Jonathan Y. Hsu

14.2k citations

16 papers · 2.1k indexed · 3 hit papers · h-index 13

Impact in

Aging top 2%
Business and International Management top 1%
- Innovation and Socioeconomic Development

Papers in

Co-authors: J. Keith Joung Luca Pinello Joy E. Horng Martin J. Aryee Benjamin P. Kleinstiver Y. Esther Tak David R. Liu Max W. Shen
Journals: Nature Biotechnology (4 papers)Nature Communications (3 papers)Nature Genetics (2 papers)Nature Methods (1 paper)Current Biology (1 paper)
Partner nations: United States China Canada

In The Last Decade

Jonathan Y. Hsu

16 papers receiving 2.1k citations

Hit Papers

align trajectories log scale

CRISPR prime editing with ribonucleoprotein complexes in zebrafish and primary human cells 2021 · 150 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2021 Nature Biotechnology
2019 Nature Biotechnology
2018 Nature

Peers

Countries citing papers authored by Jonathan Y. Hsu

Since Specialization

Citations

This map shows the geographic impact of Jonathan Y. Hsu's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jonathan Y. Hsu with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jonathan Y. Hsu more than expected).

Fields of papers citing papers by Jonathan Y. Hsu

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jonathan Y. Hsu. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jonathan Y. Hsu. The network helps show where Jonathan Y. Hsu may publish in the future.

Co-authors

The 25 scholars most cited alongside Jonathan Y. Hsu, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Jonathan Y. Hsu Line = papers co-authored together Jonathan Y. Hsu links everyone, so they are left out of the graph.

