Séan O’Donoghue

6.5k total citations · 1 hit paper
69 papers, 4.2k citations indexed

About

Séan O’Donoghue is a scholar working on Molecular Biology, Materials Chemistry and Computer Vision and Pattern Recognition. According to data from OpenAlex, Séan O’Donoghue has authored 69 papers receiving a total of 4.2k indexed citations (citations by other indexed papers that have themselves been cited), including 49 papers in Molecular Biology, 14 papers in Materials Chemistry and 9 papers in Computer Vision and Pattern Recognition. Recurrent topics in Séan O’Donoghue's work include Bioinformatics and Genomic Networks (20 papers), Protein Structure and Dynamics (19 papers) and Enzyme Structure and Function (11 papers). Séan O’Donoghue is often cited by papers focused on Bioinformatics and Genomic Networks (20 papers), Protein Structure and Dynamics (19 papers) and Enzyme Structure and Function (11 papers). Séan O’Donoghue collaborates with scholars based in Australia, Germany and United Kingdom. Séan O’Donoghue's co-authors include Michaël Nilges, Reinhard Schneider, Miguel A. Andrade‐Navarro, Jens P. Linge, Christian Stolte, Hartmut Oschkinat, María J. Macias, Lars Juhl Jensen, Burkhard Rost and Carlo Petosa and has published in prestigious journals such as Cell, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

Séan O’Donoghue

69 papers receiving 4.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

COMPARTMENTS: unification and visualization of protein subcellular localization evidence

2014 432 citations Christian Stolte, Séan O’Donoghue et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Séan O’Donoghue Australia	29	3.3k	453	329	319	302	69	4.2k
Nathalie Reuter Norway	34	2.1k 0.6×	558 1.2×	167 0.5×	241 0.8×	239 0.8×	94	3.3k
Tobias Madl Austria	46	4.7k 1.4×	689 1.5×	279 0.8×	483 1.5×	416 1.4×	192	6.5k
Andrew Leaver‐Fay United States	21	5.4k 1.6×	1.4k 3.1×	621 1.9×	236 0.7×	367 1.2×	28	7.6k
John Jumper United States	15	4.1k 1.2×	1.3k 2.8×	526 1.6×	415 1.3×	207 0.7×	24	5.7k
Andrei T. Alexandrescu United States	33	2.1k 0.6×	730 1.6×	238 0.7×	371 1.2×	271 0.9×	93	3.2k
Matteo Dal Peraro Switzerland	43	3.5k 1.1×	596 1.3×	635 1.9×	221 0.7×	289 1.0×	139	5.6k
Arnon Lavie United States	36	2.2k 0.7×	494 1.1×	336 1.0×	141 0.4×	311 1.0×	126	3.8k
Anne‐Claude Gavin Germany	41	5.3k 1.6×	288 0.6×	432 1.3×	490 1.5×	793 2.6×	91	6.7k
Paul Müeller United States	33	4.6k 1.4×	165 0.4×	259 0.8×	408 1.3×	289 1.0×	105	6.7k
Thomas F. Holzman United States	30	2.5k 0.8×	326 0.7×	199 0.6×	202 0.6×	147 0.5×	65	3.7k

Countries citing papers authored by Séan O’Donoghue

Since Specialization

Citations

This map shows the geographic impact of Séan O’Donoghue's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Séan O’Donoghue with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Séan O’Donoghue more than expected).

Fields of papers citing papers by Séan O’Donoghue

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Séan O’Donoghue. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Séan O’Donoghue. The network helps show where Séan O’Donoghue may publish in the future.

Co-authorship network of co-authors of Séan O’Donoghue

This figure shows the co-authorship network connecting the top 25 collaborators of Séan O’Donoghue. A scholar is included among the top collaborators of Séan O’Donoghue based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Séan O’Donoghue. Séan O’Donoghue is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Munoz, Marcia A., Etienne Masle‐Farquhar, Julie Jurczyluk, et al.. (2022). Increased core body temperature exacerbates defective protein prenylation in mouse models of mevalonate kinase deficiency. Journal of Clinical Investigation. 132(19). 4 indexed citations

