Janne Nikkilä

6.5k total citations · 2 hit papers
38 papers, 4.6k citations indexed

About

Janne Nikkilä is a scholar working on Molecular Biology, Food Science and Infectious Diseases. According to data from OpenAlex, Janne Nikkilä has authored 38 papers receiving a total of 4.6k indexed citations (citations by other indexed papers that have themselves been cited), including 29 papers in Molecular Biology, 8 papers in Food Science and 7 papers in Infectious Diseases. Recurrent topics in Janne Nikkilä's work include Gut microbiota and health (17 papers), Gene expression and cancer classification (9 papers) and Probiotics and Fermented Foods (8 papers). Janne Nikkilä is often cited by papers focused on Gut microbiota and health (17 papers), Gene expression and cancer classification (9 papers) and Probiotics and Fermented Foods (8 papers). Janne Nikkilä collaborates with scholars based in Finland, Netherlands and United States. Janne Nikkilä's co-authors include Willem M. de Vos, Reetta Satokari, Lotta Nylund, Airi Palva, Marco Candela, Laura Bucci, Elena Biagi, Claudio Franceschi, Elisa Pini and Rita Ostan and has published in prestigious journals such as Bioinformatics, PLoS ONE and Oncogene.

In The Last Decade

Janne Nikkilä

38 papers receiving 4.4k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Through Ageing, and Beyond: Gut Microbiota and Inflammatory Status in Seniors and Centenarians

2010 1.1k citations Lotta Nylund, Janne Nikkilä et al. PLoS ONE profile →
Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

2009 723 citations Marcus J. Claesson, Órla O’Sullivan et al. PLoS ONE profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Janne Nikkilä Finland	26	3.0k	1.1k	735	618	518	38	4.6k
Matthias Scholz Italy	27	2.8k 0.9×	617 0.6×	482 0.7×	637 1.0×	345 0.7×	46	5.4k
Timothy L. Tickle United States	14	3.9k 1.3×	850 0.8×	967 1.3×	610 1.0×	373 0.7×	21	5.3k
Fredrik Karlsson Sweden	19	4.2k 1.4×	2.2k 2.1×	700 1.0×	462 0.7×	392 0.8×	28	5.3k
Julien Tap France	20	3.9k 1.3×	1.7k 1.6×	881 1.2×	765 1.2×	821 1.6×	38	5.3k
Georg K. Gerber United States	29	3.3k 1.1×	739 0.7×	769 1.0×	410 0.7×	235 0.5×	56	5.3k
Marion Leclerc France	30	4.1k 1.4×	943 0.9×	997 1.4×	950 1.5×	412 0.8×	53	5.8k
Robert T. DeBoy United States	16	3.5k 1.2×	701 0.6×	616 0.8×	734 1.2×	251 0.5×	17	4.9k
Xiaoyan Pang China	28	4.5k 1.5×	1.9k 1.8×	847 1.2×	710 1.1×	331 0.6×	49	5.8k
Georg Zeller Germany	35	4.7k 1.6×	723 0.7×	863 1.2×	572 0.9×	294 0.6×	71	6.5k

Countries citing papers authored by Janne Nikkilä

Since Specialization

Citations

This map shows the geographic impact of Janne Nikkilä's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Janne Nikkilä with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Janne Nikkilä more than expected).

Fields of papers citing papers by Janne Nikkilä

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Janne Nikkilä. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Janne Nikkilä. The network helps show where Janne Nikkilä may publish in the future.

Co-authorship network of co-authors of Janne Nikkilä

This figure shows the co-authorship network connecting the top 25 collaborators of Janne Nikkilä. A scholar is included among the top collaborators of Janne Nikkilä based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Janne Nikkilä. Janne Nikkilä is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Wacklin, Pirjo, Jarno Tuimala, Janne Nikkilä, et al.. (2014). Faecal Microbiota Composition in Adults Is Associated with the FUT2 Gene Determining the Secretor Status. PLoS ONE. 9(4). e94863–e94863. 122 indexed citations

Peräsaari, Juha, Ville Saarela, Janne Nikkilä, et al.. (2013). HLA associations with tubulointerstitial nephritis with or without uveitis in Finnish pediatric population: a nation‐wide study. Tissue Antigens. 81(6). 435–441. 22 indexed citations

Nylund, Lotta, Reetta Satokari, Janne Nikkilä, et al.. (2013). Microarray analysis reveals marked intestinal microbiota aberrancy in infants having eczema compared to healthy children in at-risk for atopic disease. BMC Microbiology. 13(1). 12–12. 117 indexed citations

