David U. Gorkin

14.0k total citations · 4 hit papers
20 papers, 2.8k citations indexed

About

David U. Gorkin is a scholar working on Molecular Biology, Genetics and Surgery. According to data from OpenAlex, David U. Gorkin has authored 20 papers receiving a total of 2.8k indexed citations (citations by other indexed papers that have themselves been cited), including 17 papers in Molecular Biology, 5 papers in Genetics and 4 papers in Surgery. Recurrent topics in David U. Gorkin's work include Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (5 papers) and Epigenetics and DNA Methylation (4 papers). David U. Gorkin is often cited by papers focused on Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (5 papers) and Epigenetics and DNA Methylation (4 papers). David U. Gorkin collaborates with scholars based in United States, Belgium and Germany. David U. Gorkin's co-authors include Bing Ren, Jesse R. Dixon, Danny Leung, Dongwon Lee, M Beer, Andrew S. McCallion, Benjamin J. Strober, Maggie Baker, Adrian R. Krainer and Jia Shou and has published in prestigious journals such as Nature, Cell and Proceedings of the National Academy of Sciences.

In The Last Decade

David U. Gorkin

20 papers receiving 2.8k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function

2015 648 citations Ya Guo, Quan Xu et al. Cell profile →
Chromatin Domains: The Unit of Chromosome Organization

2016 504 citations Jesse R. Dixon, David U. Gorkin et al. Molecular Cell profile →
Interpreting type 1 diabetes risk with genetics and single-cell epigenomics

2021 205 citations Joshua Chiou, Ryan J. Geusz et al. Nature profile →
Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation

2021 184 citations Naoki Kubo, Haruhiko Ishii et al. Nature Structural & Molecular Biology profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
David U. Gorkin United States	16	2.4k	690	452	262	160	20	2.8k
Robin Andersson Denmark	30	2.4k 1.0×	470 0.7×	311 0.7×	473 1.8×	131 0.8×	59	2.9k
Yunjiang Qiu United States	15	1.5k 0.6×	418 0.6×	224 0.5×	170 0.6×	158 1.0×	18	1.8k
Reini F. Luco France	15	1.9k 0.8×	329 0.5×	166 0.4×	425 1.6×	318 2.0×	22	2.3k
Yun-Shen Chan Singapore	16	3.0k 1.3×	371 0.5×	536 1.2×	288 1.1×	263 1.6×	25	3.3k
Robbyn Issner United States	12	2.8k 1.2×	564 0.8×	201 0.4×	377 1.4×	65 0.4×	16	3.2k
Petra Schwalie Switzerland	17	2.1k 0.9×	471 0.7×	512 1.1×	371 1.4×	146 0.9×	30	2.9k
Mark E. Massari United States	12	1.8k 0.8×	423 0.6×	390 0.9×	153 0.6×	149 0.9×	21	2.5k
Tomasz Gambin Poland	22	765 0.3×	649 0.9×	252 0.6×	111 0.4×	137 0.9×	75	1.4k
Leah O. Barrera United States	7	3.1k 1.3×	539 0.8×	287 0.6×	381 1.5×	62 0.4×	7	3.5k
Andrew H. Reiner Norway	18	1.7k 0.7×	1.8k 2.6×	713 1.6×	350 1.3×	83 0.5×	28	2.9k

Countries citing papers authored by David U. Gorkin

Since Specialization

Citations

This map shows the geographic impact of David U. Gorkin's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by David U. Gorkin with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites David U. Gorkin more than expected).

Fields of papers citing papers by David U. Gorkin

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by David U. Gorkin. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by David U. Gorkin. The network helps show where David U. Gorkin may publish in the future.

Co-authorship network of co-authors of David U. Gorkin

This figure shows the co-authorship network connecting the top 25 collaborators of David U. Gorkin. A scholar is included among the top collaborators of David U. Gorkin based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with David U. Gorkin. David U. Gorkin is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Fletez‐Brant, Kipper, Yunjiang Qiu, David U. Gorkin, Ming Hu, & Kasper D. Hansen. (2024). Removing unwanted variation between samples in Hi-C experiments. Briefings in Bioinformatics. 25(3). 3 indexed citations

Benaglio, Paola, Jee Yun Han, Joshua Chiou, et al.. (2023). Mapping genetic effects on cell type-specific chromatin accessibility and annotating complex immune trait variants using single nucleus ATAC-seq in peripheral blood. PLoS Genetics. 19(6). e1010759–e1010759. 15 indexed citations

