Pamela J. Thomas

12.2k total citations · 1 hit paper
35 papers, 2.1k citations indexed

About

Pamela J. Thomas is a scholar working on Molecular Biology, Plant Science and Genetics. According to data from OpenAlex, Pamela J. Thomas has authored 35 papers receiving a total of 2.1k indexed citations (citations by other indexed papers that have themselves been cited), including 14 papers in Molecular Biology, 11 papers in Plant Science and 7 papers in Genetics. Recurrent topics in Pamela J. Thomas's work include Chromosomal and Genetic Variations (8 papers), Genomics and Phylogenetic Studies (5 papers) and Vibrio bacteria research studies (4 papers). Pamela J. Thomas is often cited by papers focused on Chromosomal and Genetic Variations (8 papers), Genomics and Phylogenetic Studies (5 papers) and Vibrio bacteria research studies (4 papers). Pamela J. Thomas collaborates with scholars based in United States, United Kingdom and Gambia. Pamela J. Thomas's co-authors include Julia A. Segre, Tara N. Palmore, David K. Henderson, Adrian M. Zelazny, Evan S. Snitkin, Frida Stock, Eric D. Green, Webb Miller, Brent Ewing and Phil Green and has published in prestigious journals such as New England Journal of Medicine, Proceedings of the National Academy of Sciences and Nature Genetics.

In The Last Decade

Pamela J. Thomas

33 papers receiving 2.0k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Tracking a Hospital Outbreak of Carbapenem-Resistant Klebsiella pneumoniae with Whole-Genome Sequencing

2012 647 citations Evan S. Snitkin, Adrian M. Zelazny et al. Science Translational Medicine profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Pamela J. Thomas United States	21	979	621	297	290	278	35	2.1k
Qin Qi China	22	824 0.8×	300 0.5×	334 1.1×	124 0.4×	130 0.5×	73	1.9k
Sean C. Daugherty United States	24	1.0k 1.0×	171 0.3×	247 0.8×	216 0.7×	333 1.2×	45	2.4k
Grégory Gimenez France	23	1.4k 1.4×	100 0.2×	174 0.6×	251 0.9×	246 0.9×	61	2.6k
Ilana Brito United States	27	1.6k 1.7×	320 0.5×	251 0.8×	121 0.4×	125 0.4×	70	2.6k
Guillaume Jospin United States	16	1.3k 1.4×	218 0.4×	151 0.5×	250 0.9×	308 1.1×	61	2.5k
Jens Roat Kultima Germany	12	1.6k 1.7×	207 0.3×	270 0.9×	92 0.3×	210 0.8×	15	2.4k
Michael E. Hibbing United States	14	1.4k 1.4×	256 0.4×	403 1.4×	533 1.8×	759 2.7×	17	3.1k
Garry Blakely United Kingdom	16	821 0.8×	135 0.2×	500 1.7×	164 0.6×	158 0.6×	19	1.5k
Joshua P. Ramsay Australia	22	1.0k 1.0×	214 0.3×	589 2.0×	95 0.3×	415 1.5×	61	1.9k
Wei Shen China	24	2.0k 2.1×	205 0.3×	428 1.4×	212 0.7×	615 2.2×	67	3.6k

Countries citing papers authored by Pamela J. Thomas

Since Specialization

Citations

This map shows the geographic impact of Pamela J. Thomas's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Pamela J. Thomas with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Pamela J. Thomas more than expected).

Fields of papers citing papers by Pamela J. Thomas

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Pamela J. Thomas. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Pamela J. Thomas. The network helps show where Pamela J. Thomas may publish in the future.

Co-authorship network of co-authors of Pamela J. Thomas

This figure shows the co-authorship network connecting the top 25 collaborators of Pamela J. Thomas. A scholar is included among the top collaborators of Pamela J. Thomas based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Pamela J. Thomas. Pamela J. Thomas is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Conlan, Sean, Poorani Subramanian, Jung-Ho Youn, et al.. (2024). Whole-genome sequence of Mucor velutinosus NIH1002, a strain associated with disseminated disease. Microbiology Resource Announcements. 13(7). e0006224–e0006224.

