Petra Schwalie

5.6k total citations · 3 hit papers
30 papers, 2.9k citations indexed

About

Petra Schwalie is a scholar working on Molecular Biology, Epidemiology and Physiology. According to data from OpenAlex, Petra Schwalie has authored 30 papers receiving a total of 2.9k indexed citations (citations by other indexed papers that have themselves been cited), including 19 papers in Molecular Biology, 7 papers in Epidemiology and 7 papers in Physiology. Recurrent topics in Petra Schwalie's work include Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (8 papers) and Adipose Tissue and Metabolism (7 papers). Petra Schwalie is often cited by papers focused on Genomics and Chromatin Dynamics (10 papers), RNA Research and Splicing (8 papers) and Adipose Tissue and Metabolism (7 papers). Petra Schwalie collaborates with scholars based in Switzerland, United Kingdom and Germany. Petra Schwalie's co-authors include Dominic Schmidt, Paul Flicek, Duncan T. Odom, Gordon D. Brown, Michael D. Wilson, Claudia Kutter, Benoît Ballester, Aileen Marshall, Bart Deplancke and Stephen Watt and has published in prestigious journals such as Nature, Science and Cell.

In The Last Decade

Petra Schwalie

30 papers receiving 2.8k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding

2010 535 citations Dominic Schmidt, Michael D. Wilson et al. Science profile →
Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages

2012 422 citations Dominic Schmidt, Petra Schwalie et al. profile →
A stromal cell population that inhibits adipogenesis in mammalian fat depots

2018 330 citations Petra Schwalie, Hua Dong et al. Nature profile →

Peers

Countries citing papers authored by Petra Schwalie

Since Specialization

Citations

This map shows the geographic impact of Petra Schwalie's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Petra Schwalie with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Petra Schwalie more than expected).

Fields of papers citing papers by Petra Schwalie

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Petra Schwalie. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Petra Schwalie. The network helps show where Petra Schwalie may publish in the future.

