Roger E. Bumgarner

20.1k total citations · 4 hit papers
126 papers, 10.3k citations indexed

About

Roger E. Bumgarner is a scholar working on Molecular Biology, Epidemiology and Immunology. According to data from OpenAlex, Roger E. Bumgarner has authored 126 papers receiving a total of 10.3k indexed citations (citations by other indexed papers that have themselves been cited), including 71 papers in Molecular Biology, 16 papers in Epidemiology and 16 papers in Immunology. Recurrent topics in Roger E. Bumgarner's work include Gene expression and cancer classification (24 papers), Bioinformatics and Genomic Networks (19 papers) and Genomics and Phylogenetic Studies (17 papers). Roger E. Bumgarner is often cited by papers focused on Gene expression and cancer classification (24 papers), Bioinformatics and Genomic Networks (19 papers) and Genomics and Phylogenetic Studies (17 papers). Roger E. Bumgarner collaborates with scholars based in United States, Thailand and Japan. Roger E. Bumgarner's co-authors include Ka Yee Yeung, Adrian E. Raftery, Geoffrey A. Blake, Leroy Hood, Gary Geiss, Trey Ideker, David R. Goodlett, Vésteinn Thórsson, Ruedi Aebersold and Jimmy K. Eng and has published in prestigious journals such as Nature, Science and Proceedings of the National Academy of Sciences.

In The Last Decade

Roger E. Bumgarner

125 papers receiving 10.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Integrated Genomic and Proteomic Analyses of a Systematically Perturbed Metabolic Network

2001 1.5k citations Roger E. Bumgarner et al. profile →
Gene expression in Pseudomonas aeruginosa biofilms

2001 870 citations Roger E. Bumgarner et al. profile →
Benzene Forms Hydrogen Bonds with Water

1992 656 citations Roger E. Bumgarner, Geoffrey A. Blake et al. profile →
Bacterial Communities in Women with Bacterial Vaginosis: High Resolution Phylogenetic Analyses Reveal Relationships of Microbiota to Clinical Criteria

2012 516 citations Roger E. Bumgarner et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Roger E. Bumgarner United States	48	5.4k	1.2k	1.1k	1.1k	987	126	10.3k
Nathan Baker United States	42	10.6k 2.0×	628 0.5×	543 0.5×	806 0.8×	1.1k 1.1×	114	15.4k
Nir Ben‐Tal Israel	57	11.8k 2.2×	461 0.4×	650 0.6×	789 0.7×	1.8k 1.9×	186	15.7k
Hans V. Westerhoff Netherlands	77	14.9k 2.8×	698 0.6×	1.2k 1.0×	462 0.4×	2.0k 2.0×	468	20.5k
John D. Pfeifer United States	49	12.7k 2.4×	1.6k 1.4×	1.3k 1.1×	2.3k 2.2×	2.1k 2.1×	176	20.8k
Sándor Vajda United States	58	12.0k 2.2×	606 0.5×	809 0.7×	1.3k 1.3×	713 0.7×	239	16.6k
Shankar Subramaniam United States	61	11.6k 2.2×	2.2k 1.9×	1.5k 1.3×	1.7k 1.6×	1.0k 1.0×	221	16.6k
George Poste United States	65	8.3k 1.5×	530 0.5×	723 0.6×	2.1k 2.0×	1.0k 1.0×	259	15.1k
G.T. Montelione United States	66	12.5k 2.3×	2.5k 2.1×	976 0.9×	1.0k 1.0×	1.2k 1.3×	360	16.1k
Dong‐Qing Wei China	57	6.8k 1.3×	587 0.5×	946 0.8×	819 0.8×	311 0.3×	584	12.9k
Alexandre M. J. J. Bonvin Netherlands	68	17.6k 3.3×	1.6k 1.4×	816 0.7×	1.7k 1.6×	1.7k 1.8×	265	22.5k

Countries citing papers authored by Roger E. Bumgarner

Since Specialization

Citations

This map shows the geographic impact of Roger E. Bumgarner's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Roger E. Bumgarner with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Roger E. Bumgarner more than expected).

Fields of papers citing papers by Roger E. Bumgarner

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Roger E. Bumgarner. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Roger E. Bumgarner. The network helps show where Roger E. Bumgarner may publish in the future.

