Patrick McDonel

6.3k total citations · 3 hit papers
24 papers, 4.2k citations indexed

About

Patrick McDonel is a scholar working on Molecular Biology, Cancer Research and Immunology. According to data from OpenAlex, Patrick McDonel has authored 24 papers receiving a total of 4.2k indexed citations (citations by other indexed papers that have themselves been cited), including 18 papers in Molecular Biology, 9 papers in Cancer Research and 5 papers in Immunology. Recurrent topics in Patrick McDonel's work include Cancer-related molecular mechanisms research (9 papers), RNA Research and Splicing (6 papers) and RNA modifications and cancer (5 papers). Patrick McDonel is often cited by papers focused on Cancer-related molecular mechanisms research (9 papers), RNA Research and Splicing (6 papers) and RNA modifications and cancer (5 papers). Patrick McDonel collaborates with scholars based in United States, United Kingdom and Germany. Patrick McDonel's co-authors include Mitchell Guttman, Eric S. Lander, J Engreitz, Amy Chow, A.A. Shishkin, Christine Surka, Jenny Chen, Michael Kane, Elizabeth M. Perez and Jenna E. Haines and has published in prestigious journals such as Nature, Science and Cell.

In The Last Decade

Patrick McDonel

24 papers receiving 4.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Local regulation of gene expression by lncRNA promoters, transcription and splicing

2016 905 citations J Engreitz, Jenna E. Haines et al. Nature profile →
The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3

2015 837 citations Colleen A. McHugh, Chun‐Kan Chen et al. Nature profile →
Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus

2018 568 citations Sofia A. Quinodoz, Noah Ollikainen et al. Cell profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Patrick McDonel United States	19	3.5k	1.7k	566	421	246	24	4.2k
Jonathan Houseley United Kingdom	23	3.5k 1.0×	600 0.4×	275 0.5×	457 1.1×	130 0.5×	43	3.9k
Wanjun Gu China	25	2.5k 0.7×	645 0.4×	616 1.1×	698 1.7×	154 0.6×	60	3.1k
Shunmin He China	29	2.9k 0.8×	1.3k 0.8×	290 0.5×	526 1.2×	112 0.5×	64	3.4k
Gregor D. Gilfillan Norway	25	1.8k 0.5×	576 0.3×	453 0.8×	341 0.8×	266 1.1×	55	2.5k
Petr Svoboda Czechia	36	4.5k 1.3×	1.1k 0.7×	794 1.4×	681 1.6×	359 1.5×	89	5.1k
Erwin L. van Dijk France	11	1.8k 0.5×	412 0.2×	423 0.7×	438 1.0×	115 0.5×	15	2.5k
Yan Jaszczyszyn France	15	1.8k 0.5×	365 0.2×	539 1.0×	373 0.9×	140 0.6×	35	2.7k
Ying Poi Liu Netherlands	23	2.1k 0.6×	1.1k 0.7×	458 0.8×	237 0.6×	180 0.7×	42	2.7k
Megha Ghildiyal United States	9	2.6k 0.8×	1.2k 0.7×	203 0.4×	1.1k 2.5×	175 0.7×	9	3.3k

Countries citing papers authored by Patrick McDonel

Since Specialization

Citations

This map shows the geographic impact of Patrick McDonel's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Patrick McDonel with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Patrick McDonel more than expected).

Fields of papers citing papers by Patrick McDonel

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Patrick McDonel. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Patrick McDonel. The network helps show where Patrick McDonel may publish in the future.

Co-authorship network of co-authors of Patrick McDonel

This figure shows the co-authorship network connecting the top 25 collaborators of Patrick McDonel. A scholar is included among the top collaborators of Patrick McDonel based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Patrick McDonel. Patrick McDonel is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Gellatly, Kyle, James P. Strassner, Kingsley I. Essien, et al.. (2021). scRNA-seq of human vitiligo reveals complex networks of subclinical immune activation and a role for CCR5 in T _reg function. Science Translational Medicine. 13(610). eabd8995–eabd8995. 78 indexed citations

Vangala, Pranitha, Sofia A. Quinodoz, Kyle Gellatly, et al.. (2020). High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen Detection. Molecular Cell. 80(2). 359–373.e8. 22 indexed citations

