Andrés Berdeja

1.7k total citations
21 papers, 1.3k citations indexed

About

Andrés Berdeja is a scholar working on Molecular Biology, Infectious Diseases and Organic Chemistry. According to data from OpenAlex, Andrés Berdeja has authored 21 papers receiving a total of 1.3k indexed citations (citations by other indexed papers that have themselves been cited), including 20 papers in Molecular Biology, 1 paper in Infectious Diseases and 1 paper in Organic Chemistry. Recurrent topics in Andrés Berdeja's work include DNA and Nucleic Acid Chemistry (15 papers), RNA Interference and Gene Delivery (12 papers) and Advanced biosensing and bioanalysis techniques (12 papers). Andrés Berdeja is often cited by papers focused on DNA and Nucleic Acid Chemistry (15 papers), RNA Interference and Gene Delivery (12 papers) and Advanced biosensing and bioanalysis techniques (12 papers). Andrés Berdeja collaborates with scholars based in United States, Australia and Switzerland. Andrés Berdeja's co-authors include Eric E. Swayze, Thazha P. Prakash, Punit P. Seth, Charles Allerson, Hans Gaus, Balkrishen Bhat, Michael T. Migawa, Namir Sioufi, Richard H. Griffey and Guillermo Vasquez and has published in prestigious journals such as Journal of the American Chemical Society, Nucleic Acids Research and Journal of Biological Chemistry.

In The Last Decade

Andrés Berdeja

21 papers receiving 1.3k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Andrés Berdeja United States	17	1.2k	176	68	67	47	21	1.3k
Namir Sioufi United States	8	896 0.7×	249 1.4×	69 1.0×	26 0.4×	48 1.0×	9	978
Yuko Nobe Japan	21	1.1k 0.9×	281 1.6×	39 0.6×	14 0.2×	39 0.8×	38	1.3k
Karsten Beckmann Germany	10	587 0.5×	124 0.7×	60 0.9×	54 0.8×	134 2.9×	13	929
Aaron D. Springer United States	4	607 0.5×	140 0.8×	63 0.9×	23 0.3×	33 0.7×	5	714
Aurélie Baguet France	14	821 0.7×	106 0.6×	42 0.6×	35 0.5×	190 4.0×	22	1.0k
Valérie Choesmel France	12	908 0.7×	86 0.5×	82 1.2×	40 0.6×	41 0.9×	15	1.1k
Niranjan B. Pandey United States	17	956 0.8×	71 0.4×	83 1.2×	125 1.9×	67 1.4×	23	1.2k
Thomas A. Bacon United States	7	670 0.5×	46 0.3×	76 1.1×	37 0.6×	77 1.6×	9	837
Pau Martín-Malpartida Spain	14	613 0.5×	73 0.4×	57 0.8×	33 0.5×	65 1.4×	35	795
L Truong United States	9	818 0.7×	87 0.5×	53 0.8×	18 0.3×	81 1.7×	9	978

Countries citing papers authored by Andrés Berdeja

Since Specialization

Citations

This map shows the geographic impact of Andrés Berdeja's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Andrés Berdeja with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Andrés Berdeja more than expected).

Fields of papers citing papers by Andrés Berdeja

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Andrés Berdeja. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Andrés Berdeja. The network helps show where Andrés Berdeja may publish in the future.

Co-authorship network of co-authors of Andrés Berdeja

This figure shows the co-authorship network connecting the top 25 collaborators of Andrés Berdeja. A scholar is included among the top collaborators of Andrés Berdeja based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Andrés Berdeja. Andrés Berdeja is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Prakash, Thazha P., Jinghua Yu, Wen Shen, et al.. (2021). Site-specific Incorporation of 2′,5′-Linked Nucleic Acids Enhances Therapeutic Profile of Antisense Oligonucleotides. ACS Medicinal Chemistry Letters. 12(6). 922–927. 12 indexed citations

Anderson, Brooke A., Graeme C. Freestone, Audrey Low, et al.. (2021). Towards next generation antisense oligonucleotides: mesylphosphoramidate modification improves therapeutic index and duration of effect of gapmer antisense oligonucleotides. Nucleic Acids Research. 49(16). 9026–9041. 89 indexed citations

Østergaard, Michael E., Cheryl Li De Hoyos, Wei Wan, et al.. (2020). Understanding the effect of controlling phosphorothioate chirality in the DNA gap on the potency and safety of gapmer antisense oligonucleotides. Nucleic Acids Research. 48(4). 1691–1700. 69 indexed citations

Chappell, Alfred E., Hans Gaus, Andrés Berdeja, et al.. (2020). Mechanisms of palmitic acid-conjugated antisense oligonucleotide distribution in mice. Nucleic Acids Research. 48(8). 4382–4395. 41 indexed citations

Wan, Wei, Michael T. Migawa, Guillermo Vasquez, et al.. (2014). Synthesis, biophysical properties and biological activity of second generation antisense oligonucleotides containing chiral phosphorothioate linkages. Nucleic Acids Research. 42(22). 13456–13468. 93 indexed citations

