Scott Schwartz

23.2k citations

36 papers · 8.4k indexed · 4 hit papers · h-index 25

Impact in

Molecular Biology top 1%
- Genomics and Phylogenetic Studies
- RNA and protein synthesis mechanisms
- Genomics and Chromatin Dynamics
- RNA Research and Splicing
Genetics top 1%
- Genetic diversity and population structure

Papers in

Molecular Biology 28
- RNA and protein synthesis mechanisms 17
- Genomics and Phylogenetic Studies 15
- Machine Learning in Bioinformatics 5
- Genomics and Chromatin Dynamics 4
Statistics and Probability 3
- Statistical Methods and Bayesian Inference 2

Co-authors: Webb Miller Zheng Zhang Lukas Wagner Ross C. Hardison Arian F. A. Smit David Haussler W. James Kent Cathy Riemer
Journals: Genome Research (8 papers)Genomics (3 papers)Genome biology (2 papers)Nucleic Acids Research (2 papers)Statistics in Medicine (2 papers)
Partner nations: United States Russia Australia

In The Last Decade

Scott Schwartz

35 papers receiving 8.2k citations

Hit Papers

align trajectories log scale

A universal SNP and small-indel variant caller using deep neural networks 2018 · 757 citations

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if any of the following hold:

it has ≥500 total citations;
it reaches ≥1.5× the top-1% citation threshold for papers in the same subfield and year (the threshold is the minimum needed to enter the top 1%, not the average within it);
it reaches the top citation threshold in at least one of its specific research topics.

2018 Nature Biotechnology
2002 Genome Research
2000 Journal of Computational Biology
2000 Genome Research

Peers

Countries citing papers authored by Scott Schwartz

Since Specialization

Citations

This map shows the geographic impact of Scott Schwartz's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Scott Schwartz with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Scott Schwartz more than expected).

