Robert J. Prill

8.0k citations

17 papers · 3.0k indexed · 2 hit papers · h-index 15

Impact in

Molecular Biology top 5%
- Gene Regulatory Network Analysis
- Bioinformatics and Genomic Networks
- Gene expression and cancer classification
- Microbial Metabolic Engineering and Bioproduction
- Single-cell and spatial transcriptomics
- Genomics and Phylogenetic Studies
- Genomics and Chromatin Dynamics
Biophysics top 5%

Papers in

Biophysics 2
- Cell Image Analysis Techniques 2
Molecular Biology 16
- Bioinformatics and Genomic Networks 10
- Gene Regulatory Network Analysis 6
- Single-cell and spatial transcriptomics 2
- Gut microbiota and health 2
- Genomics and Phylogenetic Studies 2
- Gene expression and cancer classification 2
- Genetics, Bioinformatics, and Biomedical Research 2

Co-authors: Gustavo Stolovitzky Daniel Marbach Diogo M. Camacho James J. Collins Nic M. Vega Kyle R. Allison Robert Küffner James C. Costello
Journals: PLoS ONE (4 papers)Nature Methods (1 paper)PLoS Biology (1 paper)Molecular Ecology (1 paper)Journal of Biological Chemistry (1 paper)
Partner nations: United States United Kingdom Switzerland

In The Last Decade

Robert J. Prill

17 papers receiving 2.9k citations

Hit Papers

align trajectories log scale

Wisdom of crowds for robust gene network inference 2012 · 1.1k citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2012 Nature Methods
2010 Proceedings of the National Academy of Sciences

Peers

Countries citing papers authored by Robert J. Prill

Since Specialization

Citations

This map shows the geographic impact of Robert J. Prill's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Robert J. Prill with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Robert J. Prill more than expected).

Fields of papers citing papers by Robert J. Prill

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Robert J. Prill. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Robert J. Prill. The network helps show where Robert J. Prill may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Robert J. Prill, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Robert J. Prill Line = papers co-authored together Robert J. Prill links everyone, so they are left out of the graph.