Sengupta, Srikumar, Scott Swanson, Brian E. McIntosh, et al.. (2022). Rapid changes in chromatin structure during dedifferentiation of primary hepatocytes in vitro. Genomics. 114(3). 110330–110330. 8 indexed citations

Kubo, Naoki, Haruhiko Ishii, Xiong Xiong, et al.. (2021). Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation. Nature Structural & Molecular Biology. 28(2). 152–161. 184 indexed citations breakdown →

Chiou, Joshua, Chun Zeng, Cheng Zhang, et al.. (2021). Single-cell chromatin accessibility identifies pancreatic islet cell type– and state-specific regulatory programs of diabetes risk. Nature Genetics. 53(4). 455–466. 89 indexed citations

Chiou, Joshua, Ryan J. Geusz, Mei-Lin Okino, et al.. (2021). Interpreting type 1 diabetes risk with genetics and single-cell epigenomics. Nature. 594(7863). 398–402. 205 indexed citations breakdown →

Chiou, Joshua, Ryan J. Geusz, Mei-Lin Okino, et al.. (2021). Interpreting type 1 diabetes risk with genetics and single-cell epigenomics. Yearbook of pediatric endocrinology. 2 indexed citations

He, Yupeng, Manoj Hariharan, David U. Gorkin, et al.. (2020). Spatiotemporal DNA methylome dynamics of the developing mouse fetus. Nature. 583(7818). 752–759. 78 indexed citations

Gorkin, David U., Yunjiang Qiu, Ming Hu, et al.. (2019). Common DNA sequence variation influences 3-dimensional conformation of the human genome. Genome biology. 20(1). 255–255. 47 indexed citations

10.

Preißl, Sebastian, Rongxin Fang, Hui Huang, et al.. (2018). Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation. Nature Neuroscience. 21(3). 432–439. 195 indexed citations

11.

He, Yupeng, David U. Gorkin, Diane E. Dickel, et al.. (2017). Improved regulatory element prediction based on tissue-specific local epigenomic signatures. Proceedings of the National Academy of Sciences. 114(9). E1633–E1640. 45 indexed citations

12.

Dixon, Jesse R., David U. Gorkin, & Bing Ren. (2016). Chromatin Domains: The Unit of Chromosome Organization. Molecular Cell. 62(5). 668–680. 504 indexed citations breakdown →

13.

Guo, Ya, Quan Xu, Daniele Canzio, et al.. (2015). CRISPR Inversion of CTCF Sites Alters Genome Topology and Enhancer/Promoter Function. Cell. 162(4). 900–910. 648 indexed citations breakdown →

14.

Fufa, Temesgen, Melissa L. Harris, Dawn E. Watkins‐Chow, et al.. (2015). Genomic analysis reveals distinct mechanisms and functional classes of SOX10-regulated genes in melanocytes. Human Molecular Genetics. 24(19). 5433–5450. 33 indexed citations

15.

Lee, Dongwon, David U. Gorkin, Maggie Baker, et al.. (2015). A method to predict the impact of regulatory variants from DNA sequence. Nature Genetics. 47(8). 955–961. 294 indexed citations

16.

Gorkin, David U., Danny Leung, & Bing Ren. (2014). The 3D Genome in Transcriptional Regulation and Pluripotency. Cell stem cell. 14(6). 762–775. 272 indexed citations

17.

Gorkin, David U., Dongwon Lee, Xylena Reed, et al.. (2012). Integration of ChIP-seq and machine learning reveals enhancers and a predictive regulatory sequence vocabulary in melanocytes. Genome Research. 22(11). 2290–2301. 54 indexed citations

18.

Prasad, Megana, Xylena Reed, David U. Gorkin, et al.. (2011). SOX10 directly modulates ERBB3 transcription via an intronic neural crest enhancer. BMC Developmental Biology. 11(1). 40–40. 48 indexed citations

19.

Lauring, Josh, David Cosgrove, Stefani C. Fontana, et al.. (2010). Knock in of the AKT1 E17K mutation in human breast epithelial cells does not recapitulate oncogenic PIK3CA mutations. Oncogene. 29(16). 2337–2345. 44 indexed citations

20.

Stine, Zachary E., Jimmy Huynh, Stacie K. Loftus, et al.. (2009). Oligodendroglial and pan‐neural crest expression of Cre recombinase directed by Sox10 enhancer. genesis. 47(11). 765–770. 24 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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