McDonel, Patrick & Mitchell Guttman. (2019). Approaches for Understanding the Mechanisms of Long Noncoding RNA Regulation of Gene Expression. Cold Spring Harbor Perspectives in Biology. 11(12). a032151–a032151. 60 indexed citations

Strassner, James P., Kyle Gellatly, Maggi Ahmed Refat, et al.. (2018). 103 Dissecting autoimmune signaling networks in vitiligo using single-cell RNA-sequencing of cells isolated directly from lesional skin. Journal of Investigative Dermatology. 138(5). S18–S18. 2 indexed citations

Quinodoz, Sofia A., Noah Ollikainen, Barbara Tabak, et al.. (2018). Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus. Cell. 174(3). 744–757.e24. 568 indexed citations breakdown →

Donnard, Elisa, Pranitha Vangala, Shaked Afik, et al.. (2018). Comparative Analysis of Immune Cells Reveals a Conserved Regulatory Lexicon. Cell Systems. 6(3). 381–394.e7. 14 indexed citations

Blanco, Mario R., Erik Aznauryan, Noah Ollikainen, et al.. (2016). Xist recruits the X chromosome to the nuclear lamina to enable chromosome-wide silencing. Science. 354(6311). 468–472. 193 indexed citations

Engreitz, J, Jenna E. Haines, Elizabeth M. Perez, et al.. (2016). Local regulation of gene expression by lncRNA promoters, transcription and splicing. Nature. 539(7629). 452–455. 905 indexed citations breakdown →

Ulirsch, Jacob C., Satish K. Nandakumar, Li Wang, et al.. (2016). Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits. Cell. 165(6). 1530–1545. 202 indexed citations

10.

Diehl, William E., Aaron E. Lin, Nathan D. Grubaugh, et al.. (2016). Ebola Virus Glycoprotein with Increased Infectivity Dominated the 2013–2016 Epidemic. Cell. 167(4). 1088–1098.e6. 124 indexed citations

11.

Wakabayashi, Aoi, Jacob C. Ulirsch, Leif S. Ludwig, et al.. (2016). Insight into GATA1 transcriptional activity through interrogation ofciselements disrupted in human erythroid disorders. Proceedings of the National Academy of Sciences. 113(16). 4434–4439. 38 indexed citations

12.

McHugh, Colleen A., Chun‐Kan Chen, Amy Chow, et al.. (2015). The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3. RePEc: Research Papers in Economics. 3 indexed citations

13.

McHugh, Colleen A., Chun‐Kan Chen, Amy Chow, et al.. (2015). The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3. Nature. 521(7551). 232–236. 837 indexed citations breakdown →

14.

Engreitz, J, Patrick McDonel, A.A. Shishkin, et al.. (2014). RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin Sites. Cell. 159(1). 188–199. 375 indexed citations

15.

Engreitz, J, Amy Pandya‐Jones, Patrick McDonel, et al.. (2013). The Xist lncRNA Exploits Three-Dimensional Genome Architecture to Spread Across the X Chromosome. Science. 341(6147). 1237973–1237973. 48 indexed citations

16.

McDonel, Patrick, Jeroen Demmers, David Wei‐Min Tan, Fiona M. Watt, & Brian Hendrich. (2011). Sin3a is essential for the genome integrity and viability of pluripotent cells. Developmental Biology. 363(1). 62–73. 55 indexed citations

17.

McDonel, Patrick, Ita Costello, & Brian Hendrich. (2008). Keeping things quiet: Roles of NuRD and Sin3 co-repressor complexes during mammalian development. The International Journal of Biochemistry & Cell Biology. 41(1). 108–116. 99 indexed citations

18.

Csankovszki, Györgyi, Patrick McDonel, & Barbara J Meyer. (2004). Recruitment and Spreading of the C. elegans Dosage Compensation Complex Along X Chromosomes. Science. 303(5661). 1182–1185. 99 indexed citations

19.

Meyer, Barbara J, Patrick McDonel, Györgyi Csankovszki, & E Ralston. (2004). Sex and X-Chromosome-wide Repression in Caenorhabditiselegans. Cold Spring Harbor Symposia on Quantitative Biology. 69(0). 71–80. 16 indexed citations

20.

Schnabel, Andrew, Patrick McDonel, & Jonathan F. Wendel. (2003). Phylogenetic relationships in Gleditsia (Leguminosae) based on ITS sequences. American Journal of Botany. 90(2). 310–320. 28 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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