Alexandre Melnikov

6.9k total citations · 2 hit papers
19 papers, 4.0k citations indexed

About

Alexandre Melnikov is a scholar working on Molecular Biology, Epidemiology and Infectious Diseases. According to data from OpenAlex, Alexandre Melnikov has authored 19 papers receiving a total of 4.0k indexed citations (citations by other indexed papers that have themselves been cited), including 16 papers in Molecular Biology, 3 papers in Epidemiology and 2 papers in Infectious Diseases. Recurrent topics in Alexandre Melnikov's work include Genomics and Chromatin Dynamics (7 papers), RNA and protein synthesis mechanisms (6 papers) and RNA Research and Splicing (6 papers). Alexandre Melnikov is often cited by papers focused on Genomics and Chromatin Dynamics (7 papers), RNA and protein synthesis mechanisms (6 papers) and RNA Research and Splicing (6 papers). Alexandre Melnikov collaborates with scholars based in United States, Sri Lanka and United Kingdom. Alexandre Melnikov's co-authors include Peter Rogov, Eric S. Lander, Tarjei S. Mikkelsen, Andreas Gnirke, Li Wang, Xiaolan Zhang, Chad Nusbaum, Timothy R. Fennell, Andreas Gnirke and Manolis Kellis and has published in prestigious journals such as Cell, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

Alexandre Melnikov

19 papers receiving 4.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes

2015 1.1k citations Adrian L. Sanborn, Suhas S.P. Rao et al. Proceedings of the National Academy of Sciences profile →
Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing

2009 983 citations Andreas Gnirke, Alexandre Melnikov et al. Nature Biotechnology profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Alexandre Melnikov United States	17	3.1k	1.0k	614	369	207	19	4.0k
Wojciech Makałowski Germany	33	3.1k 1.0×	701 0.7×	1.3k 2.2×	279 0.8×	147 0.7×	111	4.0k
Rita Neumann United Kingdom	26	2.5k 0.8×	2.0k 1.9×	859 1.4×	305 0.8×	104 0.5×	46	4.0k
Ludo Pagie Netherlands	23	4.4k 1.4×	803 0.8×	834 1.4×	174 0.5×	169 0.8×	27	5.1k
Cathy Riemer United States	15	3.0k 0.9×	1.1k 1.1×	757 1.2×	342 0.9×	74 0.4×	25	4.7k
Peter Rogov United States	14	2.0k 0.6×	870 0.8×	228 0.4×	329 0.9×	133 0.6×	15	2.7k
Albert J. Vilella United Kingdom	10	2.1k 0.7×	886 0.8×	661 1.1×	314 0.9×	57 0.3×	11	3.1k
Daniel J. Turner United Kingdom	16	2.2k 0.7×	1.2k 1.1×	557 0.9×	392 1.1×	97 0.5×	22	3.3k
Tobias Rausch Germany	23	1.9k 0.6×	925 0.9×	496 0.8×	564 1.5×	127 0.6×	52	3.1k
Steffen Schmidt Germany	30	2.6k 0.8×	1.1k 1.1×	512 0.8×	216 0.6×	60 0.3×	64	3.7k
Fátima Gebauer Spain	34	3.5k 1.1×	634 0.6×	209 0.3×	577 1.6×	256 1.2×	76	4.7k

Countries citing papers authored by Alexandre Melnikov

Since Specialization

Citations

This map shows the geographic impact of Alexandre Melnikov's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Alexandre Melnikov with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Alexandre Melnikov more than expected).

Fields of papers citing papers by Alexandre Melnikov

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Alexandre Melnikov. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Alexandre Melnikov. The network helps show where Alexandre Melnikov may publish in the future.

Co-authorship network of co-authors of Alexandre Melnikov

This figure shows the co-authorship network connecting the top 25 collaborators of Alexandre Melnikov. A scholar is included among the top collaborators of Alexandre Melnikov based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Alexandre Melnikov. Alexandre Melnikov is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

19 of 19 papers shown

1.

Donaldson, Gregory P., Wen‐Chi Chou, Abigail L. Manson, et al.. (2020). Spatially distinct physiology of Bacteroides fragilis within the proximal colon of gnotobiotic mice. Nature Microbiology. 5(5). 746–756. 64 indexed citations

2.