All Works

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16 of 16 papers shown

#	Work
1	Human-specific regulation of neural maturation identified by cross-primate transcriptomics Current Biology ·Sara B. Linker, Iñigo Narvaiza, Jonathan Y. Hsu, Meiyan Wang, Fan Qiu, Ana P. D. Mendes, Ruth Oefner, Kalyani Kottilil, Amandeep Sharma, Lynne Randolph‐Moore, Eunice Mejia, Renata Santos, Maria C. Marchetto, Fred H. Gage	2022	13
2	Author Correction: Transcription factor competition at the γ-globin promoters controls hemoglobin switching Nature Genetics ·Nan Liu, Shuqian Xu, Qiuming Yao, Qian Zhu, Kai Yan, Jonathan Y. Hsu, Phraew Sakon, Luca Pinello, Guo‐Cheng Yuan, Daniel E. Bauer, Stuart H. Orkin	2021	2
3	Transcription factor competition at the γ-globin promoters controls hemoglobin switching Nature Genetics ·Nan Liu, Shuqian Xu, Qiuming Yao, Qian Zhu, Kai Yan, Jonathan Y. Hsu, Phraew Sakon, Luca Pinello, Guo‐Cheng Yuan, Daniel E. Bauer, Stuart H. Orkin	2021	57
4	Scalable characterization of the PAM requirements of CRISPR–Cas enzymes using HT-PAMDA Nature Protocols ·Russell T. Walton, Jonathan Y. Hsu, J. Keith Joung, Benjamin P. Kleinstiver	2021	28
5	PrimeDesign software for rapid and simplified design of prime editing guide RNAs Nature Communications ·Jonathan Y. Hsu, Julian Grünewald, Regan N. Szalay, Justine Shih, Andrew V. Anzalone, Kin Chung Lam, Max W. Shen, Karl Petri, David R. Liu, J. Keith Joung, Luca Pinello	2021	130
6	CRISPR prime editing with ribonucleoprotein complexes in zebrafish and primary human cells Nature Biotechnology ·Karl Petri, Weiting Zhang, Junyan Ma, Andrea Schmidts, Hyunho Lee, Joy E. Horng, Daniel Y. Kim, Ibrahim Cagri Kurt, Kendell Clement, Jonathan Y. Hsu, Luca Pinello, Marcela V. Maus, J. Keith Joung, Jing-Ruey Joanna Yeh Hit paper breakdown →	2021	150
7	A dual-deaminase CRISPR base editor enables concurrent adenine and cytosine editing Nature Biotechnology ·Julian Grünewald, Ronghao Zhou, Caleb A. Lareau, Sara P. Garcia, Sowmya Iyer, Bret R. Miller, Lukas M. Langner, Jonathan Y. Hsu, Martin J. Aryee, J. Keith Joung	2020	190
8	Publisher Correction: Engineered CRISPR–Cas12a variants with increased activities and improved targeting ranges for gene, epigenetic and base editing Nature Biotechnology ·Benjamin P. Kleinstiver, Alexander A. Sousa, Russell T. Walton, Y. Esther Tak, Jonathan Y. Hsu, Kendell Clement, Moira M. Welch, Joy E. Horng, Jose Malagon-Lopez, Irene Scarfò, Marcela V. Maus, Luca Pinello, Martin J. Aryee, J. Keith Joung	2020	6
9	Technologies and Computational Analysis Strategies for CRISPR Applications Molecular Cell ·Kendell Clement, Jonathan Y. Hsu, Matthew C. Canver, J. Keith Joung, Luca Pinello	2020	27
10	Engineered CRISPR–Cas12a variants with increased activities and improved targeting ranges for gene, epigenetic and base editing Nature Biotechnology ·Benjamin P. Kleinstiver, Alexander A. Sousa, Russell T. Walton, Y. Esther Tak, Jonathan Y. Hsu, Kendell Clement, Moira M. Welch, Joy E. Horng, Jose Malagon-Lopez, Irene Scarfò, Marcela V. Maus, Luca Pinello, Martin J. Aryee, J. Keith Joung Hit paper breakdown →	2019	453
11	Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM Nature Communications ·Huidong Chen, Luca Albergante, Jonathan Y. Hsu, Caleb A. Lareau, Giosuè Lo Bosco, Jihong Guan, Shuigeng Zhou, Alexander N. Gorban, Daniel E. Bauer, Martin J. Aryee, David M. Langenau, Andreï Zinovyev, Jason D. Buenrostro, Guo‐Cheng Yuan, Luca Pinello	2019	161
12	BrainImageR: spatiotemporal gene set analysis referencing the human brain Bioinformatics ·Sara B. Linker, Jonathan Y. Hsu, Adela Pfaff, Debha N. Amatya, Shu-Meng Ko, Sarah Voter, Quinn Wong, Fred H. Gage	2018	6
13	Predictable and precise template-free CRISPR editing of pathogenic variants Nature ·Max W. Shen, Mandana Arbab, Jonathan Y. Hsu, Daniel Worstell, Sannie J. Culbertson, Olga Krabbe, Christopher A. Cassa, David R. Liu, David K. Gifford, Richard I. Sherwood Hit paper breakdown →	2018	380
14	Inducible and multiplex gene regulation using CRISPR–Cpf1-based transcription factors Nature Methods ·Y. Esther Tak, Benjamin P. Kleinstiver, James K. Nuñez, Jonathan Y. Hsu, Joy E. Horng, Jingyi Gong, Jonathan S. Weissman, J. Keith Joung	2017	160
15	Nup153 Interacts with Sox2 to Enable Bimodal Gene Regulation and Maintenance of Neural Progenitor Cells Cell stem cell ·Tomohisa Toda, Jonathan Y. Hsu, Sara B. Linker, Lauren Hu, Simon T. Schafer, Jérôme Mertens, Filipe V. Jacinto, Martin W. Hetzer, Fred H. Gage	2017	90
16	Nuclear RNA-seq of single neurons reveals molecular signatures of activation Nature Communications ·Benjamin Lacar, Sara B. Linker, Baptiste N. Jaeger, Suguna Rani Krishnaswami, Jerika J. Barron, Martijn J. E. Kelder, Sarah Parylak, Apuã C.M. Paquola, Pratap Venepally, Mark Novotny, Carolyn O’Connor, Conor Fitzpatrick, Jennifer A. Erwin, Jonathan Y. Hsu, David Husband, Michael J. McConnell, Roger S. Lasken, Fred H. Gage	2016	278

About Jonathan Y. Hsu

Jonathan Y. Hsu is a scholar working on Aging, Business and International Management, Molecular Biology, Genetics and Insect Science, having authored 16 papers that have together received 2.1k indexed citations. Recurring topics across this work include CRISPR and Genetic Engineering (9 papers), RNA and protein synthesis mechanisms (5 papers), Single-cell and spatial transcriptomics (4 papers), RNA regulation and disease (3 papers), Advanced biosensing and bioanalysis techniques (2 papers), Hemoglobinopathies and Related Disorders (2 papers), Insect symbiosis and bacterial influences (2 papers) and RNA modifications and cancer (2 papers). The work is most often cited by research in Aging (137 citations), Business and International Management (152 citations), Molecular Biology (2.0k citations), Developmental Neuroscience (60 citations) and Genetics (385 citations). Jonathan Y. Hsu has collaborated with scholars based in United States, China and Canada. Frequent co-authors include J. Keith Joung, Luca Pinello, Joy E. Horng, Martin J. Aryee, Benjamin P. Kleinstiver, Y. Esther Tak, David R. Liu, Max W. Shen, Kendell Clement and Marcela V. Maus. Their work appears in journals such as Nature Biotechnology, Nature Communications, Nature Genetics, Nature Methods and Current Biology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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