Burak Kaynak

725 total citations
18 papers, 415 citations indexed

About

Burak Kaynak is a scholar working on Molecular Biology, Materials Chemistry and Nuclear and High Energy Physics. According to data from OpenAlex, Burak Kaynak has authored 18 papers receiving a total of 415 indexed citations (citations by other indexed papers that have themselves been cited), including 11 papers in Molecular Biology, 8 papers in Materials Chemistry and 3 papers in Nuclear and High Energy Physics. Recurrent topics in Burak Kaynak's work include Protein Structure and Dynamics (10 papers), Enzyme Structure and Function (8 papers) and Black Holes and Theoretical Physics (3 papers). Burak Kaynak is often cited by papers focused on Protein Structure and Dynamics (10 papers), Enzyme Structure and Function (8 papers) and Black Holes and Theoretical Physics (3 papers). Burak Kaynak collaborates with scholars based in United States, Türkiye and China. Burak Kaynak's co-authors include Pemra Doruker, İvet Bahar, James Krieger, She Zhang, Hongchun Li, Karolina Mikulska‐Ruminska, Yan Zhang, Cihan Kaya, Yan Zhang and Anupam Banerjee and has published in prestigious journals such as Bioinformatics, The Journal of Physical Chemistry B and Nature Chemical Biology.

In The Last Decade

Burak Kaynak

18 papers receiving 413 citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Burak Kaynak United States	11	319	83	76	49	29	18	415
Zeynep Kurkcuoglu Türkiye	11	337 1.1×	72 0.9×	111 1.5×	24 0.5×	30 1.0×	15	414
João V. Ribeiro United States	5	253 0.8×	39 0.5×	70 0.9×	27 0.6×	19 0.7×	5	406
Nils Woetzel United States	12	556 1.7×	89 1.1×	147 1.9×	42 0.9×	74 2.6×	16	754
João M. Martins Portugal	10	286 0.9×	62 0.7×	67 0.9×	18 0.4×	26 0.9×	16	347
Camilo Velez‐Vega United States	12	334 1.0×	108 1.3×	70 0.9×	32 0.7×	38 1.3×	19	435
She Zhang United States	13	465 1.5×	68 0.8×	92 1.2×	176 3.6×	55 1.9×	21	769
José Ignacio Garzón United States	10	633 2.0×	148 1.8×	123 1.6×	50 1.0×	42 1.4×	12	748
Siv Midtun Hollup Norway	6	336 1.1×	46 0.6×	131 1.7×	16 0.3×	36 1.2×	7	386
Lane Votapka United States	13	614 1.9×	179 2.2×	84 1.1×	40 0.8×	45 1.6×	25	784
Diego del Alamo United States	9	346 1.1×	53 0.6×	125 1.6×	10 0.2×	50 1.7×	13	429

Countries citing papers authored by Burak Kaynak

Since Specialization

Citations

This map shows the geographic impact of Burak Kaynak's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Burak Kaynak with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Burak Kaynak more than expected).

Fields of papers citing papers by Burak Kaynak

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Burak Kaynak. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Burak Kaynak. The network helps show where Burak Kaynak may publish in the future.

Co-authorship network of co-authors of Burak Kaynak

This figure shows the co-authorship network connecting the top 25 collaborators of Burak Kaynak. A scholar is included among the top collaborators of Burak Kaynak based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Burak Kaynak. Burak Kaynak is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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18 of 18 papers shown

Kumar, Ambuj, Burak Kaynak, Karin S. Dorman, Pemra Doruker, & Robert L. Jernigan. (2023). Predicting allosteric pockets in protein biological assemblages. Bioinformatics. 39(5). 15 indexed citations

Kaynak, Burak, Pemra Doruker, Anupam Banerjee, et al.. (2023). Cooperative mechanics of PR65 scaffold underlies the allosteric regulation of the phosphatase PP2A. Structure. 31(5). 607–618.e3. 8 indexed citations

