Bernie J. Daigle

1.3k citations

24 papers · 442 indexed · h-index 13

Co-authors: Linda Petzold Russ B. Altman Min K. Roh J Engreitz Liangqun Lu Ruoting Yang Francis J. Doyle Dan T. Gillespie
Topics: Bioinformatics and Genomic Networks (8 papers)Gene expression and cancer classification (7 papers)Gene Regulatory Network Analysis (6 papers)
Cited by: Behavioral Neuroscience Biological Psychiatry Molecular Biology
Journals: The Journal of Chemical Physics Bioinformatics Biological Psychiatry
Partner nations: United States Russia Sweden

In The Last Decade

Bernie J. Daigle

24 papers receiving 437 citations

Peers

Countries citing papers authored by Bernie J. Daigle

Since Specialization

Citations

This map shows the geographic impact of Bernie J. Daigle's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Bernie J. Daigle with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Bernie J. Daigle more than expected).

Fields of papers citing papers by Bernie J. Daigle

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Bernie J. Daigle. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Bernie J. Daigle. The network helps show where Bernie J. Daigle may publish in the future.

Co-authorship network of co-authors of Bernie J. Daigle

This figure shows the co-authorship network connecting the top 25 collaborators of Bernie J. Daigle. A scholar is included among the top collaborators of Bernie J. Daigle based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Bernie J. Daigle. Bernie J. Daigle is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Molecular signatures of post-traumatic stress disorder in war-zone-exposed veteran and active-duty soldiers 2023 ·Cell Reports Medicine ·Seid Muhie,Aarti Gautam,Ruoting Yang,Burook Misganaw,Bernie J. Daigle,Synthia H. Mellon,Janine D. Flory,Duna Abu‐Amara,Inyoul Lee,Kai Wang,Ryan Rampersaud,Leroy Hood,Rachel Yehuda,Charles R. Marmar,Owen M. Wolkowitz,Kerry J. Ressler,Francis J. Doyle,Rasha Hammamieh,Marti Jett	14
2	Integrated analysis of proteomics, epigenomics and metabolomics data revealed divergent pathway activation patterns in the recent versus chronic post-traumatic stress disorder 2023 ·Brain Behavior and Immunity ·Seid Muhie,Aarti Gautam,Burook Misganaw,Ruoting Yang,Synthia H. Mellon,Allison Hoke,Janine D. Flory,Bernie J. Daigle,(unknown),Leroy Hood,Francis J. Doyle,Owen M. Wolkowitz,Charles R. Marmar,Kerry J. Ressler,Rachel Yehuda,Rasha Hammamieh,Marti Jett	12
3	Structure-based pharmacophore modeling 2. Developing a novel framework for structure-based pharmacophore model generation and selection 2023 ·Journal of Molecular Graphics and Modelling ·(unknown),Bernie J. Daigle,Daniel L. Baker,Abby L. Parrill	5
4	Molecular Signatures of Post-Traumatic Stress Disorder in War-Zone Exposed Veteran and Active Duty Soldiers 2022 ·SSRN Electronic Journal ·Seid Muhie,(unknown),Ruoting Yang,Burook Misganaw,Bernie J. Daigle,Synthia H. Mellon,Janine D. Flory,Duna Abu‐Amara,Inyoul Lee,Kai Wang,Leroy Hood,Rachel Yehuda,Charles R. Marmar,Owen M. Wolkowitz,Kerry J. Ressler,Francis J. Doyle,Rasha Hammamieh,Marti Jett	1
5	GEOlimma: differential expression analysis and feature selection using pre-existing microarray data 2021 ·BMC Bioinformatics ·Liangqun Lu,Kevin Townsend,Bernie J. Daigle	5
6	Prognostic analysis of histopathological images using pre-trained convolutional neural networks: application to hepatocellular carcinoma 2020 ·PeerJ ·Liangqun Lu,Bernie J. Daigle	28
7	Polygenic risk associated with post-traumatic stress disorder onset and severity 2019 ·Translational Psychiatry ·Burook Misganaw,Guia Guffanti,Adriana Lori,Duna Abu‐Amara,Janine D. Flory,(unknown),Rasha Hammamieh,Aarti Gautam,Ruoting Yang,Bernie J. Daigle,Leroy Hood,Kai Wang,Inyoul Lee,Synthia H. Mellon,Owen M. Wolkowitz,Susanne G. Mueller,Rachel Yehuda,Marti Jett,Charles R. Marmar,Kerry J. Ressler,Francis J. Doyle	18
