Altuna Akalin

11.1k total citations · 2 hit papers
61 papers, 4.4k citations indexed

About

Altuna Akalin is a scholar working on Molecular Biology, Cancer Research and Immunology. According to data from OpenAlex, Altuna Akalin has authored 61 papers receiving a total of 4.4k indexed citations (citations by other indexed papers that have themselves been cited), including 49 papers in Molecular Biology, 12 papers in Cancer Research and 10 papers in Immunology. Recurrent topics in Altuna Akalin's work include RNA and protein synthesis mechanisms (14 papers), RNA Research and Splicing (14 papers) and RNA modifications and cancer (12 papers). Altuna Akalin is often cited by papers focused on RNA and protein synthesis mechanisms (14 papers), RNA Research and Splicing (14 papers) and RNA modifications and cancer (12 papers). Altuna Akalin collaborates with scholars based in Germany, United States and Norway. Altuna Akalin's co-authors include Christopher E. Mason, Ari Melnick, Sheng Li, Francine E. Garrett-Bakelman, Matthías Kormáksson, María E. Figueroa, Vedran Franke, Dirk Schübeler, C Wirbelauer and Juliane Schmidt and has published in prestigious journals such as Nature, Cell and Proceedings of the National Academy of Sciences.

In The Last Decade

Altuna Akalin

60 papers receiving 4.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

2012 1.4k citations Altuna Akalin et al. Genome biology profile →
Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation

2015 472 citations Altuna Akalin et al. profile →

Peers

Countries citing papers authored by Altuna Akalin

Since Specialization

Citations

This map shows the geographic impact of Altuna Akalin's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Altuna Akalin with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Altuna Akalin more than expected).

Fields of papers citing papers by Altuna Akalin

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Altuna Akalin. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Altuna Akalin. The network helps show where Altuna Akalin may publish in the future.

Co-authorship network of co-authors of Altuna Akalin

This figure shows the co-authorship network connecting the top 25 collaborators of Altuna Akalin. A scholar is included among the top collaborators of Altuna Akalin based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Altuna Akalin. Altuna Akalin is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Title	Journal	Authors	Indexed citations
1	Herpesviruses mimic zygotic genome activation to promote viral replication	Nature Communications	Eva Neugebauer, Stephanie Wälter et al.	3
2	Leveraging large language models for data analysis automation	PLoS ONE	Altuna Akalin et al.	4
3	Cytosolic nucleic acid sensors and interferon beta-1 activation drive radiation-induced anti-tumour immune effects in human pancreatic cancer cells	Frontiers in Immunology	Sylvia Gruber, Bernhard Kratzer et al.	1
4	Pathogenic mutations of human phosphorylation sites affect protein–protein interactions	Nature Communications	Yvette Roske, Bora Uyar et al.	9
5	Acute myocardial infarction leads to distinct sex differences in the coding transcriptome of human monocytes with a potential impact in disease aetiopathology	European Heart Journal	Adelheid Kratzer, Héctor Giral et al.	1
6	The SPOC proteins DIDO3 and PHF3 co-regulate gene expression and neuronal differentiation	Nature Communications	Vedran Franke, Melania Bruno et al.	1
7	Cardiovascular disease biomarkers derived from circulating cell-free DNA methylation	NAR Genomics and Bioinformatics	Rafael R. C. Cuadrat, Adelheid Kratzer et al.	12
8	The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators	Nature Communications	Vedran Franke, Irina Grishkovskaya et al.	15
9	Simultaneous dimensionality reduction and integration for single-cell ATAC-seq data using deep learning	Nature Machine Intelligence	Wolfgang Kopp, Altuna Akalin et al.	19
10	Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos	Cell Genomics	Wolfgang Kopp, Rieke Kempfer et al.	11
11	Lymphocyte access to lymphoma is impaired by high endothelial venule regression	Cell Reports	Lutz Menzel, Vedran Franke et al.	12
12	Transcriptional repression of NFKBIA triggers constitutive IKK‐ and proteasome‐independent p65/RelA activation in senescence	The EMBO Journal	Marina Kolesnichenko, Uta E. Höpken et al.	51
13	PDGFA-associated protein 1 protects mature B lymphocytes from stress-induced cell death and promotes antibody gene diversification	The Journal of Experimental Medicine	Sandhya Balasubramanian, Marieta Cagánová et al.	7
14	Functional interplay of Epstein-Barr virus oncoproteins in a mouse model of B cell lymphomagenesis	Proceedings of the National Academy of Sciences	Thomas Sommermann, Tomoharu Yasuda et al.	21
15	Single-cell analyses of aging, inflammation and senescence	Ageing Research Reviews	Bora Uyar, Daniel H. Palmer et al.	134
16	The conserved histone chaperone LIN‐53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans	Aging Cell	Bora Uyar, Stefan Kempa et al.	18
17	Global identification of functional microRNA-mRNA interactions in Drosophila	Nature Communications	Hans‐Hermann Wessels, Svetlana Lebedeva et al.	36
18	PiGx: reproducible genomics analysis pipelines with GNU Guix	GigaScience	Ricardo Wurmus, Bora Uyar et al.	36
19	Promoter architecture of mouse olfactory receptor genes	Genome Research	Charles Plessy, Giovanni Pascarella et al.	48
20	Transcriptional features of genomic regulatory blocks	Genome biology	Altuna Akalin, David Fredman et al.	75

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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