John P. Dekker

5.9k total citations · 2 hit papers
85 papers, 3.5k citations indexed

About

John P. Dekker is a scholar working on Molecular Medicine, Molecular Biology and Epidemiology. According to data from OpenAlex, John P. Dekker has authored 85 papers receiving a total of 3.5k indexed citations (citations by other indexed papers that have themselves been cited), including 35 papers in Molecular Medicine, 26 papers in Molecular Biology and 24 papers in Epidemiology. Recurrent topics in John P. Dekker's work include Antibiotic Resistance in Bacteria (35 papers), Bacterial Identification and Susceptibility Testing (23 papers) and Genomics and Phylogenetic Studies (16 papers). John P. Dekker is often cited by papers focused on Antibiotic Resistance in Bacteria (35 papers), Bacterial Identification and Susceptibility Testing (23 papers) and Genomics and Phylogenetic Studies (16 papers). John P. Dekker collaborates with scholars based in United States, France and Brazil. John P. Dekker's co-authors include Karen M. Frank, Gary Yellen, Anna F. Lau, Sameer S. Kadri, Robert L. Danner, Chanu Rhee, Michael Klompas, Tara N. Palmore, Susu He and Fred Dyda and has published in prestigious journals such as Nature, New England Journal of Medicine and Nature Communications.

In The Last Decade

John P. Dekker

81 papers receiving 3.4k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Difficult-to-Treat Resistance in Gram-negative Bacteremia at 173 US Hospitals: Retrospective Cohort Analysis of Prevalence, Predictors, and Outcome of Resistance to All First-line Agents

2018 377 citations Sameer S. Kadri, Jennifer Adjemian et al. Clinical Infectious Diseases profile →
Prevalence of Antibiotic-Resistant Pathogens in Culture-Proven Sepsis and Outcomes Associated With Inadequate and Broad-Spectrum Empiric Antibiotic Use

2020 232 citations Chanu Rhee, Sameer S. Kadri et al. JAMA Network Open profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
John P. Dekker United States	31	1.5k	980	795	712	594	85	3.5k
Sören Gatermann Germany	37	1.4k 0.9×	1.1k 1.1×	942 1.2×	955 1.3×	708 1.2×	162	4.1k
Tetsuya Yagi Japan	31	1.8k 1.2×	1.0k 1.1×	1.1k 1.4×	252 0.4×	848 1.4×	132	3.5k
Niels Frimodt‐Møller Denmark	38	1.4k 0.9×	1.6k 1.6×	1.4k 1.7×	498 0.7×	743 1.3×	142	4.8k
Teruo Kirikae Japan	32	1.3k 0.9×	1.3k 1.3×	653 0.8×	339 0.5×	724 1.2×	117	3.9k
Costi D. Sifri United States	39	1.0k 0.7×	1.9k 1.9×	992 1.2×	481 0.7×	785 1.3×	118	5.3k
Roberta Fontana Italy	34	1.6k 1.1×	1.2k 1.2×	1.0k 1.3×	776 1.1×	695 1.2×	117	4.1k
Nourkhoda Sadeghifard Iran	28	962 0.6×	856 0.9×	474 0.6×	205 0.3×	549 0.9×	171	2.6k
Anne‐Catrin Uhlemann United States	49	1.2k 0.8×	2.2k 2.3×	1.1k 1.3×	715 1.0×	404 0.7×	163	7.5k
Keigo Shibayama Japan	39	3.0k 2.0×	1.5k 1.5×	1.8k 2.3×	399 0.6×	1.5k 2.5×	228	6.1k
Juan Carlos Galán Spain	30	1.6k 1.0×	979 1.0×	874 1.1×	167 0.2×	714 1.2×	120	3.9k

Countries citing papers authored by John P. Dekker

Since Specialization

Citations

This map shows the geographic impact of John P. Dekker's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by John P. Dekker with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites John P. Dekker more than expected).

Fields of papers citing papers by John P. Dekker

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by John P. Dekker. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by John P. Dekker. The network helps show where John P. Dekker may publish in the future.

Co-authorship network of co-authors of John P. Dekker

This figure shows the co-authorship network connecting the top 25 collaborators of John P. Dekker. A scholar is included among the top collaborators of John P. Dekker based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with John P. Dekker. John P. Dekker is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Ghosh, Soma, L Hall, Bryan Hansen, et al.. (2025). Transcriptional diversification in a human-adapting zoonotic pathogen drives niche-specific evolution. Nature Communications. 16(1). 2067–2067.

Vereecke, Nick, et al.. (2025). An open-source nanopore-only sequencing workflow for analysis of clonal outbreaks delivers short-read level accuracy. Journal of Clinical Microbiology. 63(8). e0066425–e0066425. 2 indexed citations

Cissé, Ousmane H., H. Diego Folco, Yueqin Liu, et al.. (2024). Regional centromere configuration in the fungal pathogens of the Pneumocystis genus. mBio. 15(3). e0318523–e0318523. 1 indexed citations

Conlan, Sean, Poorani Subramanian, Jung-Ho Youn, et al.. (2024). Whole-genome sequence of Mucor velutinosus NIH1002, a strain associated with disseminated disease. Microbiology Resource Announcements. 13(7). e0006224–e0006224.

