David L. Beveridge

9.6k total citations · 2 hit papers
82 papers, 6.7k citations indexed

About

David L. Beveridge is a scholar working on Molecular Biology, Atomic and Molecular Physics, and Optics and Materials Chemistry. According to data from OpenAlex, David L. Beveridge has authored 82 papers receiving a total of 6.7k indexed citations (citations by other indexed papers that have themselves been cited), including 46 papers in Molecular Biology, 16 papers in Atomic and Molecular Physics, and Optics and 16 papers in Materials Chemistry. Recurrent topics in David L. Beveridge's work include Protein Structure and Dynamics (27 papers), RNA and protein synthesis mechanisms (22 papers) and DNA and Nucleic Acid Chemistry (13 papers). David L. Beveridge is often cited by papers focused on Protein Structure and Dynamics (27 papers), RNA and protein synthesis mechanisms (22 papers) and DNA and Nucleic Acid Chemistry (13 papers). David L. Beveridge collaborates with scholars based in United States, India and Germany. David L. Beveridge's co-authors include John A. Pople, Frank M. DiCapua, Mihaly Mezei, S. Swaminathan, B. Jayaram, William E. Harte, Prem K. Mehrotra, Anne M. Baranger, S. W. Harrison and S. Swaminathan and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and The Journal of Chemical Physics.

In The Last Decade

David L. Beveridge

81 papers receiving 6.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Approximate molecular orbital theory

1970 2.7k citations David L. Beveridge et al. profile →
Free Energy Via Molecular Simulation: Applications to Chemical and Biomolecular Systems

1989 909 citations David L. Beveridge et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
David L. Beveridge United States	35	2.8k	2.3k	1.4k	1.3k	1.2k	82	6.7k
Caterina Ghio Italy	30	3.2k 1.1×	1.6k 0.7×	1.1k 0.8×	1.5k 1.2×	1.1k 0.9×	111	6.2k
U. Chandra Singh United States	28	5.6k 2.0×	2.8k 1.2×	2.1k 1.5×	1.9k 1.5×	1.5k 1.3×	65	10.3k
Andriy Kovalenko Canada	44	2.9k 1.0×	2.8k 1.2×	1.9k 1.4×	1.0k 0.8×	1.1k 0.9×	185	7.0k
Iñaki Tuñón Spain	45	3.4k 1.2×	1.7k 0.8×	1.5k 1.1×	1.5k 1.1×	912 0.8×	221	6.5k
Bertil Halle Sweden	54	4.4k 1.6×	3.2k 1.4×	2.2k 1.6×	898 0.7×	1.1k 0.9×	160	9.1k
Paul K. Weiner United States	18	4.4k 1.6×	1.3k 0.6×	1.5k 1.1×	1.1k 0.8×	742 0.6×	39	7.1k
Philip W. Fowler United Kingdom	42	1.4k 0.5×	2.3k 1.0×	1.5k 1.1×	1.6k 1.2×	781 0.6×	141	5.8k
Estanislao Silla Spain	33	1.5k 0.5×	1.5k 0.7×	833 0.6×	1.4k 1.0×	900 0.7×	109	4.2k
Imre G. Csizmadia Canada	42	2.7k 1.0×	2.8k 1.2×	1.1k 0.8×	2.7k 2.1×	1.7k 1.4×	452	8.1k
Scott J. Weiner United States	9	4.8k 1.7×	1.4k 0.6×	1.5k 1.1×	1.2k 0.9×	773 0.6×	10	7.4k

Countries citing papers authored by David L. Beveridge

Since Specialization

Citations

This map shows the geographic impact of David L. Beveridge's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by David L. Beveridge with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites David L. Beveridge more than expected).

Fields of papers citing papers by David L. Beveridge

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by David L. Beveridge. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by David L. Beveridge. The network helps show where David L. Beveridge may publish in the future.

Co-authorship network of co-authors of David L. Beveridge

This figure shows the co-authorship network connecting the top 25 collaborators of David L. Beveridge. A scholar is included among the top collaborators of David L. Beveridge based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with David L. Beveridge. David L. Beveridge is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Jayaraj, Abhilash, Kelly M. Thayer, David L. Beveridge, & Manju Hingorani. (2023). Molecular dynamics of mismatch detection—How MutS uses indirect readout to find errors in DNA. Biophysical Journal. 122(15). 3031–3043. 4 indexed citations

Beveridge, David L., et al.. (2023). Allosteric Signaling in PDZ Energetic Networks: Embedding Error Analysis. The Journal of Physical Chemistry B. 127(3). 623–633.