Kaynak, Burak, James Krieger, Maurício G. S. Costa, et al.. (2022). Sampling of Protein Conformational Space Using Hybrid Simulations: A Critical Assessment of Recent Methods. Frontiers in Molecular Biosciences. 9. 832847–832847. 21 indexed citations

Cheng, Mary Hongying, James Krieger, Anupam Banerjee, et al.. (2022). Impact of new variants on SARS-CoV-2 infectivity and neutralization: A molecular assessment of the alterations in the spike-host protein interactions. iScience. 25(3). 103939–103939. 34 indexed citations

Kaynak, Burak, She Zhang, İvet Bahar, & Pemra Doruker. (2021). ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution. Bioinformatics. 37(21). 3956–3958. 16 indexed citations

Sutkevičiu̅tė, Ieva, Ji Young Lee, Alex D. White, et al.. (2021). Precise druggability of the PTH type 1 receptor. Nature Chemical Biology. 18(3). 272–280. 21 indexed citations

Cheng, Mary Hongying, James Krieger, Yufei Xiang, et al.. (2021). Impact of New Variants on SAR-CoV-2 Infectivity and Neutralization: A Molecular Assessment of the Alterations in the Spike-Host Protein Interactions. SSRN Electronic Journal. 2 indexed citations

Zhang, She, James Krieger, Yan Zhang, et al.. (2021). ProDy 2.0: increased scale and scope after 10 years of protein dynamics modelling with Python. Bioinformatics. 37(20). 3657–3659. 118 indexed citations

Kaynak, Burak, İvet Bahar, & Pemra Doruker. (2020). Essential site scanning analysis: A new approach for detecting sites that modulate the dispersion of protein global motions. Computational and Structural Biotechnology Journal. 18. 1577–1586. 45 indexed citations

10.

Zhang, Yan, James Krieger, Karolina Mikulska‐Ruminska, et al.. (2020). State-dependent sequential allostery exhibited by chaperonin TRiC/CCT revealed by network analysis of Cryo-EM maps. Progress in Biophysics and Molecular Biology. 160. 104–120. 12 indexed citations

11.

Zhang, Yan, Pemra Doruker, Burak Kaynak, et al.. (2019). Intrinsic dynamics is evolutionarily optimized to enable allosteric behavior. Current Opinion in Structural Biology. 62. 14–21. 79 indexed citations

12.

Kaynak, Burak & Pemra Doruker. (2019). Protein–Ligand Complexes as Constrained Dynamical Systems. Journal of Chemical Information and Modeling. 59(5). 2352–2358. 9 indexed citations

13.

Kaynak, Burak, et al.. (2017). RESPEC Incorporates Residue Specificity and the Ligand Effect into the Elastic Network Model. The Journal of Physical Chemistry B. 122(21). 5347–5355. 14 indexed citations

14.

Kaynak, Burak, et al.. (2012). Singular interactions supported by embedded curves. Journal of Physics A Mathematical and Theoretical. 45(26). 265202–265202. 4 indexed citations

15.

Kaynak, Burak, et al.. (2009). The relativistic Lee model on Riemannian manifolds. Journal of Physics A Mathematical and Theoretical. 42(22). 225402–225402. 2 indexed citations

16.

Deliduman, Cemsinan & Burak Kaynak. (2005). String theory in the Penrose limit ofAdS2×S2spacetime. Physical review. D. Particles, fields, gravitation, and cosmology. 71(10). 2 indexed citations

17.

Kaynak, Burak, et al.. (2004). MULTI-BLACK HOLES SOLUTION WITH COSMIC STRINGS. International Journal of Modern Physics A. 19(10). 1549–1557. 11 indexed citations

18.

Arık, M. & Burak Kaynak. (2003). Noncommutative phase and unitarization of GLp,q(2). Journal of Mathematical Physics. 44(4). 1730–1734. 2 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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