Gavin Ha

73.8k citations

54 papers · 3.3k indexed · 2 hit papers · h-index 22

Impact in

Cancer Research top 1%
- Cancer Genomics and Diagnostics
Oncology top 5%
- Cancer Cells and Metastasis

Papers in ⓘ

Cancer Research 32
- Cancer Genomics and Diagnostics 31
Pathology and Forensic Medicine 8
- Genetic factors in colorectal cancer 8

Co-authors: Sohrab P. Shah (13 shared papers)Samuel Aparício (9 shared papers)Andrew Roth (4 shared papers)David G. Huntsman (9 shared papers)Todd R. Golub (6 shared papers)Bang Wong (4 shared papers)Alexandre Bouchard‐Côté (2 shared papers)Justina Biele (1 shared paper)
Journals: Nature Communications (4 papers)JCO Precision Oncology (4 papers)Journal of Clinical Oncology (3 papers)JCI Insight (3 papers)Cancer Discovery (2 papers)
Partner nations: United States Canada South Africa

In The Last Decade

Gavin Ha

52 papers receiving 3.2k citations

Hit Papers

align trajectories log scale

Patient-derived xenografts undergo mouse-specific tumor evolution 2017 · 517 citations

Peers

Countries citing papers authored by Gavin Ha

Since Specialization

Citations

This map shows the geographic impact of Gavin Ha's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Gavin Ha with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Gavin Ha more than expected).

Fields of papers citing papers by Gavin Ha

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Gavin Ha. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Gavin Ha. The network helps show where Gavin Ha may publish in the future.

Co-authors

The 25 scholars most cited alongside Gavin Ha, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Gavin Ha Line = papers co-authored together Gavin Ha links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

Showing the 20 most-cited of 54 papers — load more, or switch the sort, to bring in the rest.