Østergaard, Michael E., Timothy A. Dwight, Andrés Berdeja, et al.. (2014). Comparison of Duplex Stabilizing Properties of 2′-Fluorinated Nucleic Acid Analogues with Furanose and Non-Furanose Sugar Rings. The Journal of Organic Chemistry. 79(18). 8877–8881. 20 indexed citations

Roca, Xavier, Martin Akerman, Hans Gaus, et al.. (2012). Widespread recognition of 5′ splice sites by noncanonical base-pairing to U1 snRNA involving bulged nucleotides. Genes & Development. 26(10). 1098–1109. 74 indexed citations

Lee, Sang Il, David L. Boyle, Andrés Berdeja, & Gary S. Firestein. (2012). Regulation of inflammatory arthritis by the upstream kinase mitogen activated protein kinase kinase 7 in the c-Jun N-Terminal kinase pathway. Arthritis Research & Therapy. 14(1). R38–R38. 24 indexed citations

Pallan, Pradeep S., Charles Allerson, Andrés Berdeja, et al.. (2012). Structure and nuclease resistance of 2′,4′-constrained 2′-O-methoxyethyl (cMOE) and 2′-O-ethyl (cEt) modified DNAs. Chemical Communications. 48(66). 8195–8195. 64 indexed citations

10.

Murray, Sue, Erich Koller, Andrés Berdeja, et al.. (2012). TricycloDNA-modified oligo-2′-deoxyribonucleotides reduce scavenger receptor B1 mRNA in hepatic and extra-hepatic tissues—a comparative study of oligonucleotide length, design and chemistry. Nucleic Acids Research. 40(13). 6135–6143. 70 indexed citations

11.

Seth, Punit P., Jinghua Yu, Charles Allerson, Andrés Berdeja, & Eric E. Swayze. (2011). Synthesis and biophysical characterization of R-6′-Me-α-l-LNA modified oligonucleotides. Bioorganic & Medicinal Chemistry Letters. 21(4). 1122–1125. 13 indexed citations

12.

Egli, Martin, Pradeep S. Pallan, Charles Allerson, et al.. (2011). Synthesis, Improved Antisense Activity and Structural Rationale for the Divergent RNA Affinities of 3′-Fluoro Hexitol Nucleic Acid (FHNA and Ara-FHNA) Modified Oligonucleotides. Journal of the American Chemical Society. 133(41). 16642–16649. 59 indexed citations

13.

Wancewicz, Edward V., Martin A. Maier, Andrew Siwkowski, et al.. (2010). Peptide Nucleic Acids Conjugated to Short Basic Peptides Show Improved Pharmacokinetics and Antisense Activity in Adipose Tissue. Journal of Medicinal Chemistry. 53(10). 3919–3926. 25 indexed citations

14.

Seth, Punit P., Charles Allerson, Andrés Berdeja, & Eric E. Swayze. (2010). Replacing the 2′-oxygen with an exocyclic methylene group reverses the stabilization effects of α-l-LNA. Bioorganic & Medicinal Chemistry Letters. 21(1). 588–591. 9 indexed citations

15.

Seth, Punit P., Charles Allerson, Andrés Berdeja, et al.. (2010). An Exocyclic Methylene Group Acts As a Bioisostere of the 2′-Oxygen Atom in LNA. Journal of the American Chemical Society. 132(42). 14942–14950. 69 indexed citations

16.

Seth, Punit P., Guillermo Vasquez, Andrés Berdeja, et al.. (2010). Synthesis and Biophysical Evaluation of 2′,4′-Constrained 2′O-Methoxyethyl and 2′,4′-Constrained 2′O-Ethyl Nucleic Acid Analogues. The Journal of Organic Chemistry. 75(5). 1569–1581. 164 indexed citations

17.

Lima, Walt F., Heather Murray, Josh G. Nichols, et al.. (2008). Human Dicer Binds Short Single-strand and Double-strand RNA with High Affinity and Interacts with Different Regions of the Nucleic Acids. Journal of Biological Chemistry. 284(4). 2535–2548. 35 indexed citations

18.

Tachas, George, Shari A. Lofthouse, Christopher J. Wraight, et al.. (2006). A GH receptor antisense oligonucleotide inhibits hepatic GH receptor expression, IGF-I production and body weight gain in normal mice. Journal of Endocrinology. 189(1). 147–154. 23 indexed citations

19.

Allerson, Charles, Namir Sioufi, Thazha P. Prakash, et al.. (2005). Fully 2‘-Modified Oligonucleotide Duplexes with Improved in Vitro Potency and Stability Compared to Unmodified Small Interfering RNA. Journal of Medicinal Chemistry. 48(4). 901–904. 346 indexed citations

20.

Robertson, Jacqueline L., et al.. (1996). Comparative Effect of Temperature and Time on Activity of Dipel 2X and MVP Preparations of Bacillus thuringiensis subs. kurstaki on Diamondback Moth (Lepidoptera: Plutellidae). Journal of Economic Entomology. 89(5). 1084–1087. 8 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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