Huang, Xin, Rory M. Welsh, Clay Deming, et al.. (2021). Skin Metagenomic Sequence Analysis of Early Candida auris Outbreaks in U.S. Nursing Homes. mSphere. 6(4). e0028721–e0028721. 29 indexed citations

Hirst, David J., Martín Brandt, Gordon Bruton, et al.. (2020). Structure-based optimisation of orally active & reversible MetAP-2 inhibitors maintaining a tight ‘molecular budget’. Bioorganic & Medicinal Chemistry Letters. 30(21). 127533–127533. 6 indexed citations

Conlan, Sean, Anna F. Lau, Clay Deming, et al.. (2019). Plasmid Dissemination and Selection of a Multidrug-Resistant Klebsiella pneumoniae Strain during Transplant-Associated Antibiotic Therapy. mBio. 10(5). 14 indexed citations

Walker, Ann L., Alexis Denis, Ryan P. Bingham, et al.. (2019). Design and development of a series of borocycles as selective, covalent kallikrein 5 inhibitors. Bioorganic & Medicinal Chemistry Letters. 29(20). 126675–126675. 6 indexed citations

Johnson, Ryan C., Clay Deming, Sean Conlan, et al.. (2018). Investigation of a Cluster of Sphingomonas koreensis Infections. New England Journal of Medicine. 379(26). 2529–2539. 41 indexed citations

Weingarten, Rebecca A., Ryan C. Johnson, Sean Conlan, et al.. (2018). Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of Bacterial Plasmids Conferring Carbapenem Resistance. mBio. 9(1). 141 indexed citations

Snitkin, Evan S., Adrian M. Zelazny, Pamela J. Thomas, et al.. (2012). Tracking a Hospital Outbreak of Carbapenem-Resistant Klebsiella pneumoniae with Whole-Genome Sequencing. Science Translational Medicine. 4(148). 148ra116–148ra116. 647 indexed citations breakdown →

McGraw, Lisa A., et al.. (2012). BAC-Based Sequencing of Behaviorally-Relevant Genes in the Prairie Vole. PLoS ONE. 7(1). e29345–e29345. 7 indexed citations

10.

Thomas, Pamela J., et al.. (2011). Haplotype-Based Genomic Sequencing of a Chromosomal Polymorphism in the White-Throated Sparrow (Zonotrichia albicollis). Journal of Heredity. 102(4). 380–390. 26 indexed citations

11.

Schueler, Mary G., et al.. (2010). Adaptive Evolution of Foundation Kinetochore Proteins in Primates. Molecular Biology and Evolution. 27(7). 1585–1597. 62 indexed citations

12.

Thomas, Pamela J., et al.. (2010). A W-linked palindrome and gene conversion in New World sparrows and blackbirds. Chromosome Research. 18(5). 543–553. 22 indexed citations

13.

Blakesley, Robert W., Nancy F. Hansen, Jyoti Gupta, et al.. (2010). Effort required to finish shotgun-generated genome sequences differs significantly among vertebrates. BMC Genomics. 11(1). 21–21. 11 indexed citations

14.

Green, Phil, et al.. (2003). Transcription-associated mutational asymmetry in mammalian evolution. Nature Genetics. 33(4). 514–517. 229 indexed citations

15.

DeSilva, Udaya, Laura Elnitski, Jacquelyn R. Idol, et al.. (2002). Generation and Comparative Analysis of ∼3.3 Mb of Mouse Genomic Sequence Orthologous to the Region of Human Chromosome 7q11.23 Implicated in Williams Syndrome. Genome Research. 12(1). 3–15. 60 indexed citations

16.

Thomas, James W., Arjun Prasad, Shih-Queen Lee-Lin, et al.. (2002). Parallel Construction of Orthologous Sequence-Ready Clone Contig Maps in Multiple Species. Genome Research. 12(8). 1277–1285. 56 indexed citations

17.

Thomas, James W., Mary G. Schueler, Robert W. Blakesley, et al.. (2002). Pericentromeric Duplications in the Laboratory Mouse. Genome Research. 13(1). 55–63. 30 indexed citations

18.

Lindsay, Steve W., Pedro L. Alonso, Joanna Schellenberg, et al.. (1993). A malaria control trial using insecticide-treated bed nets and targeted chemoprophylaxis in a rural area of The Gambia, West Africa. Transactions of the Royal Society of Tropical Medicine and Hygiene. 87. 19–23. 39 indexed citations

19.

Hoffrén, Anna‐Marja, Markku Saloheimo, Pamela J. Thomas, et al.. (1993). Modelling of the lignin peroxidase LIII of Phlebia radiata: use of a sequence template generated from a 3-D structure. Protein Engineering Design and Selection. 6(2). 177–182. 3 indexed citations

20.

Riley, Eleanor M., Stephen Allen, S.C.J. Bennett, et al.. (1990). Recognition of dominant T cell-stimulating epitopes from the circumsporozoite protein of Plasmodium falciparum and relationship to malaria morbidity in Gambian children. Transactions of the Royal Society of Tropical Medicine and Hygiene. 84(5). 648–657. 65 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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