Marco Pasi

1.5k total citations
22 papers, 1.1k citations indexed

About

Marco Pasi is a scholar working on Molecular Biology, Materials Chemistry and Infectious Diseases. According to data from OpenAlex, Marco Pasi has authored 22 papers receiving a total of 1.1k indexed citations (citations by other indexed papers that have themselves been cited), including 20 papers in Molecular Biology, 6 papers in Materials Chemistry and 3 papers in Infectious Diseases. Recurrent topics in Marco Pasi's work include DNA and Nucleic Acid Chemistry (11 papers), Protein Structure and Dynamics (10 papers) and RNA and protein synthesis mechanisms (8 papers). Marco Pasi is often cited by papers focused on DNA and Nucleic Acid Chemistry (11 papers), Protein Structure and Dynamics (10 papers) and RNA and protein synthesis mechanisms (8 papers). Marco Pasi collaborates with scholars based in France, Switzerland and Italy. Marco Pasi's co-authors include Richard Lavery, K. Zakrzewska, John H. Maddocks, Christophe Blanchet, Elena Papaleo, Matteo Tiberti, Daiva Petkevičiūtė-Gerlach, Luca De Gioia, Alberto Pérez and Pablo D. Dans and has published in prestigious journals such as Nucleic Acids Research, PLoS ONE and The Journal of Physical Chemistry B.

In The Last Decade

Marco Pasi

22 papers receiving 1.1k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Marco Pasi France 17 981 164 159 82 68 22 1.1k
Jürgen Walther Spain 7 1.0k 1.1× 103 0.6× 145 0.9× 56 0.7× 68 1.0× 7 1.1k
Petra Kührová Czechia 19 1.1k 1.1× 109 0.7× 141 0.9× 54 0.7× 52 0.8× 34 1.2k
Iván Ivani Spain 9 1.2k 1.2× 116 0.7× 131 0.8× 57 0.7× 82 1.2× 10 1.3k
Alexandra Balaceanu Spain 9 912 0.9× 95 0.6× 130 0.8× 50 0.6× 62 0.9× 9 1.1k
Miroslav Krepl Czechia 22 1.7k 1.7× 107 0.7× 204 1.3× 86 1.0× 52 0.8× 55 1.8k
Simon Rüdisser Switzerland 17 850 0.9× 100 0.6× 81 0.5× 47 0.6× 37 0.5× 30 1.0k
Igor Dodevski United States 8 727 0.7× 103 0.6× 90 0.6× 78 1.0× 57 0.8× 9 870
Clifford R. Robinson United States 18 797 0.8× 175 1.1× 59 0.4× 88 1.1× 48 0.7× 19 941
Thang Kien Chiu United States 13 1.3k 1.3× 293 1.8× 83 0.5× 104 1.3× 60 0.9× 17 1.4k
Samuela Pasquali France 16 814 0.8× 165 1.0× 79 0.5× 26 0.3× 42 0.6× 40 937

Countries citing papers authored by Marco Pasi

Since Specialization
Citations

This map shows the geographic impact of Marco Pasi's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Marco Pasi with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Marco Pasi more than expected).

Fields of papers citing papers by Marco Pasi

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Marco Pasi. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Marco Pasi. The network helps show where Marco Pasi may publish in the future.

