Jan Philipp Junker

3.8k total citations · 1 hit paper
41 papers, 2.4k citations indexed

About

Jan Philipp Junker is a scholar working on Molecular Biology, Cell Biology and Atomic and Molecular Physics, and Optics. According to data from OpenAlex, Jan Philipp Junker has authored 41 papers receiving a total of 2.4k indexed citations (citations by other indexed papers that have themselves been cited), including 34 papers in Molecular Biology, 8 papers in Cell Biology and 7 papers in Atomic and Molecular Physics, and Optics. Recurrent topics in Jan Philipp Junker's work include Single-cell and spatial transcriptomics (15 papers), Force Microscopy Techniques and Applications (7 papers) and Congenital heart defects research (7 papers). Jan Philipp Junker is often cited by papers focused on Single-cell and spatial transcriptomics (15 papers), Force Microscopy Techniques and Applications (7 papers) and Congenital heart defects research (7 papers). Jan Philipp Junker collaborates with scholars based in Germany, Netherlands and United States. Jan Philipp Junker's co-authors include Alexander van Oudenaarden, Matthias Rief, Bastiaan Spanjaard, Fabian Ziegler, Pedro Olivares‐Chauvet, Bo Hu, Nikolay Ninov, Sharan Janjuha, Jeroen Bakkers and Eugène Berezikov and has published in prestigious journals such as Science, Cell and Proceedings of the National Academy of Sciences.

In The Last Decade

Jan Philipp Junker

41 papers receiving 2.4k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Simultaneous lineage tracing and cell-type identification using CRISPR–Cas9-induced genetic scars

2018 350 citations Bastiaan Spanjaard, Bo Hu et al. Nature Biotechnology profile →

Peers

Countries citing papers authored by Jan Philipp Junker

Since Specialization

Citations

This map shows the geographic impact of Jan Philipp Junker's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jan Philipp Junker with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jan Philipp Junker more than expected).

Fields of papers citing papers by Jan Philipp Junker

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jan Philipp Junker. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jan Philipp Junker. The network helps show where Jan Philipp Junker may publish in the future.