#	Work
1	PyClone: statistical inference of clonal population structure in cancer Nature Methods ·Andrew Roth, Jaswinder Khattra, Damian Yap, Adrian Wan, Emma Laks, Justina Biele, Gavin Ha, Samuel Aparício, Alexandre Bouchard‐Côté, Sohrab P. Shah Hit paper breakdown →	2014	575
2	Patient-derived xenografts undergo mouse-specific tumor evolution Nature Genetics ·Uri Ben‐David, Gavin Ha, Yuen‐Yi Tseng, Noah F. Greenwald, Coyin Oh, Juliann Shih, James M. McFarland, Bang Wong, Jesse S. Boehm, Rameen Beroukhim, Todd R. Golub Hit paper breakdown →	2017	517
3	deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data PLoS Computational Biology ·Andrew McPherson, Fereydoun Hormozdiari, Abdalnasser Zayed, Ryan Giuliany, Gavin Ha, Mark Sun, Malachi Griffith, Alireza Heravi Moussavi, Janine Senz, Nataliya Melnyk, Marina Pacheco, Marco A. Marra, Martin Hirst, Torsten O. Nielsen, S. Cenk Şahinalp, David G. Huntsman, Sohrab P. Shah	2011	325
4	DriverNet: uncovering the impact of somatic driver mutations on transcriptional networks in cancer Genome biology ·Ali Bashashati, Gholamreza Haffari, Jiarui Ding, Gavin Ha, Kenneth Lui, Jamie Rosner, David G. Huntsman, Carlos Caldas, Samuel Aparício, Sohrab P. Shah	2012	210
5	Combined TP53 and RB1 Loss Promotes Prostate Cancer Resistance to a Spectrum of Therapeutics and Confers Vulnerability to Replication Stress Cell Reports ·Michael D. Nyquist, Alexandra Corella, Ilsa M. Coleman, Navonil De Sarkar, Arja Kaipainen, Gavin Ha, Roman Gulati, Lisa S. Ang, Payel Chatterjee, Jared M. Lucas, Colin C. Pritchard, Gail P. Risbridger, John T. Isaacs, Bruce Montgomery, Colm Morrissey, Eva Corey, Peter S. Nelson	2020	163
6	Integrative analysis of genome-wide loss of heterozygosity and monoallelic expression at nucleotide resolution reveals disrupted pathways in triple-negative breast cancer Genome Research ·Gavin Ha, Andrew Roth, Daniel Lai, Ali Bashashati, Jiarui Ding, Rodrigo Goya, Ryan Giuliany, Jamie Rosner, Arusha Oloumi, Karey Shumansky, Suet‐Feung Chin, Gulisa Turashvili, Martin Hirst, Carlos Caldas, Marco A. Marra, Samuel Aparício, Sohrab P. Shah	2012	152
7	SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors Bioinformatics ·Rodrigo Goya, Mark Sun, Ryan D. Morin, Gillian Leung, Gavin Ha, Kimberley C. Wiegand, Janine Senz, Anamaria Crisan, Marco A. Marra, Martin Hirst, David G. Huntsman, Kevin P. Murphy, Samuel Aparício, Sohrab P. Shah	2010	145
8	JointSNVMix: a probabilistic model for accurate detection of somatic mutations in normal/tumour paired next-generation sequencing data Bioinformatics ·Andrew Roth, Jiarui Ding, Ryan D. Morin, Anamaria Crisan, Gavin Ha, Ryan Giuliany, Ali Bashashati, Martin Hirst, Gulisa Turashvili, Arusha Oloumi, Marco A. Marra, Samuel Aparício, Sohrab P. Shah	2012	117
9	Multifocal endometriotic lesions associated with cancer are clonal and carry a high mutation burden The Journal of Pathology ·Michael S. Anglesio, Ali Bashashati, Yi Kan Wang, Janine Senz, Gavin Ha, Winnie Yang, Mohamed Radhouane Aniba, Leah Prentice, Hossein Farahani, Hector Li Chang, Anthony N. Karnezis, Marco A. Marra, Paul J. Yong, Martin Hirst, C. Blake Gilks, Sohrab P. Shah, David G. Huntsman	2015	116
10	Genetic interrogation of circulating multiple myeloma cells at single-cell resolution Science Translational Medicine ·Jens G. Lohr, Sora Kim, Joshua Gould, Birgit Knoechel, Yotam Drier, Matthew J. Cotton, Daniel H.D. Gray, Nicole Birrer, Bang Wong, Gavin Ha, Cheng-Zhong Zhang, Guangwu Guo, Matthew Meyerson, Andrew J. Yee, Jesse S. Boehm, Noopur Raje, Todd R. Golub	2016	102
11	Somatic Superenhancer Duplications and Hotspot Mutations Lead to Oncogenic Activation of the KLF5 Transcription Factor Cancer Discovery ·Xiaoyang Zhang, Peter S. Choi, Joshua M. Francis, Galen F. Gao, Joshua D. Campbell, Aruna Ramachandran, Yoichiro Mitsuishi, Gavin Ha, Juliann Shih, Francisca Vázquez, Aviad Tsherniak, Alison M. Taylor, Jin Zhou, Zhong Wu, Ashton C. Berger, Marios Giannakis, William C. Hahn, Andrew D. Cherniack, Matthew Meyerson	2017	85
12	Detection of Somatic Structural Variants Enables Quantification and Characterization of Circulating Tumor DNA in Children With Solid Tumors JCO Precision Oncology ·Kelly Klega, Alma Imamović, Gavin Ha, Andrea Clapp, Stephanie Meyer, Abigail Ward, Catherine Clinton, Anwesha Nag, Eliezer M. Van Allen, Elizabeth A. Mullen, Steven G. DuBois, Katherine A. Janeway, Matthew Meyerson, Aaron R. Thorner, Brian D. Crompton	2018	84
13	Genetic Ancestry Contributes to Somatic Mutations in Lung Cancers from Admixed Latin American Populations Cancer Discovery ·Jian Carrot‐Zhang, Giovanny Soca‐Chafre, Nick Patterson, Aaron R. Thorner, Anwesha Nag, Jacqueline Watson, Giulio Genovese, July Rodríguez, Maya K. Gelbard, Luis Corrales, Yoichiro Mitsuishi, Gavin Ha, Joshua D. Campbell, Geoffrey R. Oxnard, Óscar Arrieta, Andrés F. Cardona, Alexander Gusev, Matthew Meyerson	2020	71
14	Systematic analysis of somatic mutations impacting gene expression in 12 tumour types Nature Communications ·Jiarui Ding, Melissa K. McConechy, Hugo M. Horlings, Gavin Ha, Fong Chun Chan, Tyler Funnell, Sarah C. Mullaly, Jüri Reimand, Ali Bashashati, Gary D. Bader, David G. Huntsman, Samuel Aparício, Anne Condon, Sohrab P. Shah	2015	69
15	CDK12-Mutated Prostate Cancer: Clinical Outcomes With Standard Therapies and Immune Checkpoint Blockade JCO Precision Oncology ·Michael T. Schweizer, Gavin Ha, Roman Gulati, Landon C. Brown, Rana R. McKay, Tanya B. Dorff, Anna C. H. Hoge, Jonathan Reichel, Pankaj Vats, Deepak Kilari, Vaibhav G. Patel, William Oh, Arul M. Chinnaiyan, Colin C. Pritchard, Andrew J. Armstrong, Bruce Montgomery, Ajjai Alva	2020	64
16	Tumor Growth Inhibition by Olaparib in BRCA2 Germline-Mutated Patient-Derived Ovarian Cancer Tissue Xenografts Clinical Cancer Research ·Ursula Kortmann, Jessica N. McAlpine, Hui Xue, Jun Guan, Gavin Ha, Sophie Tully, Sharaz Shafait, Alan Lau, Aaron Cranston, Mark J. O’Connor, David G. Huntsman, Yuzhuo Wang, C. Blake Gilks	2010	52
17	Cancer aneuploidies are shaped primarily by effects on tumour fitness Nature ·Juliann Shih, Shahab Sarmashghi, Nadja Zhakula-Kostadinova, Shu Zhang, Yohanna Georgis, Stephanie Hoyt, Michael S. Cuoco, Galen F. Gao, Liam F. Spurr, Ashton C. Berger, Gavin Ha, Verónica Rendo, Hui Shen, Matthew Meyerson, Andrew D. Cherniack, Alison M. Taylor, Rameen Beroukhim	2023	46
18	Detection of Circulating Tumor DNA in Patients With Leiomyosarcoma With Progressive Disease JCO Precision Oncology ·Matthew L. Hemming, Kelly Klega, Justin Rhoades, Gavin Ha, Kate E. Acker, Jessica L. Andersen, Edwin Thai, Anwesha Nag, Aaron R. Thorner, Chandrajit P. Raut, Suzanne George, Brian D. Crompton	2019	46
19	The landscape of chromosomal aberrations in breast cancer mouse models reveals driver-specific routes to tumorigenesis Nature Communications ·Uri Ben‐David, Gavin Ha, Prasidda Khadka, Xin Jin, Bang Wong, Lude Franke, Todd R. Golub	2016	37
20	Multiplexed functional genomic analysis of 5’ untranslated region mutations across the spectrum of prostate cancer Nature Communications ·Yiting Lim, Sonali Arora, Samantha L. Schuster, Lukas Corey, Matthew Fitzgibbon, Cynthia L. Wladyka, Xiaoying Wu, Ilsa M. Coleman, Jeffrey J. Delrow, Eva Corey, Lawrence D. True, Peter S. Nelson, Gavin Ha, Andrew C. Hsieh	2021	37

