Saeed Shoaie

5.5k total citations · 2 hit papers
58 papers, 3.2k citations indexed

About

Saeed Shoaie is a scholar working on Molecular Biology, Physiology and Epidemiology. According to data from OpenAlex, Saeed Shoaie has authored 58 papers receiving a total of 3.2k indexed citations (citations by other indexed papers that have themselves been cited), including 45 papers in Molecular Biology, 22 papers in Physiology and 10 papers in Epidemiology. Recurrent topics in Saeed Shoaie's work include Gut microbiota and health (23 papers), Diet and metabolism studies (17 papers) and Microbial Metabolic Engineering and Bioproduction (12 papers). Saeed Shoaie is often cited by papers focused on Gut microbiota and health (23 papers), Diet and metabolism studies (17 papers) and Microbial Metabolic Engineering and Bioproduction (12 papers). Saeed Shoaie collaborates with scholars based in Sweden, United Kingdom and Türkiye. Saeed Shoaie's co-authors include Jens Nielsen, Adil Mardinoğlu, Intawat Nookaew, Sunjae Lee, Rasmus Ågren, Gholamreza Bidkhori, Cheng Zhang, Mathias Uhlén, Fredrik Bäckhed and Li Liu and has published in prestigious journals such as Nature Communications, Journal of Clinical Oncology and Blood.

In The Last Decade

Saeed Shoaie

57 papers receiving 3.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals

2020 327 citations Stefania Vaga, Sunjae Lee et al. Scientific Reports profile →
The Intestine Harbors Functionally Distinct Homeostatic Tissue-Resident and Inflammatory Th17 Cells

2019 237 citations Sara Omenetti, Claudio Bussi et al. Immunity profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Saeed Shoaie Sweden	26	2.1k	636	378	339	289	58	3.2k
Yoon‐Keun Kim South Korea	27	3.0k 1.4×	351 0.6×	425 1.1×	291 0.9×	614 2.1×	49	4.2k
Ge Yang China	31	1.8k 0.9×	426 0.7×	174 0.5×	170 0.5×	318 1.1×	119	3.7k
Jun Zou China	33	1.5k 0.7×	584 0.9×	304 0.8×	188 0.6×	387 1.3×	133	3.4k
Melinda A. Engevik United States	31	1.9k 0.9×	433 0.7×	561 1.5×	145 0.4×	277 1.0×	105	3.1k
Ke Zhang China	39	3.0k 1.4×	429 0.7×	483 1.3×	131 0.4×	490 1.7×	255	6.0k
Shenghui Li China	25	1.7k 0.8×	392 0.6×	213 0.6×	109 0.3×	233 0.8×	99	2.6k
Yue Shen China	30	2.0k 0.9×	246 0.4×	463 1.2×	298 0.9×	474 1.6×	110	4.1k
Chuanxing Xiao China	17	1.9k 0.9×	617 1.0×	435 1.2×	67 0.2×	316 1.1×	43	2.8k
Nathaniel Hubert United States	12	3.1k 1.4×	1.0k 1.6×	652 1.7×	165 0.5×	331 1.1×	16	4.9k

Countries citing papers authored by Saeed Shoaie

Since Specialization

Citations

This map shows the geographic impact of Saeed Shoaie's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Saeed Shoaie with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Saeed Shoaie more than expected).

Fields of papers citing papers by Saeed Shoaie

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Saeed Shoaie. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Saeed Shoaie. The network helps show where Saeed Shoaie may publish in the future.

Co-authorship network of co-authors of Saeed Shoaie

This figure shows the co-authorship network connecting the top 25 collaborators of Saeed Shoaie. A scholar is included among the top collaborators of Saeed Shoaie based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Saeed Shoaie. Saeed Shoaie is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Kim, Woonghee, Cheng Zhang, Mathias Uhlén, et al.. (2024). Unveiling the Molecular Mechanisms of Glioblastoma through an Integrated Network-Based Approach. Biomedicines. 12(10). 2237–2237. 4 indexed citations

Özcan, Mehmet, Xiangyü Li, Hasan Türkez, et al.. (2024). Discovery of a Therapeutic Agent for Glioblastoma Using a Systems Biology-Based Drug Repositioning Approach. International Journal of Molecular Sciences. 25(14). 7868–7868. 1 indexed citations

Meng, Lingqi, Han Jin, Burak Yuluğ, et al.. (2024). Multi-omics analysis reveals the key factors involved in the severity of the Alzheimer’s disease. Alzheimer s Research & Therapy. 16(1). 213–213. 16 indexed citations