Co-authorship network of co-authors of Marco Pasi

This figure shows the co-authorship network connecting the top 25 collaborators of Marco Pasi. A scholar is included among the top collaborators of Marco Pasi based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Marco Pasi. Marco Pasi is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Zargarian, Loussiné, Marjorie Catala, Marco Pasi, et al.. (2022). Investigation of the Low-Populated Excited States of the HIV-1 Nucleocapsid Domain. Viruses. 14(3). 632–632. 1 indexed citations
2.
Pasi, Marco, Marjorie Catala, Loussiné Zargarian, et al.. (2020). Overview of the Nucleic-Acid Binding Properties of the HIV-1 Nucleocapsid Protein in Its Different Maturation States. Viruses. 12(10). 1109–1109. 16 indexed citations
3.
Dans, Pablo D., Alexandra Balaceanu, Marco Pasi, et al.. (2019). The static and dynamic structural heterogeneities of B-DNA: extending Calladine–Dickerson rules. Nucleic Acids Research. 47(21). 11090–11102. 38 indexed citations
4.
Sagendorf, Jared, et al.. (2017). Expanding the repertoire of DNA shape features for genome-scale studies of transcription factor binding. Nucleic Acids Research. 45(22). 12877–12887. 73 indexed citations
5.
Pasi, Marco, K. Zakrzewska, John H. Maddocks, & Richard Lavery. (2017). Analyzing DNA curvature and its impact on the ionic environment: application to molecular dynamics simulations of minicircles. Nucleic Acids Research. 45(7). 4269–4277. 17 indexed citations
6.
Balaceanu, Alexandra, Marco Pasi, Pablo D. Dans, et al.. (2016). The Role of Unconventional Hydrogen Bonds in Determining BII Propensities in B-DNA. The Journal of Physical Chemistry Letters. 8(1). 21–28. 20 indexed citations
7.
Pasi, Marco, Damien Mornico, Stevenn Volant, et al.. (2016). DNA minicircles clarify the specific role of DNA structure on retroviral integration. Nucleic Acids Research. 44(16). 7830–7847. 18 indexed citations
8.
Pasi, Marco, Dimitar Angelov, Jan Bednář, Stéfan Dimitrov, & Richard Lavery. (2016). Extra views on structure and dynamics of DNA loops on nucleosomes studied with molecular simulations. Nucleus. 7(6). 554–559. 2 indexed citations
9.
Pasi, Marco & Richard Lavery. (2016). Structure and dynamics of DNA loops on nucleosomes studied with atomistic, microsecond-scale molecular dynamics. Nucleic Acids Research. 44(11). 5450–5456. 32 indexed citations
10.
Pasi, Marco, John H. Maddocks, & Richard Lavery. (2015). Analyzing ion distributions around DNA: sequence-dependence of potassium ion distributions from microsecond molecular dynamics. Nucleic Acids Research. 43(4). 2412–2423. 83 indexed citations
11.
Pasi, Marco, John H. Maddocks, David L. Beveridge, et al.. (2014). μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA. Nucleic Acids Research. 42(19). 12272–12283. 166 indexed citations
12.
Petkevičiūtė-Gerlach, Daiva, Marco Pasi, O. A. González, & John H. Maddocks. (2014). cgDNA: a software package for the prediction of sequence-dependent coarse-grain free energies of B-form DNA. Nucleic Acids Research. 42(20). e153–e153. 36 indexed citations
13.
Lavery, Richard, John H. Maddocks, Marco Pasi, & K. Zakrzewska. (2014). Analyzing ion distributions around DNA. Nucleic Acids Research. 42(12). 8138–8149. 85 indexed citations
14.
Pasi, Marco, et al.. (2012). PaLaCe: A Coarse-Grain Protein Model for Studying Mechanical Properties. Journal of Chemical Theory and Computation. 9(1). 785–793. 49 indexed citations
15.
Pasi, Marco, et al.. (2012). A Protein Solvation Model Based on Residue Burial. Journal of Chemical Theory and Computation. 8(6). 2141–2144. 12 indexed citations
16.
Papaleo, Elena, Marco Pasi, Matteo Tiberti, & Luca De Gioia. (2011). Molecular Dynamics of Mesophilic-Like Mutants of a Cold-Adapted Enzyme: Insights into Distal Effects Induced by the Mutations. PLoS ONE. 6(9). e24214–e24214. 33 indexed citations
17.
Blanchet, Christophe, Marco Pasi, K. Zakrzewska, & Richard Lavery. (2011). CURVES+ web server for analyzing and visualizing the helical, backbone and groove parameters of nucleic acid structures. Nucleic Acids Research. 39(suppl). W68–W73. 203 indexed citations
18.
Papaleo, Elena, Matteo Tiberti, Gaetano Invernizzi, Marco Pasi, & Valeria Ranzani. (2011). Molecular Determinants of Enzyme Cold Adaptation: Comparative Structural and Computational Studies of Cold- and Warm-Adapted Enzymes. Current Protein and Peptide Science. 12(7). 657–683. 41 indexed citations
19.
Pasi, Marco, Laura Riccardi, Piercarlo Fantucci, Luca De Gioia, & Elena Papaleo. (2009). Dynamic Properties of a Psychrophilic α-Amylase in Comparison with a Mesophilic Homologue. The Journal of Physical Chemistry B. 113(41). 13585–13595. 25 indexed citations
20.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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