About Gavin Ha

Gavin Ha is a scholar working on Cancer Research, Pathology and Forensic Medicine, Pulmonary and Respiratory Medicine, Molecular Biology and Oncology, having authored 54 papers that have together received 3.3k indexed citations. Recurring topics across this work include Cancer Genomics and Diagnostics (31 papers), Genetic factors in colorectal cancer (8 papers), Prostate Cancer Treatment and Research (8 papers), Epigenetics and DNA Methylation (5 papers), Genomics and Phylogenetic Studies (4 papers), RNA Research and Splicing (4 papers), RNA modifications and cancer (4 papers) and Genomic variations and chromosomal abnormalities (4 papers). The work is most often cited by research in Cancer Research (1.6k citations), Oncology (951 citations), Molecular Biology (1.7k citations), Pathology and Forensic Medicine (407 citations) and Pulmonary and Respiratory Medicine (688 citations). Gavin Ha has collaborated with scholars based in United States, Canada and South Africa. Frequent co-authors include Sohrab P. Shah, Samuel Aparício, Andrew Roth, David G. Huntsman, Todd R. Golub, Bang Wong, Alexandre Bouchard‐Côté, Justina Biele, Damian Yap and Jaswinder Khattra. Their work appears in journals such as Nature Communications, JCO Precision Oncology, Journal of Clinical Oncology, JCI Insight and Cancer Discovery.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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