John H. Maddocks

6.1k total citations · 2 hit papers
86 papers, 4.2k citations indexed

About

John H. Maddocks is a scholar working on Molecular Biology, Biomedical Engineering and Control and Systems Engineering. According to data from OpenAlex, John H. Maddocks has authored 86 papers receiving a total of 4.2k indexed citations (citations by other indexed papers that have themselves been cited), including 34 papers in Molecular Biology, 15 papers in Biomedical Engineering and 10 papers in Control and Systems Engineering. Recurrent topics in John H. Maddocks's work include DNA and Nucleic Acid Chemistry (29 papers), RNA and protein synthesis mechanisms (19 papers) and Protein Structure and Dynamics (13 papers). John H. Maddocks is often cited by papers focused on DNA and Nucleic Acid Chemistry (29 papers), RNA and protein synthesis mechanisms (19 papers) and Protein Structure and Dynamics (13 papers). John H. Maddocks collaborates with scholars based in United States, Switzerland and France. John H. Maddocks's co-authors include Richard Lavery, K. Zakrzewska, Daiva Petkevičiūtė-Gerlach, O. A. González, Maher Moakher, Filip Lankaš, J. C. Alexander, Robert S. Manning, Marco Pasi and Roman Osman and has published in prestigious journals such as Nature, Proceedings of the National Academy of Sciences and Physical Review Letters.

In The Last Decade

John H. Maddocks

81 papers receiving 4.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Conformational analysis of nucleic acids revisited: Curves+

2009 621 citations Richard Lavery, Maher Moakher et al. Nucleic Acids Research profile →
Ethics in Patient Preferences for Artificial Intelligence–Drafted Responses to Electronic Messages

2025 12 citations Benjamin A. Goldstein, Vardit Ravitsky et al. JAMA Network Open profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
John H. Maddocks United States	35	2.4k	642	559	471	378	86	4.2k
Robert Schreiber United States	44	2.5k 1.0×	2.2k 3.4×	249 0.4×	189 0.4×	790 2.1×	123	10.1k
Tamar Schlick United States	54	7.4k 3.0×	617 1.0×	466 0.8×	108 0.2×	1.1k 3.0×	252	9.5k
John E. Stone United States	32	1.8k 0.7×	463 0.7×	108 0.2×	88 0.2×	522 1.4×	64	6.4k
Ali Rana Atılgan Türkiye	27	4.4k 1.8×	171 0.3×	192 0.3×	209 0.4×	661 1.7×	91	5.9k
Maher Moakher Tunisia	21	738 0.3×	242 0.4×	146 0.3×	116 0.2×	78 0.2×	48	2.7k
Andrey G. Cherstvy Germany	44	2.2k 0.9×	1.1k 1.8×	158 0.3×	56 0.1×	540 1.4×	103	5.8k
Bjarne Andresen Denmark	33	362 0.1×	587 0.9×	628 1.1×	392 0.8×	617 1.6×	114	4.9k
Qi Ouyang China	36	2.9k 1.2×	1.5k 2.4×	66 0.1×	45 0.1×	130 0.3×	213	5.5k
Ivo F. Sbalzarini Germany	32	1.6k 0.6×	604 0.9×	130 0.2×	25 0.1×	310 0.8×	125	4.1k
Wilma K. Olson United States	51	9.0k 3.7×	553 0.9×	1.3k 2.4×	50 0.1×	755 2.0×	187	10.1k

Countries citing papers authored by John H. Maddocks

Since Specialization

Citations

This map shows the geographic impact of John H. Maddocks's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by John H. Maddocks with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites John H. Maddocks more than expected).

Fields of papers citing papers by John H. Maddocks

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by John H. Maddocks. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by John H. Maddocks. The network helps show where John H. Maddocks may publish in the future.

Co-authorship network of co-authors of John H. Maddocks

This figure shows the co-authorship network connecting the top 25 collaborators of John H. Maddocks. A scholar is included among the top collaborators of John H. Maddocks based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with John H. Maddocks. John H. Maddocks is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Goldstein, Benjamin A., Vardit Ravitsky, Jean‐Christophe Bélisle‐Pipon, et al.. (2025). Ethics in Patient Preferences for Artificial Intelligence–Drafted Responses to Electronic Messages. JAMA Network Open. 8(3). e250449–e250449. 12 indexed citations breakdown →

Olson, Wilma K., John H. Maddocks, Pablo D. Dans, et al.. (2023). An open call for contributions to a special issue of Biophysical Reviews focused on multiscale simulations of DNA from electrons to nucleosomes. Biophysical Reviews. 15(6). 1901–1902. 1 indexed citations

Maddocks, John H., et al.. (2020). Do values and principles make a difference in times of crisis?. 53(2). 31–35.