Dekker, John P., et al.. (2024). Efflux pump-mediated resistance to new beta lactam antibiotics in multidrug-resistant gram-negative bacteria. SHILAP Revista de lepidopterología. 4(1). 170–170. 22 indexed citations

Putnam, Nicole E., Jung-Ho Youn, Meghan A. Wallace, et al.. (2023). Comparative Evaluation of Current Biochemical-, Sequencing-, and Proteomic-Based Identification Methods for the Streptococcus bovis Group. Journal of Clinical Microbiology. 61(4). e0171222–e0171222. 5 indexed citations

Patil, Prashant P., Lidia Beka, Jung-Ho Youn, et al.. (2022). Hypermutator strains of Pseudomonas aeruginosa reveal novel pathways of resistance to combinations of cephalosporin antibiotics and beta-lactamase inhibitors. PLoS Biology. 20(11). e3001878–e3001878. 11 indexed citations

Srivastava, Kshitij, Pavel P. Khil, Emília Sippert, et al.. (2020). ACKR1 Alleles at 5.6 kb in a Well-Characterized Renewable US Food and Drug Administration (FDA) Reference Panel for Standardization of Blood Group Genotyping. Journal of Molecular Diagnostics. 22(10). 1272–1279. 7 indexed citations

Rhee, Chanu, Sameer S. Kadri, John P. Dekker, et al.. (2020). Prevalence of Antibiotic-Resistant Pathogens in Culture-Proven Sepsis and Outcomes Associated With Inadequate and Broad-Spectrum Empiric Antibiotic Use. JAMA Network Open. 3(4). e202899–e202899. 232 indexed citations breakdown →

10.

Babiker, Ahmed, Xiaobai Li, Yi Ling Lai, et al.. (2020). Effectiveness of adjunctive clindamycin in β-lactam antibiotic-treated patients with invasive β-haemolytic streptococcal infections in US hospitals: a retrospective multicentre cohort study. The Lancet Infectious Diseases. 21(5). 697–710. 55 indexed citations

11.

Conlan, Sean, Anna F. Lau, Clay Deming, et al.. (2019). Plasmid Dissemination and Selection of a Multidrug-Resistant Klebsiella pneumoniae Strain during Transplant-Associated Antibiotic Therapy. mBio. 10(5). 14 indexed citations

12.

Cissé, Ousmane H., Liang Ma, Da Wei Huang, et al.. (2018). Comparative Population Genomics Analysis of the Mammalian Fungal Pathogen Pneumocystis. mBio. 9(3). 22 indexed citations

13.

Weingarten, Rebecca A., Ryan C. Johnson, Sean Conlan, et al.. (2018). Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of Bacterial Plasmids Conferring Carbapenem Resistance. mBio. 9(1). 141 indexed citations

14.

Johnson, Ryan C., Clay Deming, Sean Conlan, et al.. (2018). Investigation of a Cluster of Sphingomonas koreensis Infections. New England Journal of Medicine. 379(26). 2529–2539. 41 indexed citations

15.

Strich, Jeffrey R., Emily Ricotta, Yi Ling Lai, et al.. (2018). 2398. Utilization Practices of Ceftazidime–Avibactam at Academic Medical Centers in the United States. Open Forum Infectious Diseases. 5(suppl_1). S715–S716. 1 indexed citations

16.

Esteve‐Solé, Ana, Àngela Deyà‐Martínez, Alexandra F. Freeman, et al.. (2018). Severe BCG-osis Misdiagnosed as Multidrug-Resistant Tuberculosis in an IL-12Rβ1-Deficient Peruvian Girl. Journal of Clinical Immunology. 38(6). 712–716. 6 indexed citations

17.

Decker, Brooke K., Anna F. Lau, John P. Dekker, et al.. (2017). Healthcare personnel intestinal colonization with multidrug-resistant organisms. Clinical Microbiology and Infection. 24(1). 82.e1–82.e4. 21 indexed citations

18.

Dekker, John P., et al.. (2012). Promising New Assays and Technologies for the Diagnosis and Management of Infectious Diseases. Clinical Infectious Diseases. 56(7). 996–1002. 51 indexed citations

19.

Dekker, John P. & Gary Yellen. (2006). Cooperative Gating between Single HCN Pacemaker Channels. The Journal of General Physiology. 128(5). 561–567. 40 indexed citations

20.

Camino, Donato del, et al.. (2004). Intracellular gate opening in Shaker K+ channels defined by high-affinity metal bridges. Nature. 428(6985). 864–868. 175 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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