Dana Pe’er

52.1k citations

120 papers · 23.2k indexed · 22 hit papers · h-index 58

Biophysics top 0.05%
- Cell Image Analysis Techniques 15
Immunology top 0.2%
- T-cell and B-cell Immunology 14
- Immune Cell Function and Interaction 12
Molecular Biology top 0.1%
- Single-cell and spatial transcriptomics 47
- Gene Regulatory Network Analysis 19
- Gene expression and cancer classification 16
- Bioinformatics and Genomic Networks 15
Cancer Research top 0.5%
- Cancer Genomics and Diagnostics 19
Oncology top 0.2%

Co-authors: Nir Friedman Garry P. Nolan Iftach Nachman Michal Linial Sean C. Bendall Erin F. Simonds Jacob Levine Karen Sachs
Cited by: Biophysics Immunology Molecular Biology
Journals: Cell (12 papers)Nature Biotechnology (7 papers)Cancer Research (7 papers)
Partner nations: United States Israel Canada

In The Last Decade

Dana Pe’er

117 papers receiving 22.8k citations

Hit Papers

15 papers align trajectories log scale

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

2024 Nature Methods
2023 Nature
2022 Nature Cancer
2022 Nature Methods
2020 Nature Reviews Clinical Oncology
2020 Nature Medicine
2020 American Journal of Respiratory and Critical Care Medicine
2019 Cell
2019 Nature Biotechnology
2018 Cell
2018 Cell
2017 Cell
2017 Cell
2016 Nature Biotechnology
2015 Cell
2014 Cell
2013 Nature Biotechnology
2013 Cytometry Part A
2011 Science
2005 Science
2003 Nature Genetics
2000 Journal of Computational Biology

Peers

Countries citing papers authored by Dana Pe’er

Since Specialization

Citations

This map shows the geographic impact of Dana Pe’er's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Dana Pe’er with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Dana Pe’er more than expected).