Fields of papers citing papers by Scott Schwartz

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Scott Schwartz. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Scott Schwartz. The network helps show where Scott Schwartz may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Scott Schwartz, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Scott Schwartz Line = papers co-authored together Scott Schwartz links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae Genome biology ·Chenxi Qiu, Huiyan Jin, Irina O. Vvedenskaya, Schalles Green, Tingting Zhao, Indranil Malik, 尚志今野, Scott Schwartz, Ping Cui, Pavel Čabart, Мадина Наилевна Хадыева, William Lai, Richard P. Metz, Charles D. Johnson, Sing-Hoi Sze, B. Franklin Pugh, Bryce E. Nickels, Craig D. Kaplan	2020	30
2	Complex interactions between day length and diurnal patterns of gene expression drive photoperiodic responses in a perennial C₄ grass Plant Cell & Environment ·Xiaoyu Weng, John T. Lovell, Scott Schwartz, Changde Cheng, Taslima Haque, Li Zhang, Samsad Razzaque, Thomas Juenger	2019	15
3	Early Exposure to a High Fat/High Sugar Diet Increases the Mammary Stem Cell Compartment and Mammary Tumor Risk in Female Mice Cancer Prevention Research ·Isabel Lambertz, Linjie Luo, Thomas R. Berton, Scott Schwartz, Stephen D. Hursting, Claudio J. Conti, Robin Fuchs‐Young	2017	11
4	Drought responsive gene expression regulatory divergence between upland and lowland ecotypes of a perennial C₄grass Genome Research ·John T. Lovell, Scott Schwartz, David B. Lowry, Eugene V. Shakirov, Jason Bonnette, Xiaoyu Weng, Mei Wang, Jenifer Johnson, Avinash Sreedasyam, Christopher Plott, Jerry Jenkins, Jeremy Schmutz, Thomas Juenger	2016	41
5	Host-Microbe Interactions in the Neonatal Intestine: Role of Human Milk Oligosaccharides Advances in Nutrition ·Sharon M. Donovan, Mei Wang, Min Li, Iddo Friedberg, Scott Schwartz, Robert S. Chapkin	2012	82
6	Joint Bayesian analysis of birthweight and censored gestational age using finite mixture models Statistics in Medicine ·Scott Schwartz, Alan E. Gelfand, Marie Lynn Miranda	2010	15
7	Patterns of Insertions and Their Covariation With Substitutions in the Rat, Mouse, and Human Genomes Genome Research ·Shan Yang, Arian F. A. Smit, Scott Schwartz, Francesca Chiaromonte, Krishna M. Roskin, David Haussler, Webb Miller, Ross C. Hardison	2004	64
8	MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequences Nucleic Acids Research ·Scott Schwartz	2003	183
9	Global Predictions and Tests of Erythroid Regulatory Regions Cold Spring Harbor Symposia on Quantitative Biology ·Ross C. Hardison, Francesca Chiaromonte, Diana L. Kolbe, Sheng Xu, Hanna M. Petrykowska, Laura Elnitski, Shan Yang, Belinda Giardine, Ying Zhang, Cathy Riemer, Scott Schwartz, David Haussler, Krishna M. Roskin, R. Weber, Mark Diekhans, W. James Kent, Mitchell J. Weiss, John J. Welch, Webb Miller	2003	7
10	GALA, a Database for Genomic Sequence Alignments and Annotations Genome Research ·Belinda Giardine, Laura Elnitski, Cathy Riemer, Izabela Makałowska, Scott Schwartz, Webb Miller, Ross C. Hardison	2003	37
11	Distinguishing Regulatory DNA From Neutral Sites Genome Research ·Laura Elnitski, Ross C. Hardison, Jia Li, Shan Yang, Diana L. Kolbe, Pallavi Eswara, Michael J. O’Connor, Scott Schwartz, Webb Miller, Francesca Chiaromonte	2003	107
12	Covariation in Frequencies of Substitution, Deletion, Transposition, and Recombination During Eutherian Evolution Genome Research ·Ross C. Hardison, Krishna M. Roskin, Shan Yang, Mark Diekhans, W. James Kent, Ryan Weber, Laura Elnitski, Jia Li, Michael J. O’Connor, Diana L. Kolbe, Scott Schwartz, Terrence S. Furey, Simon Whelan, Nick Goldman, Arian F. A. Smit, Webb Miller, Francesca Chiaromonte, David Haussler	2003	241
13	Generation and Comparative Analysis of ∼3.3 Mb of Mouse Genomic Sequence Orthologous to the Region of Human Chromosome 7q11.23 Implicated in Williams Syndrome Genome Research ·Udaya DeSilva, Laura Elnitski, Jacquelyn R. Idol, Ron Chicone, Weiniu Gan, James W. Thomas, Scott Schwartz, Nicole Dietrich, Stephen M. Beckstrom‐Sternberg, Jennifer C. McDowell, Robert W. Blakesley, Gerard G. Bouffard, Pamela J. Thomas, Jeffrey W. Touchman, Webb Miller, Eric D. Green	2002	60
14	Human–Mouse Alignments with BLASTZ Genome Research ·Scott Schwartz, W. James Kent, Arian F. A. Smit, Zheng Zhang, Robert Baertsch, Ross C. Hardison, David Haussler, Webb Miller Hit paper breakdown →	2002	930
15	PipTools: A Computational Toolkit to Annotate and Analyze Pairwise Comparisons of Genomic Sequences Genomics ·Laura Elnitski, Cathy Riemer, Hanna M. Petrykowska, Liliana Florea, Scott Schwartz, Webb Miller, Ross C. Hardison	2002	32
16	A Greedy Algorithm for Aligning DNA Sequences Journal of Computational Biology ·Zheng Zhang, Scott Schwartz, Lukas Wagner, Webb Miller Hit paper breakdown →	2000	4106
17	Globin Gene Server: A Prototype E-Mail Database Server Featuring Extensive Multiple Alignments and Data Compilation for Electronic Genetic Analysis Genomics ·Ross C. Hardison, Kun‐Mao Chao, Scott Schwartz, Shirley Plucinski, Michael Ganetsky, Webb Miller	1994	27
18	Parallelization of a local similarity algorithm Computer applications in the biosciences ·Xiaoqiu Huang, Webb Miller, Scott Schwartz, Ross C. Hardison	1992	24
19	Software tools for analyzing pairwise alignments of long sequences Nucleic Acids Research ·Scott Schwartz, Webb Miller, Chih-Hsiang Yang, Ross C. Hardison	1991	29
20	Sequence and comparative analysis of the rabbit α-like globin gene cluster reveals a rapid mode of evolution in a G + C-rich region of mammalian genomes Journal of Molecular Biology ·Ross C. Hardison, Dan E. Krane, David J. Vandenbergh, Jan‐Fang Cheng, James Mansberger, Miseon Park, Scott Schwartz, Xiaoqiu Huang, Webb Miller	1991	27

About Scott Schwartz

Scott Schwartz is a scholar working on Molecular Biology, Statistics and Probability, Plant Science, Agronomy and Crop Science and Developmental Neuroscience, having authored 36 papers that have together received 8.4k indexed citations. Recurring topics across this work include RNA and protein synthesis mechanisms (17 papers), Genomics and Phylogenetic Studies (15 papers), Chromosomal and Genetic Variations (7 papers), Machine Learning in Bioinformatics (5 papers), Genomics and Chromatin Dynamics (4 papers), Bioenergy crop production and management (3 papers), Algorithms and Data Compression (3 papers) and Statistical Methods and Bayesian Inference (2 papers). The work is most often cited by research in Molecular Biology (5.0k citations), Genetics (1.8k citations), Plant Science (2.2k citations), Ecology (1.1k citations) and Endocrinology (181 citations). Scott Schwartz has collaborated with scholars based in United States, Russia and Australia. Frequent co-authors include Webb Miller, Zheng Zhang, Lukas Wagner, Ross C. Hardison, Arian F. A. Smit, David Haussler, W. James Kent, Cathy Riemer, Zheng Zhang and Richard A. Gibbs. Their work appears in journals such as Genome Research, Genomics, Genome biology, Nucleic Acids Research and Statistics in Medicine.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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