D.R. Mani

23.3k total citations · 3 hit papers
61 papers, 5.7k citations indexed

About

D.R. Mani is a scholar working on Molecular Biology, Spectroscopy and Artificial Intelligence. According to data from OpenAlex, D.R. Mani has authored 61 papers receiving a total of 5.7k indexed citations (citations by other indexed papers that have themselves been cited), including 31 papers in Molecular Biology, 28 papers in Spectroscopy and 7 papers in Artificial Intelligence. Recurrent topics in D.R. Mani's work include Advanced Proteomics Techniques and Applications (28 papers), Mass Spectrometry Techniques and Applications (13 papers) and Ubiquitin and proteasome pathways (8 papers). D.R. Mani is often cited by papers focused on Advanced Proteomics Techniques and Applications (28 papers), Mass Spectrometry Techniques and Applications (13 papers) and Ubiquitin and proteasome pathways (8 papers). D.R. Mani collaborates with scholars based in United States, Canada and United Kingdom. D.R. Mani's co-authors include Steven A. Carr, Karl R. Clauser, Michael A. Gillette, Philipp Mertins, Hasmik Keshishian, Namrata D. Udeshi, Michael Burgess, Eric Kuhn, Jacob D. Jaffe and Lukas Mueller and has published in prestigious journals such as Nature, Cell and Proceedings of the National Academy of Sciences.

In The Last Decade

D.R. Mani

57 papers receiving 5.5k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Gene expression-based classification of malignant gliomas correlates better with survival than histological classification.

2003 719 citations D.R. Mani, Todd R. Golub et al. profile →
Integrated proteomic analysis of post-translational modifications by serial enrichment

2013 471 citations Namrata D. Udeshi, Karl R. Clauser et al. profile →
Proteomic analyses of ECM during pancreatic ductal adenocarcinoma progression reveal different contributions by tumor and stromal cells

2019 291 citations Karl R. Clauser, D.R. Mani et al. Proceedings of the National Academy of Sciences profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
D.R. Mani United States	32	3.9k	2.1k	768	545	412	61	5.7k
Peter Hornbeck United States	22	4.7k 1.2×	856 0.4×	761 1.0×	443 0.8×	854 2.1×	42	6.1k
Thang V. Pham Netherlands	35	2.2k 0.6×	694 0.3×	599 0.8×	764 1.4×	193 0.5×	134	3.4k
Mark Waltham Australia	29	3.9k 1.0×	329 0.2×	1.3k 1.7×	858 1.6×	399 1.0×	72	5.4k
Sampsa Hautaniemi Finland	49	4.9k 1.3×	443 0.2×	1.5k 2.0×	1.6k 2.9×	510 1.2×	186	7.6k
Martin L. Miller United States	21	3.2k 0.8×	450 0.2×	914 1.2×	1.2k 2.3×	535 1.3×	32	4.5k
Caroline Kampf Sweden	30	2.9k 0.7×	370 0.2×	429 0.6×	633 1.2×	286 0.7×	43	3.9k
Steve Goodison United States	46	3.2k 0.8×	424 0.2×	1.5k 2.0×	1.2k 2.2×	496 1.2×	159	6.1k
Luisa Castagnoli Italy	41	6.2k 1.6×	336 0.2×	659 0.9×	305 0.6×	1.0k 2.5×	104	7.5k
Julio Sáez-Rodríguez Germany	58	8.9k 2.3×	415 0.2×	1.1k 1.4×	1.2k 2.2×	475 1.2×	249	12.4k
Christopher W.V. Hogue Canada	25	6.9k 1.8×	375 0.2×	422 0.5×	770 1.4×	840 2.0×	62	8.9k

Countries citing papers authored by D.R. Mani

Since Specialization

Citations

This map shows the geographic impact of D.R. Mani's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by D.R. Mani with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites D.R. Mani more than expected).

Fields of papers citing papers by D.R. Mani

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by D.R. Mani. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by D.R. Mani. The network helps show where D.R. Mani may publish in the future.

Co-authorship network of co-authors of D.R. Mani

This figure shows the co-authorship network connecting the top 25 collaborators of D.R. Mani. A scholar is included among the top collaborators of D.R. Mani based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with D.R. Mani. D.R. Mani is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Haines, Moe, Claudia Ctortecka, Chelsea J. Newton, et al.. (2025). High-Throughput Proteomic and Phosphoproteomic Analysis of Formalin-Fixed Paraffin-Embedded Tissues. Molecular & Cellular Proteomics. 24(9). 101044–101044.