O’Donoghue, Séan, Andrea Schafferhans, Christian Stolte, et al.. (2021). SARS‐CoV‐2 structural coverage map reveals viral protein assembly, mimicry, and hijacking mechanisms. Molecular Systems Biology. 17(9). e10079–e10079. 22 indexed citations

Burgess, Andrew, et al.. (2019). SnapShot: S-Phase Entry and Exit. Cell. 179(3). 802–802.e1. 3 indexed citations

Rosa, Alessandro Pasquale De, et al.. (2017). The Dark Proteome Database. BioData Mining. 10(1). 10 indexed citations

Taberlay, Phillippa C., Joanna Achinger-Kawecka, Aaron T. L. Lun, et al.. (2016). Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations. Genome Research. 26(6). 719–731. 208 indexed citations

Stolte, Christian, et al.. (2015). SnapShot: Insulin/IGF1 Signaling. Cell. 161(4). 948–948.e1. 14 indexed citations

Stolte, Christian, et al.. (2013). Visual analytics of phosphorylation time-series data on insulin response. AIP conference proceedings. 185–196. 3 indexed citations

Sabir, Kenneth S., Christian Stolte, Bruce Tabor, & Séan O’Donoghue. (2013). The Molecular Control Toolkit: Controlling 3D molecular graphics via gesture and voice. 49–56. 31 indexed citations

O’Donoghue, Séan, Anne‐Claude Gavin, Nils Gehlenborg, et al.. (2010). Visualizing biological data—now and in the future. Nature Methods. 7(S3). S2–S4. 92 indexed citations

10.

Gehlenborg, Nils, Séan O’Donoghue, Nitin S. Baliga, et al.. (2010). Visualization of omics data for systems biology. Nature Methods. 7(S3). S56–S68. 423 indexed citations

11.

Altman, Russ B., Casey Bergman, Judith A. Blake, et al.. (2008). Text mining for biology - the way forward: opinions from leading scientists. Genome biology. 9(S2). S7–S7. 64 indexed citations

12.

Nilges, Michaël, Michael Habeck, Séan O’Donoghue, & Wolfgang Rieping. (2006). Error distribution derived NOE distance restraints. Proteins Structure Function and Bioinformatics. 64(3). 652–664. 10 indexed citations

13.

Andrade‐Navarro, Miguel A., Séan O’Donoghue, & Burkhard Rost. (1998). Adaptation of protein surfaces to subcellular location 1 1Edited by F. E. Cohen. Journal of Molecular Biology. 276(2). 517–525. 144 indexed citations

14.

O’Donoghue, Séan & Michaël Nilges. (1997). Tertiary structure prediction using mean-force potentials and internal energy functions: successful prediction for coiled-coil geometries. PubMed. 2(4). S47–S52. 15 indexed citations

15.

Fletcher, Jamie I., Ross Smith, Séan O’Donoghue, et al.. (1997). The structure of a novel insecticidal neurotoxin, ω-atracotoxin-HV1, from the venom of an Australian funnel web spider. Nature Structural Biology. 4(7). 559–566. 156 indexed citations

16.

O’Donoghue, Séan, et al.. (1996). High Resolution NMR Solution Structure of the Leucine Zipper Domain of the c-Jun Homodimer. Journal of Biological Chemistry. 271(23). 13663–13667. 83 indexed citations

17.

Williams, Neal K., et al.. (1995). Catalysis by Hamster Dihydroorotase: Zinc Binding, Site-Directed Mutagenesis, and Interaction with Inhibitors. Biochemistry. 34(36). 11344–11352. 29 indexed citations

18.

Rae, Caroline, Séan O’Donoghue, William A. Bubb, & Philip W. Kuchel. (1994). Stereospecificity of Substrate Usage by Glyoxalase 1: Nuclear Magnetic Resonance Studies of Kinetics and Hemithioacetal Substrate Conformation. Biochemistry. 33(12). 3548–3559. 15 indexed citations

19.

O’Donoghue, Séan, et al.. (1992). Solution structure of endothelin-3 determined using NMR spectroscopy. Biochemistry. 31(24). 5640–5645. 30 indexed citations

20.

Miki, Masao, Séan O’Donoghue, & Cristobal G. dos Remedios. (1992). Structure of actin observed by fluorescence resonance energy transfer spectroscopy. Journal of Muscle Research and Cell Motility. 13(2). 132–145. 38 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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