pranitha Vangala, Rachel Murphy, Sofia A. Quinodoz, Kyle Gellatly, Patrick McDonel, Mitchell Guttman, Manuel Garber	2020	22
19	Multiple cell and population-level interactions with mouse embryonic stem cell heterogeneity Development ·Danielle Cannon, Adam Corrigan, Agnès Miermont, Patrick McDonel, Jonathan R. Chubb	2015	18
20	Sex and X-Chromosome-wide Repression in Caenorhabditiselegans Cold Spring Harbor Symposia on Quantitative Biology ·Barbara J Meyer, Patrick McDonel, Györgyi Csankovszki, E Ralston	2004	16

About Patrick McDonel

Patrick McDonel is a scholar working on Aging, Cancer Research, Molecular Biology, Immunology and Endocrinology, having authored 24 papers that have together received 4.2k indexed citations. Recurring topics across this work include Cancer-related molecular mechanisms research (9 papers), RNA Research and Splicing (6 papers), Genomics and Chromatin Dynamics (5 papers), CRISPR and Genetic Engineering (5 papers), RNA modifications and cancer (5 papers), interferon and immune responses (3 papers), Atherosclerosis and Cardiovascular Diseases (3 papers) and RNA and protein synthesis mechanisms (3 papers). The work is most often cited by research in Cancer Research (1.7k citations), Molecular Biology (3.5k citations), Aging (78 citations), Genetics (566 citations) and Endocrinology (90 citations). Patrick McDonel has collaborated with scholars based in United States, United Kingdom and Germany. Frequent co-authors include Mitchell Guttman, Eric S. Lander, J Engreitz, Amy Chow, A.A. Shishkin, Christine Surka, Jenny Chen, Elizabeth M. Perez, Glen Munson and Jenna E. Haines. Their work appears in journals such as Cell, Nature, Science, The International Journal of Biochemistry & Cell Biology and Journal of Investigative Dermatology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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