Mäkivuokko, Harri, Sampo J. Lahtinen, Pirjo Wacklin, et al.. (2012). Association between the ABO blood group and the human intestinal microbiota composition. BMC Microbiology. 12(1). 94–94. 85 indexed citations

Kilpinen, Lotta, Feven Tigistu‐Sahle, Dario Greco, et al.. (2012). Aging bone marrow mesenchymal stromal cells have altered membrane glycerophospholipid composition and functionality. Journal of Lipid Research. 54(3). 622–635. 65 indexed citations

Wacklin, Pirjo, Harri Mäkivuokko, Noora Alakulppi, et al.. (2011). Secretor Genotype (FUT2 gene) Is Strongly Associated with the Composition of Bifidobacteria in the Human Intestine. PLoS ONE. 6(5). e20113–e20113. 212 indexed citations

Forssten, Sofia D., Nuria Salazar, Patricia López, et al.. (2011). Influence of a Probiotic Milk Drink, Containing Lactobacillus Paracasei Lpc-37, on Immune Function and Gut Microbiota in Elderly Subjects. DIGITAL.CSIC (Spanish National Research Council (CSIC)). 1(3). 159–172. 9 indexed citations

Jalanka, Jonna, Anne Salonen, Janne Nikkilä, et al.. (2011). Intestinal Microbiota in Healthy Adults: Temporal Analysis Reveals Individual and Common Core and Relation to Intestinal Symptoms. PLoS ONE. 6(7). e23035–e23035. 261 indexed citations

Sysi‐Aho, Marko, Peddinti Gopalacharyulu, Abhishek Tripathi, et al.. (2011). Metabolic Regulation in Progression to Autoimmune Diabetes. PLoS Computational Biology. 7(10). e1002257–e1002257. 72 indexed citations

10.

Lyra, Anna, Lotta Krogius-Kurikka, Janne Nikkilä, et al.. (2010). Effect of a multispecies probiotic supplement on quantity of irritable bowel syndrome-related intestinal microbial phylotypes. BMC Gastroenterology. 10(1). 110–110. 59 indexed citations

11.

Salonen, Anne, Janne Nikkilä, Jonna Jalanka, et al.. (2010). Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis. Journal of Microbiological Methods. 81(2). 127–134. 450 indexed citations

12.

Nikkilä, Janne & Willem M. de Vos. (2010). Advanced Approaches to Characterize the Human Intestinal Microbiota by Computational Meta-analysis. Journal of Clinical Gastroenterology. 44(Supplement 1). S2–S5. 10 indexed citations

13.

Suvitaival, Tommi, et al.. (2010). Multivariate multi-way analysis of multi-source data. Bioinformatics. 26(12). i391–i398. 28 indexed citations

14.

Claesson, Marcus J., Órla O’Sullivan, Qiong Wang, et al.. (2009). Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine. PLoS ONE. 4(8). e6669–e6669. 723 indexed citations breakdown →

15.

Nikkilä, Janne, Dylan Morrissey, Katri Pylkäs, et al.. (2009). Familial breast cancer screening reveals an alteration in the RAP80 UIM domain that impairs DNA damage response function. Oncogene. 28(16). 1843–1852. 55 indexed citations

16.

Nikkilä, Janne. (2005). Exploratory cluster analysis of genomic high-throughput data sets and their dependencies. Aaltodoc (Aalto University). 3 indexed citations

17.

Kaski, Samuel, Janne Nikkilä, Janne Sinkkonen, et al.. (2005). Associative Clustering for Exploring Dependencies between Functional Genomics Data Sets. IEEE/ACM Transactions on Computational Biology and Bioinformatics. 2(3). 203–216. 18 indexed citations

18.

Kaski, Samuel, Janne Nikkilä, Merja Oja, et al.. (2003). Trustworthiness and metrics in visualizing similarity of gene expression. BMC Bioinformatics. 4(1). 48–48. 97 indexed citations

19.

Kaski, Samuel, Janne Nikkilä, & Teuvo Kohonen. (1998). Methods for Interpreting a Self-Organized Map in Data Analysis. The European Symposium on Artificial Neural Networks. 185–190. 58 indexed citations

20.

Kinnunen, Paavo K.J., et al.. (1980). Activities of post‐heparin plasma lipoprotein lipase and hepatic lipase during pregnancy and lactation. European Journal of Clinical Investigation. 10(6). 469–474. 40 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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