Co-authorship network of co-authors of Petra Schwalie

This figure shows the co-authorship network connecting the top 25 collaborators of Petra Schwalie. A scholar is included among the top collaborators of Petra Schwalie based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Petra Schwalie. Petra Schwalie is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	PD-1–targeted cis-delivery of an IL-2 variant induces a multifaceted antitumoral T cell response in human lung cancer 2025 ·Science Translational Medicine ·(unknown), (unknown), Petra Herzig, Markus Germann, (unknown), (unknown), Petra Schwalie, (unknown), Viola Katharina Vetter, Viktor H. Koelzer, Didier Lardinois, Henry Kao, Laura Codarri Deak, Pablo Umaña, Christian Klein, (unknown), Marina Natoli, Alfred Zippelius	1
2	Innate immune response to AAV-based gene therapy vectors: Mechanisms of complement activation and cytokine release 2025 ·Molecular Therapy — Methods & Clinical Development ·(unknown), Petra Schwalie, Emma Bell, Désirée von Tell, Guido Steiner, (unknown), Julian J. Freen‐van Heeren, Annelies W. Turksma, Richard B. Pouw, Timo Schwandt, Michael B. Otteneder, Theo Rispens, Mieke C. Brouwer, (unknown), Hélène Haegel	1
3	Myeloid-T cell interplay and cell state transitions associated with checkpoint inhibitor response in melanoma 2024 ·Med ·Ramona Schlenker, Petra Schwalie, Steffen Dettling, (unknown), Anja Irmisch, Marisa Mariani, Julia M. Martínez Gómez, Alison Ribeiro, (unknown), Sylvia Herter, Emilio Yángüez, Sabine Hoves, (unknown), Juliane Siebourg‐Polster, Tony Kam‐Thong, Ines Matos, Pablo Umaña, Reinhard Dummer, Mitchell P. Levesque, Marina Bacac	5
4	Tumor-agnostic transcriptome-based classifier identifies spatial infiltration patterns of CD8+T cells in the tumor microenvironment and predicts clinical outcome in early-phase and late-phase clinical trials 2024 ·Journal for ImmunoTherapy of Cancer ·Andreas Roller, Iakov I. Davydov, Petra Schwalie, Martha L. Serrano‐Serrano, (unknown), (unknown), Cláudia S. Ferreira, (unknown), Irina Klaman, Alberto Valdeolivas, Konstanty Korski, Michael A. Cannarile	6
5	Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research 2021 ·NAR Genomics and Bioinformatics ·Sophia C. Mädler, (unknown), (unknown), (unknown), (unknown), Albert S. W. Kang, (unknown), Roland Schmucki, Jitao David Zhang, Martin Ebeling, Laura Badi, Tony Kam‐Thong, Petra Schwalie, Klas Hatje	12
6	LncRNA Ctcflos orchestrates transcription and alternative splicing in thermogenic adipogenesis 2021 ·EMBO Reports ·(unknown), (unknown), Peter Weber, Tobias Fromme, (unknown), Petra Schwalie, Bart Deplancke, Yongguo Li, Martin Klingenspor	15
7	ZFP30 promotes adipogenesis through the KAP1-mediated activation of a retrotransposon-derived Pparg2 enhancer 2019 ·Nature Communications ·Wanze Chen, Petra Schwalie, (unknown), Carine Gubelmann, Sunil K. Raghav, Riccardo Dainese, Marco Cassano, Michaël Imbeault, Suk Min Jang, Julie Russeil, Tenagne D. Challa, Julien Duc, Didier Trono, Christian Wolfrum, Bart Deplancke	26
8	Mechanism and effects of pulsatile GABA secretion from cytosolic pools in the human beta cell 2019 ·Nature Metabolism ·Danusa Menegaz, (unknown), Joana Almaça, Chiara Cianciaruso, Rayner Rodriguez‐Diaz, Judith Molina, (unknown), (unknown), Petra Schwalie, Rita Nano, Fanny Lebreton, Kang Chen, Rajan Sah, Herbert Y. Gaisano, Per‐Olof Berggren, Steinunn Bækkeskov, Alejandro Caicedo, Edward A. Phelps	79
9	Systems-Genetics-Based Inference of a Core Regulatory Network Underlying White Fat Browning 2019 ·Cell Reports ·Yongguo Li, Petra Schwalie, (unknown), (unknown), Julie Russeil, Tobias Fromme, Bart Deplancke, Martin Klingenspor	12
10	A stromal cell population that inhibits adipogenesis in mammalian fat depots breakdown → 2018 ·Nature ·Petra Schwalie, Hua Dong, Magda Zachara, Julie Russeil, Daniel Alpern, (unknown), Christian Caprara, Wenfei Sun, (unknown), Gianni Soldati, Christian Wolfrum, Bart Deplancke	330
11	ASAP: a web-based platform for the analysis and interactive visualization of single-cell RNA-seq data 2017 ·Bioinformatics ·Vincent Gardeux, (unknown), (unknown), Petra Schwalie, Bart Deplancke	87
12	Cross-Tissue Identification of Somatic Stem and Progenitor Cells Using a Single-Cell RNA-Sequencing Derived Gene Signature 2017 ·Stem Cells ·Petra Schwalie, Paloma Ordóñez‐Morán, Joerg Huelsken, Bart Deplancke	5
13	Dissecting the brown adipogenic regulatory network using integrative genomics 2017 ·Scientific Reports ·Rachana Pradhan, (unknown), Vincent Gardeux, Petra Schwalie, Daniel Alpern, Wanze Chen, Julie Russeil, Sunil K. Raghav, Bart Deplancke	17
14	Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders 2016 ·Genome biology ·Liis Uusküla-Reimand, Huayun Hou, Payman Samavarchi‐Tehrani, Matteo Vietri Rudan, Minggao Liang, Alejandra Medina-Rivera, Hisham Mohammed, Dominic Schmidt, Petra Schwalie, Edwin J. Young, Jüri Reimand, Suzana Hadjur, Anne‐Claude Gingras, Michael D. Wilson	167
15	GLUT3 is induced during epithelial-mesenchymal transition and promotes tumor cell proliferation in non-small cell lung cancer 2014 ·DSpace@MIT (Massachusetts Institute of Technology) ·Mark Masin, Jessica Vázquez, Simona Rossi, Svenja Groeneveld, (unknown), Petra Schwalie, Bart Deplancke, Darius Moradpour, Trudy G. Oliver, Etienne Meylan, (unknown), Jérôme Gouttenoire	1
16	GLUT3 is induced during epithelial-mesenchymal transition and promotes tumor cell proliferation in non-small cell lung cancer 2014 ·Cancer & Metabolism ·Mark Masin, Jessica Vázquez, Simona Rossi, Svenja Groeneveld, (unknown), Petra Schwalie, Bart Deplancke, (unknown), Jérôme Gouttenoire, Darius Moradpour, Trudy G. Oliver, Etienne Meylan	124
17	Insights into Negative Regulation by the Glucocorticoid Receptor from Genome-wide Profiling of Inflammatory Cistromes 2012 ·Molecular Cell ·N. Henriette Uhlenhaut, Grant D. Barish, Ruth T. Yu, Michael Downes, Malith Karunasiri, Christopher Liddle, Petra Schwalie, Norbert Hübner, Ronald M. Evans	202
18	Latent Regulatory Potential of Human-Specific Repetitive Elements 2012 ·Molecular Cell ·Michelle C. Ward, Michael D. Wilson, Nuno L. Barbosa‐Morais, Dominic Schmidt, Rory Stark, Qun Pan, Petra Schwalie, Suraj Menon, Margus Lukk, Stephen Watt, David Thybert, Claudia Kutter, Kristina Kirschner, Paul Flicek, Benjamin J. Blencowe, Duncan T. Odom	47
19	Five-Vertebrate ChIP-seq Reveals the Evolutionary Dynamics of Transcription Factor Binding breakdown → 2010 ·Science ·Dominic Schmidt, Michael D. Wilson, Benoît Ballester, Petra Schwalie, Gordon D. Brown, Aileen Marshall, Claudia Kutter, Stephen Watt, Celia Pilar Martinez‐Jimenez, Sarah Mackay, Iannis Talianidis, Paul Flicek, Duncan T. Odom	535
20	A CTCF-independent role for cohesin in tissue-specific transcription 2010 ·Genome Research ·Dominic Schmidt, Petra Schwalie, Caryn S. Ross-Innes, Antoni Hurtado, Gordon D. Brown, Jason S. Carroll, Paul Flicek, Duncan T. Odom	291

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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