Co-authorship network of co-authors of Jan Philipp Junker

This figure shows the co-authorship network connecting the top 25 collaborators of Jan Philipp Junker. A scholar is included among the top collaborators of Jan Philipp Junker based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jan Philipp Junker. Jan Philipp Junker is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Antigen presentation plays positive roles in the regenerative response to cardiac injury in zebrafish 2024 ·Nature Communications ·João Cardeira-da-Silva, (unknown), (unknown), (unknown), (unknown), Stefan Günther, Radhan Ramadass, Michail Yekelchyk, Jens Preussner, Mario Looso, Jan Philipp Junker, Didier Y. R. Stainier	9
2	A single-cell atlas of de novo β-cell regeneration reveals the contribution of hybrid β/δ-cells to diabetes recovery in zebrafish 2022 ·Development ·Sumeet Pal Singh, (unknown), (unknown), (unknown), Luis Fernando Delgadillo-Silva, Bastiaan Spanjaard, (unknown), Sharan Janjuha, Pedro Olivares‐Chauvet, (unknown), Fabian Rost, (unknown), (unknown), A. Petzold, Thomas Kurth, Susanne Reinhardt, Jan Philipp Junker, Nikolay Ninov	23
3	Long-term imaging reveals behavioral plasticity during C. elegans dauer exit 2022 ·BMC Biology ·Friedrich Preußer, (unknown), Jan Philipp Junker, Nikolaus Rajewsky, Stephan Preibisch	2
4	Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos 2022 ·Cell Genomics ·(unknown), Wolfgang Kopp, (unknown), (unknown), Rieke Kempfer, Antje Hirsekorn, Ilija Bilić, Marine Gil, Alexandra Trinks, (unknown), Daniela Panáková, Ana Pombo, Altuna Akalin, Jan Philipp Junker, Didier Y. R. Stainier, David Garfield, Uwe Ohler, Scott A. Lacadie	11
5	A single‐cell RNA labeling strategy for measuring stress response upon tissue dissociation 2022 ·Molecular Systems Biology ·(unknown), (unknown), (unknown), Pedro Olivares‐Chauvet, Thomas Conrad, Michael Gotthardt, Helmut Kettenmann, Jan Philipp Junker	16
6	Detouring the roadblocks in gene expression 2019 ·Nature Reviews Molecular Cell Biology ·Jan Philipp Junker	3
7	Simultaneous lineage tracing and cell-type identification using CRISPR–Cas9-induced genetic scars breakdown → 2018 ·Nature Biotechnology ·Bastiaan Spanjaard, Bo Hu, (unknown), Pedro Olivares‐Chauvet, Sharan Janjuha, Nikolay Ninov, Jan Philipp Junker	350
8	Spatial Transcriptomics of C. elegans Males and Hermaphrodites Identifies Sex-Specific Differences in Gene Expression Patterns 2018 ·Developmental Cell ·(unknown), Ábel Vértesy, Marco C. Betist, Bastiaan Spanjaard, Jan Philipp Junker, Eugène Berezikov, Alexander van Oudenaarden, Hendrik C. Korswagen	46
9	Methods for lineage tracing on the organism-wide level 2017 ·Current Opinion in Cell Biology ·Bastiaan Spanjaard, Jan Philipp Junker	24
10	Ascl2 Acts as an R-spondin/Wnt-Responsive Switch to Control Stemness in Intestinal Crypts 2015 ·Cell stem cell ·Jurian Schuijers, Jan Philipp Junker, Michal Mokrý, Pantelis Hatzis, Bon‐Kyoung Koo, Valentina Sasselli, Laurens G. van der Flier, Edwin Cuppen, Alexander van Oudenaarden, Hans Clevers	193
11	Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration 2015 ·Developmental Cell ·Chi Wu, Fabian Kruse, (unknown), Jan Philipp Junker, David C. Zebrowski, Kristin Fischer, Emily S. Noël, Dominic Grün, Eugène Berezikov, Felix B. Engel, Alexander van Oudenaarden, Gilbert Weidinger, Jeroen Bakkers	149
12	A Gene Regulatory Program for Meiotic Prophase in the Fetal Ovary 2015 ·PLoS Genetics ·Y. Q. Shirleen Soh, Jan Philipp Junker, Mark E. Gill, Jacob L. Mueller, Alexander van Oudenaarden, David C. Page	90
13	DAZL regulates Tet1 translation in murine embryonic stem cells 2015 ·EMBO Reports ·Maaike Welling, (unknown), Javier Muñoz, Michael U. Musheev, Lennart Kester, Jan Philipp Junker, Nikolai Mischerikow, Mandana Arbab, Ewart Kuijk, Lev Silberstein, Peter V. Kharchenko, Mieke Geens, Christof Niehrs, H. Van de Velde, Alexander van Oudenaarden, Albert J. R. Heck, Niels Geijsen	19
14	Every Cell Is Special: Genome-wide Studies Add a New Dimension to Single-Cell Biology 2014 ·Cell ·Jan Philipp Junker, Alexander van Oudenaarden	153
15	A Predictive Model of Bifunctional Transcription Factor Signaling during Embryonic Tissue Patterning 2014 ·Developmental Cell ·Jan Philipp Junker, Kevin A. Peterson, Yuichi Nishi, Junhao Mao, Andrew McMahon, Alexander van Oudenaarden	26
16	Genome-wide RNA Tomography in the Zebrafish Embryo 2014 ·Cell ·Jan Philipp Junker, Emily S. Noël, Victor Guryev, Kevin A. Peterson, Gopi Shah, Jan Huisken, Andrew McMahon, Eugène Berezikov, Jeroen Bakkers, Alexander van Oudenaarden	226
17	Single-molecule mRNA detection and counting in mammalian tissue 2013 ·Nature Protocols ·Anna Lyubimova, Shalev Itzkovitz, Jan Philipp Junker, Zi Peng Fan, Xuebing Wu, Alexander van Oudenaarden	143
18	Cysteine engineering of polyproteins for single-molecule force spectroscopy 2006 ·Nature Protocols ·Hendrik Dietz, Morten Bertz, Michael Schlierf, Felix Berkemeier, Thomas Bornschlögl, Jan Philipp Junker, Matthias Rief	64
19	Response to the Comment by Ainavarapu et al. 2006 ·Biophysical Journal ·Matthias Rief, Jan Philipp Junker, Michael Schlierf, Kai Hell, Walter Neupert	3
20	Influence of Substrate Binding on the Mechanical Stability of Mouse Dihydrofolate Reductase 2005 ·Biophysical Journal ·Jan Philipp Junker, Kai Hell, Michael Schlierf, Walter Neupert, Matthias Rief	44

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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