Dang, Na Le, Anne M. Baranger, & David L. Beveridge. (2022). High Energy Channeling and Malleable Transition States: Molecular Dynamics Simulations and Free Energy Landscapes for the Thermal Unfolding of Protein U1A and 13 Mutants. Biomolecules. 12(7). 940–940. 2 indexed citations

Jasuja, Ravi, Abhilash Jayaraj, Liming Peng, et al.. (2021). Estradiol induces allosteric coupling and partitioning of sex-hormone-binding globulin monomers among conformational states. iScience. 24(6). 102414–102414. 12 indexed citations

Li, Yan, et al.. (2019). Msh4-Msh5 Induced DNA Conformational Changes Provide Insights into Its Role in Meiotic Recombination. Biophysical Journal. 116(3). 21a–21a. 1 indexed citations

Mishra, Akhilesh, Priyanka Siwach, B. Jayaram, et al.. (2018). Toward a Universal Structural and Energetic Model for Prokaryotic Promoters. Biophysical Journal. 115(7). 1180–1189. 8 indexed citations

Thayer, Kelly M., et al.. (2017). Evolutionary Covariance Combined with Molecular Dynamics Predicts a Framework for Allostery in the MutS DNA Mismatch Repair Protein. The Journal of Physical Chemistry B. 121(9). 2049–2061. 16 indexed citations

Thayer, Kelly M., et al.. (2017). Molecular Dynamics–Markov State Model of Protein Ligand Binding and Allostery in CRIB-PDZ: Conformational Selection and Induced Fit. The Journal of Physical Chemistry B. 121(22). 5509–5514. 35 indexed citations

Khandelwal, Garima, Rebecca A. Lee, B. Jayaram, & David L. Beveridge. (2014). A Statistical Thermodynamic Model for Investigating the Stability of DNA Sequences from Oligonucleotides to Genomes. Biophysical Journal. 106(11). 2465–2473. 12 indexed citations

10.

Dierker, Lisa, et al.. (2012). Strength in Numbers: A Multidisciplinary, Project-based Course in Introductory Statistics. 12(2). 4–14. 13 indexed citations

11.

Pieniazek, Susan N., Manju Hingorani, & David L. Beveridge. (2011). Dynamical Allosterism in the Mechanism of Action of DNA Mismatch Repair Protein MutS. Biophysical Journal. 101(7). 1730–1739. 18 indexed citations

12.

Singhal, Poonam, B. Jayaram, Surjit B. Dixit, & David L. Beveridge. (2008). Prokaryotic Gene Finding Based on Physicochemical Characteristics of Codons Calculated from Molecular Dynamics Simulations. Biophysical Journal. 94(11). 4173–4183. 32 indexed citations

13.

Zhong, Weimin, Surjit B. Dixit, Robert J. Mallis, et al.. (2007). CTL Recognition of a Protective Immunodominant Influenza A Virus Nucleoprotein Epitope Utilizes a Highly Restricted Vβ but Diverse Vα Repertoire: Functional and Structural Implications. Journal of Molecular Biology. 372(2). 535–548. 23 indexed citations

14.

Kormos, Bethany L., Anne M. Baranger, & David L. Beveridge. (2006). A study of collective atomic fluctuations and cooperativity in the U1A–RNA complex based on molecular dynamics simulations. Journal of Structural Biology. 157(3). 500–513. 40 indexed citations

15.

Zhao, Ying, Bethany L. Kormos, David L. Beveridge, & Anne M. Baranger. (2005). Molecular dynamics simulation studies of a protein–RNA complex with a selectively modified binding interface. Biopolymers. 81(4). 256–269. 15 indexed citations

16.

Kombo, David C., Matthew A. Young, & David L. Beveridge. (2000). One nanosecond molecular dynamics simulation of the N-terminal domain of the λ repressor protein. Biopolymers. 53(7). 596–605. 9 indexed citations

17.

Jayaram, B. & David L. Beveridge. (1996). Modeling DNA in Aqueous Solutions: Theoretical and Computer Simulation Studies on the Ion Atmosphere of DNA. Annual Review of Biophysics and Biomolecular Structure. 25(1). 367–394. 103 indexed citations

18.

Ptaszek, Leon M., S. Vijayakumar, G. Ravishanker, & David L. Beveridge. (1994). Molecular dynamics studies of the human CD4 protein. Biopolymers. 34(9). 1145–1153. 9 indexed citations

19.

Harte, William E. & David L. Beveridge. (1994). [11] Probing structure-function relationships in human immunodeficiency virus type 1 protease via molecular dynamics simulation. Methods in enzymology on CD-ROM/Methods in enzymology. 241. 178–195. 2 indexed citations

20.

Swaminathan, S., et al.. (1990). Conformational and helicoidal analysis of the molecular dynamics of proteins: “Curves,” dials and windows for a 50 psec dynamic trajectory of BPTI. Proteins Structure Function and Bioinformatics. 8(2). 179–193. 22 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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