Stacy Ciufo

12.0k total citations · 1 hit paper
16 papers, 3.1k citations indexed

About

Stacy Ciufo is a scholar working on Molecular Biology, Ecology and Genetics. According to data from OpenAlex, Stacy Ciufo has authored 16 papers receiving a total of 3.1k indexed citations (citations by other indexed papers that have themselves been cited), including 11 papers in Molecular Biology, 9 papers in Ecology and 3 papers in Genetics. Recurrent topics in Stacy Ciufo's work include Genomics and Phylogenetic Studies (9 papers), Microbial Community Ecology and Physiology (6 papers) and Bacteriophages and microbial interactions (2 papers). Stacy Ciufo is often cited by papers focused on Genomics and Phylogenetic Studies (9 papers), Microbial Community Ecology and Physiology (6 papers) and Bacteriophages and microbial interactions (2 papers). Stacy Ciufo collaborates with scholars based in United States, United Kingdom and Costa Rica. Stacy Ciufo's co-authors include Derek R. Lovley, Kathleen O’Neill, Conrad L. Schoch, Susan E. Childers, Shobha Sharma, Tatiana Tatusova, Boris Fedorov, Seán Turner, Sivakumar Kannan and Igor Tolstoy and has published in prestigious journals such as Nature, Nucleic Acids Research and Genome Research.

In The Last Decade

Stacy Ciufo

16 papers receiving 3.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

NCBI Taxonomy: a comprehensive update on curation, resources and tools

2020 1.2k citations Conrad L. Schoch, Stacy Ciufo et al. Database profile →

Peers

Stacy Ciufo

MB

ECOLO

PS

EE

EC

Jinghua Huang China

Harald Meier Germany

Boyke Bunk Germany

Edward Kirton United States

Andrea Thürmer Germany

Lee Ann McCue United States

Pierre Peyret France

Kathleen O’Neill United States

Cliff Han United States

Adam Skarshewski Australia

Jinghua Huang China

Stacy Ciufo

2.2k ×1.3

MB

1.3k ×1.5

ECOLO

406 ×1.0

PS

121 ×0.4

EE

260 ×0.9

EC

Citations per year, relative to Stacy Ciufo Stacy Ciufo (= 1×) peers Jinghua Huang

Countries citing papers authored by Stacy Ciufo

Since Specialization

Citations

This map shows the geographic impact of Stacy Ciufo's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Stacy Ciufo with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Stacy Ciufo more than expected).

Fields of papers citing papers by Stacy Ciufo

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Stacy Ciufo. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Stacy Ciufo. The network helps show where Stacy Ciufo may publish in the future.

Co-authorship network of co-authors of Stacy Ciufo

This figure shows the co-authorship network connecting the top 25 collaborators of Stacy Ciufo. A scholar is included among the top collaborators of Stacy Ciufo based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Stacy Ciufo. Stacy Ciufo is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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16 of 16 papers shown

1.

Cox, Eric, Mirian T. N. Tsuchiya, Stacy Ciufo, et al.. (2024). NCBI Taxonomy: enhanced access via NCBI Datasets. Nucleic Acids Research. 53(D1). D1711–D1715. 8 indexed citations

2.

Kannan, Sivakumar, Shobha Sharma, Stacy Ciufo, et al.. (2023). Collection and curation of prokaryotic genome assemblies from type strains at NCBI. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 73(1). 7 indexed citations

3.

Schoch, Conrad L., Stacy Ciufo, Carol L. Hotton, et al.. (2020). NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database. 2020. 1179 indexed citations breakdown →

4.

Ciufo, Stacy, Sivakumar Kannan, Shobha Sharma, et al.. (2018). Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY. 68(7). 2386–2392. 308 indexed citations

5.

Sharma, Shobha, et al.. (2018). The NCBI BioCollections Database. Database. 2018. 55 indexed citations

6.

Robbertse, Barbara, Pooja K Strope, Priscila Chaverrí, et al.. (2017). Improving taxonomic accuracy for fungi in public sequence databases: applying ‘one name one species’ in well-defined genera with Trichoderma/Hypocrea as a test case. Database. 2017. 33 indexed citations

7.

Zaslavsky, Leonid, Stacy Ciufo, Boris Fedorov, & Tatiana Tatusova. (2016). Clustering analysis of proteins from microbial genomes at multiple levels of resolution. BMC Bioinformatics. 17(S8). 276–276. 19 indexed citations

8.

Bely, Benoît, Mélanie Courtot, Stacy Ciufo, et al.. (2016). From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF. Database. 2016. baw055–baw055. 17 indexed citations

9.

Tatusova, Tatiana, Stacy Ciufo, Scott Federhen, et al.. (2014). Update on RefSeq microbial genomes resources. Nucleic Acids Research. 43(D1). D599–D605. 101 indexed citations

10.

Tatusova, Tatiana, Stacy Ciufo, Boris Fedorov, et al.. (2014). About Prokaryotic Genome Processing and Tools. 3 indexed citations

11.

Tatusova, Tatiana, Stacy Ciufo, Boris Fedorov, Kathleen O’Neill, & Igor Tolstoy. (2013). RefSeq microbial genomes database: new representation and annotation strategy. Nucleic Acids Research. 42(D1). D553–D559. 360 indexed citations

12.

Klimke, William, Richa Agarwala, Azat Badretdin, et al.. (2008). The National Center for Biotechnology Information's Protein Clusters Database. Nucleic Acids Research. 37(suppl_1). D216–D223. 205 indexed citations

13.

Childers, Susan E., Stacy Ciufo, & Derek R. Lovley. (2002). Geobacter metallireducens accesses insoluble Fe(iii) oxide by chemotaxis. Nature. 416(6882). 767–769. 350 indexed citations

14.

Chapelle, Francis H., Kathleen O’Neill, Paul M. Bradley, et al.. (2002). A hydrogen-based subsurface microbial community dominated by methanogens. Nature. 415(6869). 312–315. 339 indexed citations

15.

Ng, Wailap Victor, Stacy Ciufo, T. M. F. Smith, et al.. (1998). Snapshot of a Large Dynamic Replicon in a Halophilic Archaeon: Megaplasmid or Minichromosome?. Genome Research. 8(11). 1131–1141. 80 indexed citations

16.

Ambady, Sakthikumar, Stacy Ciufo, James M. Robl, J. Robert Smyth, & F. Abel Ponce de Léon. (1997). Development of a Chicken Z-Chromosome-Specific DNA Library. Journal of Heredity. 88(3). 247–249. 9 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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