Dans, Pablo D., Alexandra Balaceanu, Marco Pasi, et al.. (2019). The static and dynamic structural heterogeneities of B-DNA: extending Calladine–Dickerson rules. Nucleic Acids Research. 47(21). 11090–11102. 38 indexed citations

Pasi, Marco, John H. Maddocks, David L. Beveridge, et al.. (2014). μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA. Nucleic Acids Research. 42(19). 12272–12283. 166 indexed citations

González, O. A., Daiva Petkevičiūtė-Gerlach, & John H. Maddocks. (2013). A sequence-dependent rigid-base model of DNA. The Journal of Chemical Physics. 138(5). 55102–55102. 54 indexed citations

Goriely, Alain, et al.. (2013). Twist and Stretch of Helices Explained via the Kirchhoff-Love Rod Model of Elastic Filaments. Physical Review Letters. 111(10). 108103–108103. 20 indexed citations

Mitchell, Jonathan S., John H. Maddocks, & Robert S. Manning. (2012). Modeling the Sequence Dependent Rigidity of DNA with a Molecular Dynamics Parameterized Rigid Base Model. Biophysical Journal. 102(3). 170a–170a. 1 indexed citations

Maddocks, John H., et al.. (2010). Looping probabilities of elastic chains: A path integral approach. Physical Review E. 82(5). 51924–51924. 7 indexed citations

10.

Lankaš, Filip, et al.. (2009). On the parameterization of rigid base and basepair models of DNA from molecular dynamics simulations. Physical Chemistry Chemical Physics. 11(45). 10565–10565. 65 indexed citations

11.

Demurtas, Davide, Arnaud Amzallag, Eric J. Rawdon, et al.. (2009). Bending modes of DNA directly addressed by cryo-electron microscopy of DNA minicircles. Nucleic Acids Research. 37(9). 2882–2893. 42 indexed citations

12.

Lavery, Richard, Maher Moakher, John H. Maddocks, Daiva Petkevičiūtė-Gerlach, & K. Zakrzewska. (2009). Conformational analysis of nucleic acids revisited: Curves+. Nucleic Acids Research. 37(17). 5917–5929. 621 indexed citations breakdown →

13.

Lankaš, Filip, Richard Lavery, & John H. Maddocks. (2006). Kinking Occurs during Molecular Dynamics Simulations of Small DNA Minicircles. Structure. 14(10). 1527–1534. 141 indexed citations

14.

Jacob, Mathews, Thierry Blu, Cédric Vaillant, John H. Maddocks, & Michaël Unser. (2005). 3-D shape estimation of DNA molecules from stereo cryo-electron micro-graphs using a projection-steerable snake. IEEE Transactions on Image Processing. 15(1). 214–227. 12 indexed citations

15.

Dixit, Surjit B., David L. Beveridge, Thomas E. Cheatham, et al.. (2005). Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. II: Sequence Context Effects on the Dynamical Structures of the 10 Unique Dinucleotide Steps. Biophysical Journal. 89(6). 3721–3740. 197 indexed citations

16.

Hoffman, Kathleen, Robert S. Manning, & John H. Maddocks. (2003). Link, twist, energy, and the stability of DNA minicircles. Biopolymers. 70(2). 145–157. 24 indexed citations

17.

Furrer, Patrick, Robert S. Manning, & John H. Maddocks. (2000). DNA Rings with Multiple Energy Minima. Biophysical Journal. 79(1). 116–136. 34 indexed citations

18.

Wang, Li‐Sheng, John H. Maddocks, & P. S. Krishnaprasad. (1991). Steady rigid-body motions in a central gravitational field. The Journal of the Astronautical Sciences. 40. 449. 34 indexed citations

19.

Maddocks, John H.. (1988). Restricted quadratic forms, inertia theorems, and the Schur complement. Linear Algebra and its Applications. 108. 1–36. 21 indexed citations

20.

Maddocks, John H.. (1981). Bizarre realities: An interview with Peter Carey. Southerly. 41(1). 27.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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