Fields of papers citing papers by Dana Pe’er

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Dana Pe’er. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Dana Pe’er. The network helps show where Dana Pe’er may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Dana Pe’er, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Dana Pe’er Line = papers co-authored together Dana Pe’er links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	Interferon-γ orchestrates leptomeningeal anti-tumour response Nature ·Ján Remšík,Xinran Tong,Russell Kunes,Minjun Li,Thomas Schade,Tess Sorensen,H. Leang,André Senn,Guo Feng Zhang,Uğur Sener,Jessica Wilcox,Liao Ailing,C.B. Chastain,Tejus Bale,Ronan Chaligné,Joseph C. Sun,Chrysothemis C. Brown,Dana Pe’er,Adrienne Boire	2025	8
2	Transcriptomic Plasticity is a Hallmark of Metastatic Pancreatic Cancer Cancer Research ·Alejandro Jiménez-Sánchez,Sitara Persad,Akimasa Hayashi,Shigeaki Umeda,Roshan Sharma,Yubin Xie,Arnav Mehta,Wungki Park,Ignas Masilionis,Tinyi Chu,F. Boccalini,Enisa Omanovic-Mikloicanin,Ronan Chaligné,Eileen M. O’Reilly,Linas Mažutis,Tal Nawy,Itsik Pe’er,Christine A. Iacobuzio–Donahue,Dana Pe’er	2025	0
3	CellRank 2: unified fate mapping in multiview single-cell databreakdown → Nature Methods ·Philipp Weiler,Marius Lange,Michal Klein,Dana Pe’er,Fabian J. Theis	2024	49
4	scKINETICS: inference of regulatory velocity with single-cell transcriptomics data Bioinformatics ·Cassandra Burdziak,Chujun Zhao,Doron Haviv,Direna Alonso‐Curbelo,Scott W. Lowe,Dana Pe’er	2023	7
5	Supervised discovery of interpretable gene programs from single-cell data Nature Biotechnology ·Russell Kunes,Thomas Walle,Max Land,Tal Nawy,Dana Pe’er	2023	26
6	CellRank for directed single-cell fate mappingbreakdown → Nature Methods ·Marius Lange,Volker Bergen,Michal Klein,Manu Setty,Bernhard Reuter,Mostafa Bakhti,Heiko Lickert,Meshal Ansari,Janine Gote-Schniering,Herbert B. Schiller,Dana Pe’er,Fabian J. Theis	2022	282
7	Systematic Comparison of Pancreatic Ductal Adenocarcinoma Models Identifies a Conserved Highly Plastic Basal Cell State Cancer Research ·Kenneth L. Pitter,Olivera Grbovic-Huezo,Simon Joost,Anupriya Singhal,Jun Hua,Katherine Wu,Matilda Holm,С. С. Котов,Arjun Bhutkar,Anna Hudson,Nicolas Lecomte,Elisa de Stanchina,Ronan Chaligné,Christine A. Iacobuzio–Donahue,Dana Pe’er,Tuomas Tammela	2022	11
8	Fully defined human pluripotent stem cell-derived microglia and tri-culture system model C3 production in Alzheimer’s disease Nature Neuroscience ·T. Shepherd,Lisa Sikkema,Jason Tchieu,Nathalie Saurat,Ryan Walsh,Oliver Harschnitz,Gabriele Ciceri,Marjolein A. M. Sneeboer,Linas Mažutis,Manu Setty,Paul Zumbo,Doron Betel,Lot D. de Witte,Dana Pe’er,Lorenz Studer	2021	145
9	A unified atlas of CD8 T cell dysfunctional states in cancer and infection Molecular Cell ·Yuri Pritykin,Joris van der Veeken,Allison R. Pine,Yi Zhong,Merve Şahin,Linas Mažutis,Dana Pe’er,Alexander Y. Rudensky,Christina S. Leslie	2021	73
10	Regenerative lineages and immune-mediated pruning in lung cancer metastasisbreakdown → Nature Medicine ·Ashley M. Laughney,Jing Hu,Nathaniel R. Campbell,Samuel F. Bakhoum,Manu Setty,Vincent‐Philippe Lavallée,Yubin Xie,Ignas Masilionis,Ambrose Carr,Sanjay Kottapalli,Viola Allaj,Marissa S. Mattar,Natasha Rekhtman,João B. Xavier,Linas Mažutis,John T. Poirier,Charles M. Rudin,Dana Pe’er,Joan Massagué	2020	251
11	Regenerative potential of prostate luminal cells revealed by single-cell analysis Science ·Wouter R. Karthaus,Matan Hofree,Danielle Choi,Eliot Linton,Mesruh Turkekul,Alborz Bejnood,Brett F. Carver,Anuradha Gopalan,Wassim Abida,Vincent P. Laudone,Moshe Biton,Ojasvi Chaudhary,Tianhao Xu,Ignas Masilionis,Katia Manova,Linas Mažutis,Dana Pe’er,Aviv Regev,Charles L. Sawyers	2020	170
12	Immune profiling of human tumors identifies CD73 as a combinatorial target in glioblastoma Nature Medicine ·Sangeeta Goswami,Thomas Walle,Andrew Cornish,Sreyashi Basu,Swetha Anandhan,Irina Fernandez,Luis M. Vence,Jorge Blando,Hao Zhao,Shalini S. Yadav,Martina Ott,Ling Yuan Kong,Amy B. Heimberger,John de Groot,Boris Sepesi,Michael J. Overman,Scott Kopetz,James P. Allison,Dana Pe’er,Padmanee Sharma	2019	251
13	CD49b defines functionally mature Treg cells that survey skin and vascular tissues The Journal of Experimental Medicine ·Xiying Fan,Bruno Moltedo,Alejandra Mendoza,Alexey N. Davydov,Alba Torrillas Pérez,Linas Mažutis,Roshan Sharma,Dana Pe’er,Dmitriy M. Chudakov,Alexander Y. Rudensky	2018	33
14	Learning time-varying information flow from single-cell epithelial to mesenchymal transition data PLoS ONE ·Smita Krishnaswamy,Nevena Zivanovic,Roshan Sharma,Dana Pe’er,Bernd Bodenmiller	2018	12
15	PD-1 Blockade Expands Intratumoral Memory T Cells Cancer Immunology Research ·Antoni Ribas,Daniel Sanghoon Shin,Jesse M. Zaretsky,Juliet Frederiksen,Andrew Cornish,Earl Avramis,Elizabeth Seja,Christine Kivork,Janet Siebert,Paula Kaplan‐Lefko,Xiaoyan Wang,Bartosz Chmielowski,John A. Glaspy,Paul C. Tumeh,Thinle Chodon,Dana Pe’er,Begoña Comı́n-Anduix	2016	302
16	Single-cell mass cytometry of TCR signaling: Amplification of small initial differences results in low ERK activation in NOD mice Proceedings of the National Academy of Sciences ·Michaël Mingueneau,Smita Krishnaswamy,Matthew H. Spitzer,Sean C. Bendall,Erica L. Stone,Stephen Μ. Hedrick,Dana Pe’er,Diane Mathis,Garry P. Nolan,Christophe Benoıst	2014	43
17	Conditional density-based analysis of T cell signaling in single-cell data Science ·Smita Krishnaswamy,Matthew H. Spitzer,Michaël Mingueneau,Sean C. Bendall,Oren Litvin,Erica L. Stone,Dana Pe’er,Garry P. Nolan	2014	139
18	RHPN2 Drives Mesenchymal Transformation in Malignant Glioma by Triggering RhoA Activation Cancer Research ·Carla Danussi,Uri David Akavia,Francesco Niola,Andreja Jović,Anna Lasorella,Dana Pe’er,Antonio Iavarone	2013	44
19	Normalization of mass cytometry data with bead standardsbreakdown → Cytometry Part A ·Rachel Finck,Erin F. Simonds,Astraea Jager,Smita Krishnaswamy,Karen Sachs,Wendy J. Fantl,Dana Pe’er,Garry P. Nolan,Sean C. Bendall	2013	462
20	MinReg: A Scalable Algorithm for Learning Parsimonious Regulatory Networks in Yeast and Mammals Journal of Machine Learning Research ·Dana Pe’er,Amos Tanay,Aviv Regev	2006	22

About Dana Pe’er

Dana Pe’er is a scholar working on Biophysics, Cancer Research, Immunology, Molecular Biology and Oncology, having authored 120 papers that have together received 23.2k indexed citations. Recurring topics across this work include Single-cell and spatial transcriptomics (47 papers), Cancer Genomics and Diagnostics (19 papers), Gene Regulatory Network Analysis (19 papers), Gene expression and cancer classification (16 papers), Cell Image Analysis Techniques (15 papers), Bioinformatics and Genomic Networks (15 papers), T-cell and B-cell Immunology (14 papers) and Immune Cell Function and Interaction (12 papers). The work is most often cited by research in Biophysics (2.0k citations), Immunology (6.1k citations), Molecular Biology (14.7k citations), Cancer Research (2.9k citations) and Oncology (5.0k citations). Dana Pe’er has collaborated with scholars based in United States, Israel and Canada. Frequent co-authors include Nir Friedman, Garry P. Nolan, Iftach Nachman, Michal Linial, Sean C. Bendall, Erin F. Simonds, Jacob Levine, Karen Sachs, Michelle D. Tadmor and El-ad David Amir. Their work appears in journals such as Cell, Nature Biotechnology, Cancer Research, Proceedings of the National Academy of Sciences and Nature.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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