All Works

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17 of 17 papers shown

#	Work
1	Food authentication from shotgun sequencing reads with an application on high protein powders npj Science of Food ·Niina Haiminen, Stefan Edlund, D. D. Chambliss, Mark Kunitomi, Bart C. Weimer, Balasubramanian Ganesan, Robert C. Baker, Peter J. Markwell, Matthew A. Davis, Bihua C. Huang, Nguyet Kong, Robert J. Prill, 克征國藤, GJ Morton, Sravanthi S. Bhanu, Géraud Dubois, James H. Kaufman, Laxmi Parida, Kristen L. Beck	2019	26
2	Filthy lucre: A metagenomic pilot study of microbes found on circulating currency in New York City PLoS ONE ·Julia M. Maritz, Steven A. Sullivan, Robert J. Prill, Emre Aksoy, Adam Laws, Jane M. Carlton	2017	14
3	Comprehensive benchmarking and ensemble approaches for metagenomic classifiers Genome biology ·Alexa B. R. McIntyre, Rachid Ounit, Ebrahim Afshinnekoo, Robert J. Prill, Elizabeth Hénaff, Noah Alexander, Samuel S. Minot, David Danko, Jonathan Foox, Sofia Ahsanuddin, Scott Tighe, Nur A. Hasan, Poorani Subramanian, Kelly Moffat, Shawn Levy, Stefano Lonardi, Nick Greenfield, Rita R. Colwell, Gail Rosen, Christopher E. Mason	2017	190
4	A computational method for designing diverse linear epitopes including citrullinated peptides with desired binding affinities to intravenous immunoglobulin BMC Bioinformatics ·Rob Patro, Raquel Norel, Robert J. Prill, Julio Sáez-Rodríguez, Peter Lorenz, T.M. Logvinchuk, Byung-Pal Yu, Mitja Luštrek, Nicola Barbarini, A A Jorge Mora, Riccardo Bellazzi, Hans‐Jürgen Thiesen, Gustavo Stolovitzky, Carl Kingsford	2016	2
5	Microbiome changes through ontogeny of a tick pathogen vector Molecular Ecology ·Christine P. Zolnik, Robert J. Prill, Richard C. Falco, Thomas J. Daniels, Sergios‐Orestis Kolokotronis	2016	107
6	Noise-Driven Causal Inference in Biomolecular Networks PLoS ONE ·Robert J. Prill, Robert Vogel, Guillermo Cecchi, Grégoire Altan‐Bonnet, Gustavo Stolovitzky	2015	15
7	Wisdom of crowds for robust gene network inference Nature Methods ·Daniel Marbach, James C. Costello, Robert Küffner, Nic M. Vega, Robert J. Prill, Diogo M. Camacho, Kyle R. Allison, Manolis Kellis, James J. Collins, Gustavo Stolovitzky Hit paper breakdown →	2012	1110
8	Wisdom of crowds for robust gene network inference. PubMed ·Daniel Marbach, James C. Costello, Robert Küffner, Nic M. Vega, Robert J. Prill, Diogo M. Camacho, Kyle R. Allison, Bastiaan Willems, Manolis Kellis, James J. Collins	2012	5
9	BlueSNP: R package for highly scalable genome-wide association studies using Hadoop clusters Bioinformatics ·Hailiang Huang, Sandeep Tata, Robert J. Prill	2012	22
10	Crowdsourcing Network Inference: The DREAM Predictive Signaling Network Challenge Meeting Information: The DREAM4 Predictive Signaling Network Challenge took place in the summer of 2009. Results were presented at the DREAM4 conference, December 2009, The Broad Institute of MIT and Harvard, Cambridge, Massachusetts. Science Signaling ·Robert J. Prill, Julio Sáez-Rodríguez, Leonidas G. Alexopoulos, Peter K. Sorger, Gustavo Stolovitzky	2011	77
11	Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges PLoS ONE ·Robert J. Prill, Daniel Marbach, Julio Sáez-Rodríguez, Peter K. Sorger, Leonidas G. Alexopoulos, Xiaowei Xue, Neil D. Clarke, Grégoire Altan‐Bonnet, Gustavo Stolovitzky	2010	297
12	Revealing strengths and weaknesses of methods for gene network inference Proceedings of the National Academy of Sciences ·Daniel Marbach, Robert J. Prill, Thomas Schaffter, Claudio Mattiussi, Dario Floreano, Gustavo Stolovitzky Hit paper breakdown →	2010	520
13	Correction: Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges PLoS ONE ·Robert J. Prill, Daniel Marbach, Julio Sáez-Rodríguez, Peter K. Sorger, Leonidas G. Alexopoulos, Xiaowei Xue, Neil D. Clarke, Grégoire Altan‐Bonnet, Gustavo Stolovitzky	2010	61
14	Lessons from the DREAM2 Challenges Annals of the New York Academy of Sciences ·Gustavo Stolovitzky, Robert J. Prill, Andrea Califano	2009	142
15	Dynamic Properties of Network Motifs Contribute to Biological Network Organization PLoS Biology ·Robert J. Prill, Pablo A. Iglesias, Andre Levchenko	2005	278
16	Mapping the Ribonucleolytic Active Site of Eosinophil-derived Neurotoxin (EDN) Journal of Biological Chemistry ·D.D. Leonidas, Ester Boix, Robert J. Prill, Motoshi Suzuki, R. Turton, Karen Reaume, G. Jawahar Swaminathan, Richard J. Youle, K. Ravi Acharya	2001	39
17	Engineering receptor-mediated cytotoxicity into human ribonucleases by steric blockade of inhibitor interaction Nature Biotechnology ·Motoshi Suzuki, Shailendra K. Saxena, Ester Boix, Robert J. Prill, Veena M. Vasandani, Jane E. Ladner, Cynthia Sung, Richard J. Youle	1999	57

About Robert J. Prill

Robert J. Prill is a scholar working on Biophysics, Molecular Biology, Parasitology, Insect Science and Ecology, having authored 17 papers that have together received 3.0k indexed citations. Recurring topics across this work include Bioinformatics and Genomic Networks (10 papers), Gene Regulatory Network Analysis (6 papers), Cell Image Analysis Techniques (2 papers), Single-cell and spatial transcriptomics (2 papers), Gut microbiota and health (2 papers), Genomics and Phylogenetic Studies (2 papers), Gene expression and cancer classification (2 papers) and Genetics, Bioinformatics, and Biomedical Research (2 papers). The work is most often cited by research in Molecular Biology (2.4k citations), Biophysics (94 citations), Parasitology (98 citations), Statistical and Nonlinear Physics (129 citations) and Computational Theory and Mathematics (160 citations). Robert J. Prill has collaborated with scholars based in United States, United Kingdom and Switzerland. Frequent co-authors include Gustavo Stolovitzky, Daniel Marbach, Diogo M. Camacho, James J. Collins, Nic M. Vega, Kyle R. Allison, Robert Küffner, James C. Costello, Manolis Kellis and Andre Levchenko. Their work appears in journals such as PLoS ONE, Nature Methods, PLoS Biology, Molecular Ecology and Journal of Biological Chemistry.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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