Co-authorship network of co-authors of Roger E. Bumgarner

This figure shows the co-authorship network connecting the top 25 collaborators of Roger E. Bumgarner. A scholar is included among the top collaborators of Roger E. Bumgarner based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Roger E. Bumgarner. Roger E. Bumgarner is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Hsu, Jason E., Roger E. Bumgarner, Lori Bourassa, et al.. (2022). What do positive and negative Cutibacterium culture results in periprosthetic shoulder infection mean? A multi-institutional control study. Journal of Shoulder and Elbow Surgery. 31(8). 1713–1720. 5 indexed citations

Kittichotirat, Weerayuth, Roger E. Bumgarner, & Casey Chen. (2022). Genomic Islands Shape the Genetic Background of Both JP2 and Non-JP2 Aggregatibacter actinomycetemcomitans. Pathogens. 11(9). 1037–1037. 4 indexed citations

Tjokro, Natalia O., et al.. (2019). Transcriptomic Analysis of Aggregatibacter actinomycetemcomitans Core and Accessory Genes in Different Growth Conditions. Pathogens. 8(4). 282–282. 2 indexed citations

Hsu, Jason E., Roger E. Bumgarner, & Frederick A. Matsen. (2016). Current concepts review. 98(7). 597–606. 43 indexed citations

Sedlak, Ruth Hall, Shu Liang, Nixon Niyonzima, et al.. (2016). Digital detection of endonuclease mediated gene disruption in the HIV provirus. Scientific Reports. 6(1). 20064–20064. 21 indexed citations

Lawrence, Paulraj K., et al.. (2014). Genome-Wide Association Studies of Virulent and Avirulent Haemophilus parasuis Serotype 4 Strains. Genome Announcements. 2(5). 4 indexed citations

Beck, Ingrid A., et al.. (2014). Validation of an Oligonucleotide Ligation Assay for Quantification of Human Immunodeficiency Virus Type 1 Drug-Resistant Mutants by Use of Massively Parallel Sequencing. Journal of Clinical Microbiology. 52(7). 2320–2327. 16 indexed citations

Lo, Kenneth, Adrian E. Raftery, Kenneth M. Dombek, et al.. (2012). Integrating external biological knowledge in the construction of regulatory networks from time-series expression data. BMC Systems Biology. 6(1). 101–101. 41 indexed citations

Sun, Jianxun, Orapin V. Horst, Roger E. Bumgarner, et al.. (2012). Laser capture microdissection enables cellular and molecular studies of tooth root development. International Journal of Oral Science. 4(1). 7–13. 16 indexed citations

10.

Tanaka, Susumu, Yumi Yamaguchi‐Kabata, Hideki Hanaoka, et al.. (2011). A prioritization analysis of disease association by data-mining of functional annotation of human genes. Genomics. 99(1). 1–9. 8 indexed citations

11.

Bumgarner, Roger E., et al.. (2009). Computational Systems Biology. Methods in molecular biology. 19 indexed citations

12.

Oehler, Vivian G., et al.. (2009). The derivation of diagnostic markers of chronic myeloid leukemia progression from microarray data. Blood. 114(15). 3292–3298. 78 indexed citations

13.

Chang, Dong, Shinichi Hayashi, Sina A. Gharib, et al.. (2008). Proteomic and Computational Analysis of Bronchoalveolar Proteins during the Course of the Acute Respiratory Distress Syndrome. American Journal of Respiratory and Critical Care Medicine. 178(7). 701–709. 63 indexed citations

14.

Bumgarner, Roger E., et al.. (2006). Identification of high and low responders to lipopolysaccharide in normal subjects: an unbiased approach to identify modulators of innate immunity. The Journal of Immunology. 176(4). 2669–2669. 1 indexed citations

15.

Wurfel, Mark M., Frank Radella, John Ruzinski, et al.. (2005). Identification of High and Low Responders to Lipopolysaccharide in Normal Subjects: An Unbiased Approach to Identify Modulators of Innate Immunity. The Journal of Immunology. 175(4). 2570–2578. 94 indexed citations

16.

Yeung, Ka Yee, Mario Medvedovic, & Roger E. Bumgarner. (2004). From co-expression to co-regulation: how many microarray experiments do we need?. Genome biology. 5(7). R48–R48. 77 indexed citations

17.

Li, Jiangning, et al.. (2003). RNA amplification, fidelity and reproducibility of expression profiling. Comptes Rendus Biologies. 326(10-11). 1021–1030. 16 indexed citations

18.

Geiss, Gary, et al.. (2001). A Comprehensive View of Regulation of Gene Expression by Double-stranded RNA-mediated Cell Signaling. Journal of Biological Chemistry. 276(32). 30178–30182. 184 indexed citations

19.

Geiss, Gary, Roger E. Bumgarner, Mahru C. An, et al.. (2000). Large-Scale Monitoring of Host Cell Gene Expression during HIV-1 Infection Using cDNA Microarrays. Virology. 266(1). 8–16. 215 indexed citations

20.

Bumgarner, Roger E. & Geoffrey A. Blake. (1989). Microwave direct absorption spectroscopy of weakly-bound clusters in a planar supersonic jet: Spectra of Ar-HCN and (HCN)2 from 17.4 to 76.7 GHz. Chemical Physics Letters. 161(4-5). 308–314. 46 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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