8	icHET: interactive visualization of cytoplasmic heteroplasmy 2019 ·Bioinformatics ·Vinhthuy Phan,(unknown),(unknown),(unknown),Bernie J. Daigle,Jennifer R. Mandel	3
9	Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist 2016 ·PLoS Computational Biology ·Brian Drawert,Andreas Hellander,(unknown),D. Banerjee,Giovanni Bellesia,Bernie J. Daigle,(unknown),(unknown),Anand Gupta,Stefan Hellander,(unknown),(unknown),(unknown),(unknown),Per Lötstedt,Chandra Krintz,Linda Petzold	40
10	Identification of disease states associated with coagulopathy in trauma 2016 ·BMC Medical Informatics and Decision Making ·(unknown),(unknown),Bernie J. Daigle,Mitchell J. Cohen,Linda Petzold	3
11	Systems biology approach to understanding post-traumatic stress disorder 2015 ·Molecular BioSystems ·(unknown),Bernie J. Daigle,Kelsey R. Dean,Yuanyang Zhang,María Rodriguez-Fernández,Rasha Hammamieh,Ruoting Yang,Marti Jett,(unknown),Linda Petzold,Francis J. Doyle	16
12	A Cure Time Model for Joint Prediction of Outcome and Time-to-Outcome 2015 ·Yuanyang Zhang,Bernie J. Daigle,Mitchell J. Cohen,Linda Petzold	2
13	Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder 2013 ·BMC Systems Biology ·Ruoting Yang,Bernie J. Daigle,Seid Muhie,Rasha Hammamieh,Marti Jett,Linda Petzold,Francis J. Doyle	23
14	Core module biomarker identification with network exploration for breast cancer metastasis 2012 ·BMC Bioinformatics ·Ruoting Yang,Bernie J. Daigle,Linda Petzold,Francis J. Doyle	36
15	Accelerated maximum likelihood parameter estimation for stochastic biochemical systems 2012 ·BMC Bioinformatics ·Bernie J. Daigle,Min K. Roh,Linda Petzold,Jarad Niemi	35
16	State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events 2011 ·The Journal of Chemical Physics ·Min K. Roh,Bernie J. Daigle,Dan T. Gillespie,Linda Petzold	19
17	Automated estimation of rare event probabilities in biochemical systems 2011 ·The Journal of Chemical Physics ·Bernie J. Daigle,Min K. Roh,Dan T. Gillespie,Linda Petzold	28
18	Independent component analysis: Mining microarray data for fundamental human gene expression modules 2010 ·Journal of Biomedical Informatics ·J Engreitz,Bernie J. Daigle,(unknown),Russ B. Altman	73
19	Using Pre-existing Microarray Datasets to Increase Experimental Power: Application to Insulin Resistance 2010 ·PLoS Computational Biology ·Bernie J. Daigle,Alicia Deng,Tracey McLaughlin,Samuel W. Cushman,Margaret C. Cam,Gerald M. Reaven,Philip S. Tsao,Russ B. Altman	10
20	M-BISON: Microarray-based integration of data sources using networks 2008 ·BMC Bioinformatics ·Bernie J. Daigle,Russ B. Altman	7

About Bernie J. Daigle

Bernie J. Daigle is a scholar working on Behavioral Neuroscience, Biological Psychiatry and Developmental Neuroscience, having authored 24 papers that have together received 442 indexed citations. Recurring topics across this work include Bioinformatics and Genomic Networks (8 papers), Gene expression and cancer classification (7 papers) and Gene Regulatory Network Analysis (6 papers). The work is most often cited by research in Behavioral Neuroscience (35 citations), Biological Psychiatry (15 citations) and Molecular Biology (272 citations). Bernie J. Daigle has collaborated with scholars based in United States, Russia and Sweden. Frequent co-authors include Linda Petzold, Russ B. Altman, Min K. Roh, J Engreitz, Liangqun Lu, Ruoting Yang, Francis J. Doyle, Dan T. Gillespie, Jarad Niemi and Mohammad Soltani. Their work appears in journals such as The Journal of Chemical Physics, Bioinformatics and Biological Psychiatry.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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