Nunes, Patrícia M., Gholamreza Bidkhori, Nourdine Bah, et al.. (2023). Systematic diet composition swap in a mouse genome-scale metabolic model reveals determinants of obesogenic diet metabolism in liver cancer. iScience. 26(2). 106040–106040. 5 indexed citations

Lee, Sunjae, et al.. (2022). Host-mycobiome metabolic interactions in health and disease. Gut Microbes. 14(1). 2121576–2121576. 26 indexed citations

Pellón, Aize, et al.. (2022). Role of Cellular Metabolism during Candida-Host Interactions. Pathogens. 11(2). 184–184. 22 indexed citations

Bidkhori, Gholamreza, Sunjae Lee, Abdellah Tebani, et al.. (2022). Genome-scale metabolic modelling of the human gut microbiome reveals changes in the glyoxylate and dicarboxylate metabolism in metabolic disorders. iScience. 25(7). 104513–104513. 38 indexed citations

Lee, Sunjae, Aize Pellón, Jens Nielsen, et al.. (2022). Integrative functional analysis uncovers metabolic differences between Candida species. Communications Biology. 5(1). 1013–1013. 9 indexed citations

Shoaie, Saeed, et al.. (2022). Irritable bowel syndrome and microbiome; Switching from conventional diagnosis and therapies to personalized interventions. Journal of Translational Medicine. 20(1). 173–173. 26 indexed citations

10.

Witherden, Elizabeth A., Sunjae Lee, Saeed Shoaie, et al.. (2020). Abundance and diversity of resistomes differ between healthy human oral cavities and gut. Nature Communications. 11(1). 693–693. 62 indexed citations

11.

Bidkhori, Gholamreza, et al.. (2020). Disease, Drugs and Dysbiosis: Understanding Microbial Signatures in Metabolic Disease and Medical Interventions. Microorganisms. 8(9). 1381–1381. 14 indexed citations

12.

Lam, Simon, Cheng Zhang, Hasan Türkez, et al.. (2020). A systems biology approach for studying neurodegenerative diseases. Drug Discovery Today. 25(7). 1146–1159. 19 indexed citations

13.

Vaga, Stefania, Sunjae Lee, Boyang Ji, et al.. (2020). Compositional and functional differences of the mucosal microbiota along the intestine of healthy individuals. Scientific Reports. 10(1). 14977–14977. 327 indexed citations breakdown →

14.

Omenetti, Sara, Claudio Bussi, Amina Metidji, et al.. (2019). The Intestine Harbors Functionally Distinct Homeostatic Tissue-Resident and Inflammatory Th17 Cells. Immunity. 51(1). 77–89.e6. 237 indexed citations breakdown →

15.

Kovatcheva‐Datchary, Petia, Saeed Shoaie, Sunjae Lee, et al.. (2019). Simplified Intestinal Microbiota to Study Microbe-Diet-Host Interactions in a Mouse Model. Cell Reports. 26(13). 3772–3783.e6. 52 indexed citations

16.

Benfeitas, Rui, Gholamreza Bidkhori, Cheng Zhang, et al.. (2018). Understanding the Representative Gut Microbiota Dysbiosis in Metformin-Treated Type 2 Diabetes Patients Using Genome-Scale Metabolic Modeling. Frontiers in Physiology. 9. 775–775. 67 indexed citations

17.

Richardson, Jonathan P., Hubertine M. E. Willems, David L. Moyes, et al.. (2017). Candidalysin Drives Epithelial Signaling, Neutrophil Recruitment, and Immunopathology at the Vaginal Mucosa. Infection and Immunity. 86(2). 137 indexed citations

18.

Elsemman, Ibrahim E., Adil Mardinoğlu, Saeed Shoaie, Taysir Hassan A. Soliman, & Jens Nielsen. (2016). Systems biology analysis of hepatitis C virus infection reveals the role of copy number increases in regions of chromosome 1q in hepatocellular carcinoma metabolism. Molecular BioSystems. 12(5). 1496–1506. 21 indexed citations

19.

Elsemman, Ibrahim E., Fredrik Karlsson, Saeed Shoaie, et al.. (2014). Genome-scale metabolic reconstructions of Bifidobacterium adolescentis L2-32 and Faecalibacterium prausnitzii A2-165 and their interaction. BMC Systems Biology. 8(1). 41–41. 83 indexed citations

20.

Hong, Kuk-Ki, Jin Hou, Saeed Shoaie, Jens Nielsen, & Sergio Bordel. (2012). Dynamic¹³C-labeling experiments prove important differences in protein turnover rate between twoSaccharomyces cerevisiaestrains. FEMS Yeast Research. 12(7). 741–747. 18 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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