Müller‐Dott, Sophia, Eric J. Jaehnig, Wen Jiang, et al.. (2025). Comprehensive evaluation of phosphoproteomic-based kinase activity inference. Nature Communications. 16(1). 4771–4771.

Ctortecka, Claudia, Natalie M. Clark, Brian Boyle, et al.. (2024). Automated single-cell proteomics providing sufficient proteome depth to study complex biology beyond cell type classifications. Nature Communications. 15(1). 5707–5707. 35 indexed citations

Mani, D.R., Karsten Krug, Bing Zhang, et al.. (2022). Cancer proteogenomics: current impact and future prospects. Nature reviews. Cancer. 22(5). 298–313. 119 indexed citations

Geffen, Yifat, Shankara Anand, Yo Akiyama, et al.. (2021). Abstract 16: Patterns and regulation of post translational modifications in cancer. Cancer Research. 81(13_Supplement). 16–16. 1 indexed citations

Gillette, Michael A., D.R. Mani, Karell G. Pellé, et al.. (2020). Biomarkers to Distinguish Bacterial From Viral Pediatric Clinical Pneumonia in a Malaria-Endemic Setting. Clinical Infectious Diseases. 73(11). e3939–e3948. 13 indexed citations

Li, Jun, Shuo Han, Hongjie Li, et al.. (2020). Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators. Cell. 180(2). 373–386.e15. 122 indexed citations

Myers, Samuel A., Ryan Peckner, Adam L. Haber, et al.. (2019). Streamlined Protocol for Deep Proteomic Profiling of FAC-sorted Cells and Its Application to Freshly Isolated Murine Immune Cells*. Molecular & Cellular Proteomics. 18(5). 995a–1009. 71 indexed citations

Song, Ziyuan, Rachael A. Mansbach, Hua He, et al.. (2017). Modulation of polypeptide conformation through donor–acceptor transformation of side-chain hydrogen bonding ligands. Nature Communications. 8(1). 92–92. 60 indexed citations

10.

Clauser, Karl R., D.R. Mani, Steven A. Carr, Alexandra Naba, & Richard O. Hynes. (2017). Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression. Nature. 1 indexed citations

11.

Ruggles, Kelly V., Karsten Krug, Xiaojing Wang, et al.. (2017). Methods, Tools and Current Perspectives in Proteogenomics. Molecular & Cellular Proteomics. 16(6). 959–981. 104 indexed citations

12.

Ong, Shao‐En, Monica Schenone, Adam A. Margolin, et al.. (2009). Identifying the proteins to which small-molecule probes and drugs bind in cells. Proceedings of the National Academy of Sciences. 106(12). 4617–4622. 237 indexed citations

13.

Kuhn, Eric, Terri A. Addona, Hasmik Keshishian, et al.. (2009). Developing Multiplexed Assays for Troponin I and Interleukin-33 in Plasma by Peptide Immunoaffinity Enrichment and Targeted Mass Spectrometry. Clinical Chemistry. 55(6). 1108–1117. 197 indexed citations

14.

Fusaro, Vincent A., D.R. Mani, Jill P. Mesirov, & Steven A. Carr. (2009). Prediction of high-responding peptides for targeted protein assays by mass spectrometry. Nature Biotechnology. 27(2). 190–198. 233 indexed citations

15.

Du, Jinyan, Karl R. Clauser, D.R. Mani, et al.. (2008). Bead-based profiling of tyrosine kinase phosphorylation identifies SRC as a potential target for glioblastoma therapy. Nature Biotechnology. 27(1). 77–83. 192 indexed citations

16.

Drew, James H., et al.. (2003). A Study In Business-to-Business Complaining Behavior: Yellow Pages Advertisers. The Journal of Consumer Satisfaction, Dissatisfaction & Complaining Behavior. 16. 1. 2 indexed citations

17.

Drew, James H., et al.. (1999). Patterns of Customer Exit in a Contract-Based Subscription Service. The Journal of Consumer Satisfaction, Dissatisfaction & Complaining Behavior. 12. 1 indexed citations

18.

Mani, D.R.. (1996). The design and implementation of massively parallel knowledge representation and reasoning systems: a connectionist approach. UMI eBooks. 3 indexed citations

19.

Mani, D.R. & Lokendra Shastri. (1992). Multiple Instantiation of Predicates in a Connectionist Rule-Based Reasoner. Journal of Human Genetics. 49(7). 360–365. 1 indexed citations

20.

Shastri, Lokendra, Venkat Ajjanagadde, & D.R. Mani. (1990). An Optimally Efficient, Limited Inference, Connectionist Rule-Based Reasoning System with an Included Type Hierarchy. 366. 1 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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