Sofia A. Quinodoz

3.2k total citations · 2 hit papers
17 papers, 1.4k citations indexed

About

Sofia A. Quinodoz is a scholar working on Molecular Biology, Genetics and Plant Science. According to data from OpenAlex, Sofia A. Quinodoz has authored 17 papers receiving a total of 1.4k indexed citations (citations by other indexed papers that have themselves been cited), including 16 papers in Molecular Biology, 4 papers in Genetics and 3 papers in Plant Science. Recurrent topics in Sofia A. Quinodoz's work include RNA Research and Splicing (9 papers), Genomics and Chromatin Dynamics (9 papers) and RNA and protein synthesis mechanisms (7 papers). Sofia A. Quinodoz is often cited by papers focused on RNA Research and Splicing (9 papers), Genomics and Chromatin Dynamics (9 papers) and RNA and protein synthesis mechanisms (7 papers). Sofia A. Quinodoz collaborates with scholars based in United States, United Kingdom and Spain. Sofia A. Quinodoz's co-authors include Mitchell Guttman, Noah Ollikainen, Prashant Bhat, Amy Chow, Patrick McDonel, Joanna W. Jachowicz, Manuel Garber, Yodai Takei, J.M. Schmidt and Erik Aznauryan and has published in prestigious journals such as Nature, Cell and Nature Biotechnology.

In The Last Decade

Sofia A. Quinodoz

17 papers receiving 1.4k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus

2018 568 citations Sofia A. Quinodoz, Noah Ollikainen et al. Cell profile →
RNA promotes the formation of spatial compartments in the nucleus

2021 231 citations Sofia A. Quinodoz, Joanna W. Jachowicz et al. Cell profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Sofia A. Quinodoz United States	13	1.3k	372	239	129	43	17	1.4k
Pamela Russell United States	9	1.6k 1.3×	748 2.0×	194 0.8×	130 1.0×	50 1.2×	11	1.8k
Jorge Ruiz‐Orera Germany	16	971 0.7×	342 0.9×	115 0.5×	111 0.9×	50 1.2×	21	1.1k
Nahid Iglesias United States	18	1.6k 1.2×	169 0.5×	228 1.0×	52 0.4×	24 0.6×	25	1.7k
Karen J. Goodrich United States	20	1.9k 1.4×	673 1.8×	148 0.6×	112 0.9×	29 0.7×	22	2.0k
Graeme Bethel United Kingdom	4	808 0.6×	212 0.6×	103 0.4×	103 0.8×	34 0.8×	4	981
David C. Zappulla United States	16	1.2k 0.9×	117 0.3×	274 1.1×	109 0.8×	29 0.7×	26	1.4k
Iris Dror United States	15	1.6k 1.2×	110 0.3×	186 0.8×	341 2.6×	68 1.6×	25	1.7k
Serafin U. Colmenares United States	11	1.4k 1.1×	137 0.4×	565 2.4×	119 0.9×	29 0.7×	16	1.6k
Claus‐D. Kuhn Germany	11	1.0k 0.8×	230 0.6×	152 0.6×	77 0.6×	26 0.6×	14	1.1k
Xiaoyi Cao United States	13	917 0.7×	220 0.6×	90 0.4×	140 1.1×	44 1.0×	24	1.0k

Countries citing papers authored by Sofia A. Quinodoz

Since Specialization

Citations

This map shows the geographic impact of Sofia A. Quinodoz's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Sofia A. Quinodoz with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Sofia A. Quinodoz more than expected).

Fields of papers citing papers by Sofia A. Quinodoz

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Sofia A. Quinodoz. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Sofia A. Quinodoz. The network helps show where Sofia A. Quinodoz may publish in the future.

