Tommy Kaplan

9.2k citations

56 papers · 4.3k indexed · 1 hit paper · h-index 29

Impact in

Molecular Biology top 2%
- Genomics and Chromatin Dynamics
- RNA Research and Splicing
- RNA and protein synthesis mechanisms
- Epigenetics and DNA Methylation
- RNA modifications and cancer
Neurology top 2%
- Neuroinflammation and Neurodegeneration Mechanisms

Papers in

Molecular Biology 49
- Genomics and Chromatin Dynamics 28
- Epigenetics and DNA Methylation 10
- RNA and protein synthesis mechanisms 9
- Genomics and Phylogenetic Studies 8
- RNA Research and Splicing 8
- RNA modifications and cancer 5
- Machine Learning in Bioinformatics 4
Genetics 14

Co-authors: Nir Friedman Oliver J. Rando Stephen Buratowski Michael B. Eisen Melissa M. Harrison Xiaoyong Li Aviv Regev Naomi Habib
Journals: PLoS Genetics (5 papers)Nature Communications (4 papers)Nucleic Acids Research (3 papers)Proceedings of the National Academy of Sciences (3 papers)eLife (3 papers)
Partner nations: Israel United States Germany

In The Last Decade

Tommy Kaplan

56 papers receiving 4.3k citations

Hit Papers

align trajectories log scale

Disease-associated astrocytes in Alzheimer’s disease and aging 2020 · 587 citations

Peers

Countries citing papers authored by Tommy Kaplan

Since Specialization

Citations

This map shows the geographic impact of Tommy Kaplan's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tommy Kaplan with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tommy Kaplan more than expected).

Fields of papers citing papers by Tommy Kaplan

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tommy Kaplan. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tommy Kaplan. The network helps show where Tommy Kaplan may publish in the future.

Co-authors

The 25 scholars most cited alongside Tommy Kaplan, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Tommy Kaplan Line = papers co-authored together Tommy Kaplan links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Determining time since deposition of latent fingerprints on forensic adhesive tape using ultrafast DESI-MS and machine learning Scientific Reports ·Chizu Okamatu, Gayathry Rajeevan, N. A. Maslennikova, Rodrigo Arancibia, Amani Zoabi, G. Golan, 張校湜, Yi-Ping Chiu, Senlin Liu, Tommy Kaplan, J Mertin	2025	1
2	DNA Methylation–Based Assessment of Cell Composition in Human Pancreas and Islets Diabetes ·Zeina Drawshy, Daniel Neiman, Michael Shearn, Ayelet Peretz, Judith Magenheim, Marian T. Dorner, Nicolai M. Doliba, Doris A. Stoffers, Klaus H. Kaestner, Desmond Schatz, Clive Wasserfall, Martha Campbell‐Thompson, A. M. James Shapiro, Tommy Kaplan, Ruth Shemer, Benjamin Gläser, Agnes Klochendler, Yuval Dor	2024	4
3	Toxinome—the bacterial protein toxin database mBio ·Obi Bryan Lawrence, F Mosca, Raphael Pirzer, 山口真弓, Mikheil Sokhashvili, Tommy Kaplan, Asaf Levy	2023	4
4	Circulating cell-free methylated DNA reveals tissue-specific, cellular damage from radiation treatment JCI Insight ·Bryan MacDonald Angel Mayedo, Netanel Loyfer, Deborah Chabi, Marcel O. Schmidt, Akash Talukder, Sidharth Jain, Sarah Martinez, Lucía Suanes-Cobos, Paul CAQUET, A. R. Hanauske, Z. Wagner, Heng‐Hong Li, Anne Deslattes Mays, Sonali Rudra, Anna T. Riegel, Keith Unger, Tommy Kaplan, Anton Wellstein	2023	6
5	Disease-associated astrocytes in Alzheimer’s disease and aging Nature Neuroscience ·Naomi Habib, Cristin McCabe, Larskaia Mv, Audrey Auleley, Daniel Kitsberg, Xiaojing Wang, Oleg L. Kuzmenko, Danielle Dionne, Lan Nguyễn, Jamie L. Marshall, Fei Chen, Feng Zhang, Tommy Kaplan, Aviv Regev, Michal Schwartz Hit paper breakdown →	2020	587
6	Genomic retargeting of p53 and CTCF is associated with transcriptional changes during oncogenic HRas-induced transformation Communications Biology ·Michal Schwartz, Andre L. L. Vanzela, Natalia Marcos Carrasco, 真喜子滝沢, Leslie E. Cohen, 李明玲, F. Brodeau, 陈小芬, Tommy Kaplan, Zaidoun Salah, Ofir Hakim	2020	3
7	Direct Induction of the Three Pre-implantation Blastocyst Cell Types from Fibroblasts Cell stem cell ·Ville Lehmuskoksi, Eyal Zisser, Zekeríya Kul, A. Mattern, Makbul Hussain Chowdhury, Kirill Makedonski, Agostino Ciampelli, Marie T. Russo, C Nayak, William Carreer, Nadiіa Novoselska, I. A. Nazaruk, Oren Ram, Tommy Kaplan, Yosef Buganim	2019	37
8	Unraveling the transcriptional regulation of TWIST1 in limb development PLoS Genetics ·Erika Cristiane Kato, JasonSlagle, G. Fumarola, P. Kotov, Andressa Celente de Ávila, Idit Dahan, Noam Levaot, Tommy Kaplan, Darío G. Lupiáñez, Ramon Y. Birnbaum	2018	21
9	Genome-wide search for Zelda-like chromatin signatures identifies GAF as a pioneer factor in early fly development Epigenetics & Chromatin ·博之丸田, Tommy Kaplan	2017	19
10	Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the early Drosophila embryo Genome Research ·Katharine N. Schulz, Eliana R. Bondra, 博之丸田, Jacqueline E. Villalta, Jason D. Lieb, Tommy Kaplan, Daniel J. McKay, Melissa M. Harrison	2015	122
11	Extensive Divergence of Transcription Factor Binding in Drosophila Embryos with Highly Conserved Gene Expression PLoS Genetics ·Mathilde Paris, Tommy Kaplan, Amna Rehana Siddiqui, Jacqueline E. Villalta, Susan E. Lott, Michael B. Eisen	2013	69
12	Quantitative Models of the Mechanisms that Control Genome-Wide Patterns of Animal Transcription Factor Binding Methods in cell biology ·Tommy Kaplan, Mark D. Biggin	2012	7
13	High Throughput Determination of TGFβ1/SMAD3 Targets in A549 Lung Epithelial Cells PLoS ONE ·Yingze Zhang, Daniel Handley, Tommy Kaplan, Haiying Yu, Abha Bais, Thomas J. Richards, Kusum Pandit, Gabriela Corati Touguinha, Panayiotis V. Benos, Nir Friedman, Oliver Eickelberg, Naftali Kaminski	2011	52
14	Zelda Binding in the Early Drosophila melanogaster Embryo Marks Regions Subsequently Activated at the Maternal-to-Zygotic Transition PLoS Genetics ·Melissa M. Harrison, Xiaoyong Li, Tommy Kaplan, Michael R. Botchan, Michael B. Eisen	2011	244
15	Quantitative Models of the Mechanisms That Control Genome-Wide Patterns of Transcription Factor Binding during Early Drosophila Development PLoS Genetics ·Tommy Kaplan, Jian Wen Chen, Peter J. Sabo, Sean Thomas, J Stamatoyannopoulos, Mark D. Biggin, Michael B. Eisen	2011	121
16	Large-scale discovery of enhancers from human heart tissue Nature Genetics ·Dalit May, Matthew J. Blow, Tommy Kaplan, David J. McCulley, Brian C. Jensen, Jennifer A. Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Alexandra Marie Taylor, Veena Afzal, Paul Simpson, Edward M. Rubin, Brian L. Black, James Bristow, L Pennacchio, Axel Visel	2011	202
17	Structure and function of a transcriptional network activated by the MAPK Hog1 Nature Genetics ·Andrew P. Capaldi, Tommy Kaplan, Ying Liu, Naomi Habib, Aviv Regev, Nir Friedman, Erin K. O’Shea	2008	179
18	Dynamics of Replication-Independent Histone Turnover in Budding Yeast Science ·Michael F. Dion, Tommy Kaplan, Min Kyu Kim, Stephen Buratowski, Nir Friedman, Oliver J. Rando	2007	435
19	Single-Nucleosome Mapping of Histone Modifications in S. cerevisiae PLoS Biology ·Chih Long Liu, Tommy Kaplan, Min‐Kyu Kim, Stephen Buratowski, Stuart L. Schreiber, Nir Friedman, Oliver J. Rando	2005	401
20	CIS: compound importance sampling method for protein–DNA binding site p-value estimation Bioinformatics ·Yoseph Barash, Gal Elidan, Tommy Kaplan, Nir Friedman	2004	23

About Tommy Kaplan

Tommy Kaplan is a scholar working on Molecular Biology, Genetics, Developmental Biology, Biological Psychiatry and Cancer Research, having authored 56 papers that have together received 4.3k indexed citations. Recurring topics across this work include Genomics and Chromatin Dynamics (28 papers), Epigenetics and DNA Methylation (10 papers), RNA and protein synthesis mechanisms (9 papers), Genomics and Phylogenetic Studies (8 papers), RNA Research and Splicing (8 papers), Chromosomal and Genetic Variations (6 papers), RNA modifications and cancer (5 papers) and Machine Learning in Bioinformatics (4 papers). The work is most often cited by research in Molecular Biology (3.6k citations), Neurology (379 citations), Biological Psychiatry (96 citations), Aging (46 citations) and Genetics (504 citations). Tommy Kaplan has collaborated with scholars based in Israel, United States and Germany. Frequent co-authors include Nir Friedman, Oliver J. Rando, Stephen Buratowski, Michael B. Eisen, Melissa M. Harrison, Xiaoyong Li, Aviv Regev, Naomi Habib, Min Kyu Kim and Michael F. Dion. Their work appears in journals such as PLoS Genetics, Nature Communications, Nucleic Acids Research, Proceedings of the National Academy of Sciences and eLife.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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