Grossman, Sharon R., Xiaolan Zhang, Li Wang, et al.. (2017). Systematic dissection of genomic features determining transcription factor binding and enhancer function. Proceedings of the National Academy of Sciences. 114(7). E1291–E1300. 116 indexed citations

3.

Cerqueira, Gustavo C., Ian H. Cheeseman, S. F. Schaffner, et al.. (2017). Longitudinal genomic surveillance of Plasmodium falciparum malaria parasites reveals complex genomic architecture of emerging artemisinin resistance. Genome biology. 18(1). 78–78. 83 indexed citations

4.

Weiss, Eric R., Susanna L. Lamers, Alexandre Melnikov, et al.. (2017). Early Epstein-Barr Virus Genomic Diversity and Convergence toward the B95.8 Genome in Primary Infection. Journal of Virology. 92(2). 26 indexed citations

5.

Ulirsch, Jacob C., Satish K. Nandakumar, Li Wang, et al.. (2016). Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits. Cell. 165(6). 1530–1545. 202 indexed citations

6.

Ernst, Jason, Alexandre Melnikov, Xiaolan Zhang, et al.. (2016). Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions. Nature Biotechnology. 34(11). 1180–1190. 104 indexed citations

7.

Baniecki, Mary Lynn, S. F. Schaffner, Daniel J. Park, et al.. (2015). Development of a Single Nucleotide Polymorphism Barcode to Genotype Plasmodium vivax Infections. PLoS neglected tropical diseases. 9(3). e0003539–e0003539. 105 indexed citations

8.

Sanborn, Adrian L., Suhas S.P. Rao, Su-Chen Huang, et al.. (2015). Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes. Proceedings of the National Academy of Sciences. 112(47). E6456–65. 1146 indexed citations breakdown →

9.

Melnikov, Alexandre, Peter Rogov, Li Wang, Andreas Gnirke, & Tarjei S. Mikkelsen. (2014). Comprehensive mutational scanning of a kinase in vivo reveals substrate-dependent fitness landscapes. Nucleic Acids Research. 42(14). e112–e112. 116 indexed citations

10.

Melnikov, Alexandre, Xiaolan Zhang, Peter Rogov, Li Wang, & Tarjei S. Mikkelsen. (2014). Massively Parallel Reporter Assays in Cultured Mammalian Cells. Journal of Visualized Experiments. 39 indexed citations

11.

Melnikov, Alexandre, Xiaolan Zhang, Peter Rogov, Li Wang, & Tarjei S. Mikkelsen. (2014). Massively Parallel Reporter Assays in Cultured Mammalian Cells. Journal of Visualized Experiments. 12 indexed citations

12.

Kheradpour, Pouya, Jason Ernst, Alexandre Melnikov, et al.. (2013). Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay. Genome Research. 23(5). 800–811. 227 indexed citations

13.

Melnikov, Alexandre, et al.. (2012). Cytogenetic effects of neutron therapy in patients with parotid gland tumors and relapse of breast cancer.. PubMed. 34(4). 354–7. 4 indexed citations

14.

Melnikov, Alexandre, Anand Murugan, Xiaolan Zhang, et al.. (2012). Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay. Nature Biotechnology. 30(3). 271–277. 481 indexed citations

15.

Melnikov, Alexandre, Kevin Galinsky, Peter Rogov, et al.. (2011). Hybrid selection for sequencing pathogen genomes from clinical samples. Genome biology. 12(8). R73–R73. 81 indexed citations

16.

Blumenstiel, Brendan, Kristian Cibulskis, Sheila Fisher, et al.. (2010). Targeted Exon Sequencing by In‐Solution Hybrid Selection. Current Protocols in Human Genetics. 66(1). 49 indexed citations

17.

Gnirke, Andreas, Alexandre Melnikov, Jared Maguire, et al.. (2009). Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing. Nature Biotechnology. 27(2). 182–189. 983 indexed citations breakdown →

18.

Levin, Joshua Z., Michael F. Berger, Xian Adiconis, et al.. (2009). Targeted next-generation sequencing of a cancer transcriptome enhances detection of sequence variants and novel fusion transcripts. Genome biology. 10(10). R115–R115. 146 indexed citations

19.

Fawcett, Paul, Alexandre Melnikov, & Philip Youngman. (1998). The Bacillus SpoIIGA protein is targeted to sites of spore septum formation in a SpoIIE‐independent manner. Molecular Microbiology. 28(5). 931–943. 20 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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