Co-authorship network of co-authors of Sofia A. Quinodoz

This figure shows the co-authorship network connecting the top 25 collaborators of Sofia A. Quinodoz. A scholar is included among the top collaborators of Sofia A. Quinodoz based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Sofia A. Quinodoz. Sofia A. Quinodoz is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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17 of 17 papers shown

Quinodoz, Sofia A., Troy J. Comi, Hongbo Zhao, et al.. (2025). Mapping and engineering RNA-driven architecture of the multiphase nucleolus. Nature. 644(8076). 557–566. 6 indexed citations

Kitchen, Sheila A., Adrian Brückner, Mark S. Ladinsky, et al.. (2024). The genomic and cellular basis of biosynthetic innovation in rove beetles. Cell. 187(14). 3563–3584.e26. 6 indexed citations

Bhat, Prashant, Amy Chow, Benjamin Emert, et al.. (2024). Genome organization around nuclear speckles drives mRNA splicing efficiency. Nature. 629(8014). 1165–1173. 51 indexed citations

Riback, Joshua A., Jorine M. Eeftens, Daniel S.W. Lee, et al.. (2023). Viscoelasticity and advective flow of RNA underlies nucleolar form and function. Molecular Cell. 83(17). 3095–3107.e9. 44 indexed citations

Quinodoz, Sofia A., Prashant Bhat, Peter Chovanec, et al.. (2022). SPRITE: a genome-wide method for mapping higher-order 3D interactions in the nucleus using combinatorial split-and-pool barcoding. Nature Protocols. 17(1). 36–75. 32 indexed citations

Boninsegna, Lorenzo, Aslı Yıldırım, Sofia A. Quinodoz, et al.. (2022). Integrative genome modeling platform reveals essentiality of rare contact events in 3D genome organizations. Nature Methods. 19(8). 938–949. 25 indexed citations

Goronzy, Isabel N., Sofia A. Quinodoz, Joanna W. Jachowicz, et al.. (2022). Simultaneous mapping of 3D structure and nascent RNAs argues against nuclear compartments that preclude transcription. Cell Reports. 41(9). 111730–111730. 14 indexed citations

Jachowicz, Joanna W., Noah Ollikainen, Matthew S. Curtis, et al.. (2021). Single-cell measurement of higher-order 3D genome organization with scSPRITE. Nature Biotechnology. 40(1). 64–73. 75 indexed citations

Quinodoz, Sofia A., Joanna W. Jachowicz, Prashant Bhat, et al.. (2021). RNA promotes the formation of spatial compartments in the nucleus. Cell. 184(23). 5775–5790.e30. 231 indexed citations breakdown →

10.

Quinodoz, Sofia A. & Mitchell Guttman. (2021). Essential Roles for RNA in Shaping Nuclear Organization. Cold Spring Harbor Perspectives in Biology. 14(5). a039719–a039719. 20 indexed citations

11.

Vangala, Pranitha, Sofia A. Quinodoz, Kyle Gellatly, et al.. (2020). High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen Detection. Molecular Cell. 80(2). 359–373.e8. 22 indexed citations

12.

Quinodoz, Sofia A., Noah Ollikainen, Barbara Tabak, et al.. (2018). Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus. Cell. 174(3). 744–757.e24. 568 indexed citations breakdown →

13.

Park, Jin Hyoung, Yihan Lin, Sahand Hormoz, et al.. (2018). Molecular Time Sharing through Dynamic Pulsing in Single Cells. Cell Systems. 6(2). 216–229.e15. 26 indexed citations

14.

Quinodoz, Sofia A. & Mitchell Guttman. (2014). Long noncoding RNAs: an emerging link between gene regulation and nuclear organization. Trends in Cell Biology. 24(11). 651–663. 257 indexed citations

15.

Kessel, Julia C. van, Steven T. Rutherford, Jian-Ping Cong, et al.. (2014). Quorum Sensing Regulates the Osmotic Stress Response in Vibrio harveyi. Journal of Bacteriology. 197(1). 73–80. 38 indexed citations

16.

Thomas, Michael A., et al.. (2012). Size Matters!. Journal of Statistical Physics. 148(4). 664–676. 6 indexed citations

17.

Quinodoz, Sofia A., et al.. (2011). The More the Merrier?. Journal of Statistical Physics. 142(6). 1324–1336. 7 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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