Tomasz Kościółek

36.9k total citations · 2 hit papers
39 papers, 2.3k citations indexed

About

Tomasz Kościółek is a scholar working on Molecular Biology, Physiology and Biological Psychiatry. According to data from OpenAlex, Tomasz Kościółek has authored 39 papers receiving a total of 2.3k indexed citations (citations by other indexed papers that have themselves been cited), including 30 papers in Molecular Biology, 9 papers in Physiology and 7 papers in Biological Psychiatry. Recurrent topics in Tomasz Kościółek's work include Gut microbiota and health (17 papers), Protein Structure and Dynamics (7 papers) and Diet and metabolism studies (7 papers). Tomasz Kościółek is often cited by papers focused on Gut microbiota and health (17 papers), Protein Structure and Dynamics (7 papers) and Diet and metabolism studies (7 papers). Tomasz Kościółek collaborates with scholars based in Poland, United States and United Kingdom. Tomasz Kościółek's co-authors include Rob Knight, David T. Jones, Tanya T. Nguyen, Dilip V. Jeste, Tanya Singh, Daniel McDonald, Ramnik J. Xavier, Vladimir Gligorijević, Richard Bonneau and Chris Chandler and has published in prestigious journals such as Nature Communications, Bioinformatics and PLoS ONE.

In The Last Decade

Tomasz Kościółek

37 papers receiving 2.2k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Structure-based protein function prediction using graph convolutional networks

2021 467 citations Vladimir Gligorijević, P. Douglas Renfrew et al. Nature Communications profile →
QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data

2020 318 citations Mehrbod Estaki, Daniel McDonald et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Tomasz Kościółek Poland	18	1.6k	368	323	232	212	39	2.3k
Young Sun Hwang South Korea	33	2.1k 1.3×	133 0.4×	126 0.4×	43 0.2×	54 0.3×	127	3.5k
Saeed Shoaie Sweden	26	2.1k 1.3×	154 0.4×	636 2.0×	28 0.1×	25 0.1×	58	3.2k
Wynand Alkema Netherlands	26	1.9k 1.2×	30 0.1×	149 0.5×	38 0.2×	108 0.5×	59	3.0k
Mitsuharu Matsumoto Japan	34	2.4k 1.5×	217 0.6×	579 1.8×	138 0.6×	93 0.4×	129	3.6k
Aleksandra A. Kolodziejczyk United Kingdom	18	4.4k 2.8×	120 0.3×	796 2.5×	52 0.2×	18 0.1×	25	6.0k
Paola Roncada Italy	33	1.0k 0.7×	44 0.1×	186 0.6×	40 0.2×	25 0.1×	118	3.0k
Jie Ren China	38	3.2k 2.0×	86 0.2×	457 1.4×	27 0.1×	59 0.3×	228	5.6k
Sunjae Lee South Korea	22	988 0.6×	62 0.2×	312 1.0×	23 0.1×	55 0.3×	70	1.9k
Boyang Ji Sweden	26	1.6k 1.0×	54 0.1×	266 0.8×	19 0.1×	81 0.4×	66	2.4k

Countries citing papers authored by Tomasz Kościółek

Since Specialization

Citations

This map shows the geographic impact of Tomasz Kościółek's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tomasz Kościółek with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tomasz Kościółek more than expected).

Fields of papers citing papers by Tomasz Kościółek

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tomasz Kościółek. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tomasz Kościółek. The network helps show where Tomasz Kościółek may publish in the future.

Co-authorship network of co-authors of Tomasz Kościółek

This figure shows the co-authorship network connecting the top 25 collaborators of Tomasz Kościółek. A scholar is included among the top collaborators of Tomasz Kościółek based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tomasz Kościółek. Tomasz Kościółek is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Kościółek, Tomasz, et al.. (2024). Microbiome time series data reveal predictable patterns of change. Microbiology Spectrum. 12(10). e0410923–e0410923.

Gromowski, Tomasz, Karolina Skonieczna‐Żydecka, Mariusz Kaczmarczyk, et al.. (2024). Gut microbiome dynamics and predictive value in hospitalized COVID-19 patients: a comparative analysis of shallow and deep shotgun sequencing. Frontiers in Microbiology. 15. 1342749–1342749. 4 indexed citations

Simpson, Anna, et al.. (2024). Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysis. Microbiome. 12(1). 190–190. 6 indexed citations

Wójcik, Dagmara, Zbigniew Śliwowski, Sławomir Kwiecień, et al.. (2024). Alkaline Phosphatase Relieves Colitis in Obese Mice Subjected to Forced Exercise via Its Anti-Inflammatory and Intestinal Microbiota-Shaping Properties. International Journal of Molecular Sciences. 25(2). 703–703. 4 indexed citations

Humińska‐Lisowska, Kinga, Jan Mieszkowski, Monika Michałowska‐Sawczyn, et al.. (2024). Microbiome features associated with performance measures in athletic and non-athletic individuals: A case-control study. PLoS ONE. 19(2). e0297858–e0297858. 9 indexed citations

Gligorijević, Vladimir, Chris Chandler, Richard Bonneau, et al.. (2023). Comprehensive Functional Annotation of Metagenomes and Microbial Genomes Using a Deep Learning-Based Method. mSystems. 8(2). e0117822–e0117822. 20 indexed citations

Mordalski, Stefan & Tomasz Kościółek. (2023). Homology Modeling of the G Protein-Coupled Receptors. Methods in molecular biology. 2627. 167–181. 2 indexed citations

Szaleniec, Joanna, et al.. (2023). Determinants of the microbiome spatial variability in chronic rhinosinusitis. Rhinology Journal. 0(0). 0–0. 2 indexed citations

Kaczmarczyk, Mariusz, Monika Szulińska, Igor Łoniewski, et al.. (2022). Treatment With Multi-Species Probiotics Changes the Functions, Not the Composition of Gut Microbiota in Postmenopausal Women With Obesity: A Randomized, Double-Blind, Placebo-Controlled Study. Frontiers in Cellular and Infection Microbiology. 12. 815798–815798. 26 indexed citations

10.

Gligorijević, Vladimir, P. Douglas Renfrew, Tomasz Kościółek, et al.. (2021). Structure-based protein function prediction using graph convolutional networks. Nature Communications. 12(1). 3168–3168. 467 indexed citations breakdown →

11.

Kościółek, Tomasz, Teresa A. Victor, Rayus Kuplicki, et al.. (2021). Individuals with substance use disorders have a distinct oral microbiome pattern. Brain Behavior & Immunity - Health. 15. 100271–100271. 10 indexed citations

12.

Nguyen, Tanya T., Tomasz Kościółek, Rebecca Daly, et al.. (2020). Gut microbiome in Schizophrenia: Altered functional pathways related to immune modulation and atherosclerotic risk. Brain Behavior and Immunity. 91. 245–256. 57 indexed citations

13.

Kohn, Jordan N., Tomasz Kościółek, Clarisse Marotz, et al.. (2020). Differing salivary microbiome diversity, community and diurnal rhythmicity in association with affective state and peripheral inflammation in adults. Brain Behavior and Immunity. 87. 591–602. 15 indexed citations

14.

Bouslimani, Amina, Ricardo Silva, Tomasz Kościółek, et al.. (2019). The impact of skin care products on skin chemistry and microbiome dynamics. BMC Biology. 17(1). 121 indexed citations

15.

Callewaert, Chris, Teruaki Nakatsuji, Rob Knight, et al.. (2019). IL-4Rα Blockade by Dupilumab Decreases Staphylococcus aureus Colonization and Increases Microbial Diversity in Atopic Dermatitis. Journal of Investigative Dermatology. 140(1). 191–202.e7. 158 indexed citations

16.

Callewaert, Chris, Rob Knight, Teruaki Nakatsuji, et al.. (2018). LB1505 Dupilumab-mediated IL-4Rα blockade decreases Staphylococcus aureus colonization and increases microbial diversity in patients with Atopic Dermatitis (AD). Journal of Investigative Dermatology. 138(9). B7–B7. 1 indexed citations

17.

Pandey, Vineet, Amnon Amir, Justine W. Debelius, et al.. (2017). Gut Instinct. 6825–6836. 19 indexed citations

18.

Jones, David T., et al.. (2014). MetaPSICOV: combining coevolution methods for accurate prediction of contacts and long range hydrogen bonding in proteins. Bioinformatics. 31(7). 999–1006. 238 indexed citations

19.

Kościółek, Tomasz & David T. Jones. (2014). De Novo Structure Prediction of Globular Proteins Aided by Sequence Variation-Derived Contacts. PLoS ONE. 9(3). e92197–e92197. 83 indexed citations

20.

Mordalski, Stefan, Tomasz Kościółek, Kurt Kristiansen, Ingebrigt Sylte, & Andrzej J. Bojarski. (2011). Protein binding site analysis by means of structural interaction fingerprint patterns. Bioorganic & Medicinal Chemistry Letters. 21(22). 6816–6819. 34 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact