Jeffery S. Cox

23.6k citations

75 papers · 13.2k indexed · 10 hit papers · h-index 50

Molecular Biology top 1%
Infectious Diseases top 0.1%
Epidemiology top 0.2%
Immunology top 0.5%
Cell Biology top 0.2%

Co-authors: Peter Walter Paolo Manzanillo Caroline E. Shamu William R. Jacobs Sarah A. Stanley Robert O. Watson Sridharan Raghavan Michael U. Shiloh
Topics: Tuberculosis Research and Epidemiology (40 papers)Mycobacterium research and diagnosis (22 papers)Antibiotic Resistance in Bacteria (12 papers)
Cited by: Infectious Diseases Molecular Medicine Epidemiology
Journals: Nature Science Cell
Partner nations: United States South Africa Netherlands

In The Last Decade

Jeffery S. Cox

74 papers receiving 13.1k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Transcriptional induction of genes encoding endoplasmic reticulum resident proteins requires a transmembrane protein kinase

1993 989 citations Jeffery S. Cox et al. profile →
A Novel Mechanism for Regulating Activity of a Transcription Factor That Controls the Unfolded Protein Response

1996 806 citations Jeffery S. Cox et al. profile →
The HMG domain of lymphoid enhancer factor 1 bends DNA and facilitates assembly of functional nucleoprotein structures

1992 598 citations Jeffery S. Cox et al. profile →
Extracellular M. tuberculosis DNA Targets Bacteria for Autophagy by Activating the Host DNA-Sensing Pathway

2012 597 citations Robert O. Watson, Paolo Manzanillo et al. profile →
Complex lipid determines tissue-specific replication of Mycobacterium tuberculosis in mice

1999 588 citations Jeffery S. Cox et al. profile →
Type VII secretion — mycobacteria show the way

2007 556 citations Abdallah M. Abdallah, Nicolaas C. Gey van Pittius et al. Nature Reviews Microbiology profile →
A Novel Mycolic Acid Cyclopropane Synthetase Is Required for Cording, Persistence, and Virulence of Mycobacterium tuberculosis

2000 507 citations Jeffery S. Cox et al. profile →
Circadian Gene Bmal1 Regulates Diurnal Oscillations of Ly6C ^hi Inflammatory Monocytes

2013 505 citations Khoa D. Nguyen, Sarah J. Fentress et al. Science profile →
The Cytosolic Sensor cGAS Detects Mycobacterium tuberculosis DNA to Induce Type I Interferons and Activate Autophagy

2015 469 citations Robert O. Watson, Samantha L. Bell et al. Cell Host & Microbe profile →
The ubiquitin ligase parkin mediates resistance to intracellular pathogens

2013 431 citations Paolo Manzanillo, Robert O. Watson et al. profile →

Peers

Countries citing papers authored by Jeffery S. Cox

Since Specialization

Citations

This map shows the geographic impact of Jeffery S. Cox's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Jeffery S. Cox with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Jeffery S. Cox more than expected).

Fields of papers citing papers by Jeffery S. Cox

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Jeffery S. Cox. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Jeffery S. Cox. The network helps show where Jeffery S. Cox may publish in the future.

Co-authorship network of co-authors of Jeffery S. Cox

This figure shows the co-authorship network connecting the top 25 collaborators of Jeffery S. Cox. A scholar is included among the top collaborators of Jeffery S. Cox based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Jeffery S. Cox. Jeffery S. Cox is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	The mevalonate pathway of isoprenoid biosynthesis supports metabolic flexibility in Mycobacterium marinum 2025 ·Journal of Bacteriology ·(unknown),Edward E. K. Baidoo,Emine Akyüz Turumtay,(unknown),Jay D. Keasling,Cressida A. Madigan,Daniel A. Portnoy,Jeffery S. Cox	0
2	Autophagy restricts Mycobacterium tuberculosis during acute infection in mice 2023 ·Nature Microbiology ·Guillaume Golovkine,Allison W. Roberts,(unknown),Rafael Rivera‐Lugo,(unknown),(unknown),(unknown),Teresa Repasy,Michael J. Cronce,Jonathan M. Budzik,Erik Van Dis,Lauren M. Popov,Gabriel Mitchell,(unknown),Danielle M. Jorgens,Jeffery S. Cox	49
3	Deficiency in Galectin-3, -8, and -9 impairs immunity to chronic Mycobacterium tuberculosis infection but not acute infection with multiple intracellular pathogens 2023 ·PLoS Pathogens ·(unknown),J. Carl Craft,Rafael Rivera‐Lugo,(unknown),Guillaume Golovkine,Samantha L. Bell,(unknown),Erik Van Dis,Wandy L. Beatty,Shally R. Margolis,Teresa Repasy,(unknown),Angus Y. Lee,Russell E. Vance,Sarah A. Stanley,Robert O. Watson,Nevan J. Krogan,Daniel A. Portnoy,Bennett H. Penn,Jeffery S. Cox	11
4	IFN-γ-independent control of M. tuberculosis requires CD4 T cell-derived GM-CSF and activation of HIF-1α 2022 ·PLoS Pathogens ·Erik Van Dis,Douglas Fox,(unknown),(unknown),(unknown),(unknown),(unknown),Jeffery S. Cox,Sarah A. Stanley	26
5	Galectin-8 Senses Phagosomal Damage and Recruits Selective Autophagy Adapter TAX1BP1 To Control Mycobacterium tuberculosis Infection in Macrophages 2021 ·mBio ·Samantha L. Bell,(unknown),Jeffery S. Cox,Kristin L. Patrick,Robert O. Watson	58
6	Ribosome Rescue Inhibitors Kill Actively Growing and Nonreplicating Persister Mycobacterium tuberculosis Cells 2017 ·ACS Infectious Diseases ·John N. Alumasa,Paolo Manzanillo,Nicholas Peterson,(unknown),Anthony D. Baughn,Jeffery S. Cox,Kenneth C. Keiler	28
7	A Functional Toll-Interacting Protein Variant Is Associated with Bacillus Calmette-Guérin–Specific Immune Responses and Tuberculosis 2017 ·American Journal of Respiratory and Critical Care Medicine ·Javeed A. Shah,Munyaradzi Musvosvi,Muki Shey,David Horné,Richard D. Wells,Glenna J. Peterson,Jeffery S. Cox,Michelle Daya,Eileen G. Hoal,Lin Lin,Raphaël Gottardo,Willem A. Hanekom,Thomas J. Scriba,Mark Hatherill,Thomas R. Hawn	34
8	The Cytosolic Sensor cGAS Detects Mycobacterium tuberculosis DNA to Induce Type I Interferons and Activate Autophagybreakdown → 2015 ·Cell Host & Microbe ·Robert O. Watson,Samantha L. Bell,Donna A. MacDuff,Jacqueline M. Kimmey,Elie J. Diner,Joanna Olivas,Russell E. Vance,Christina L. Stallings,Herbert W. Virgin,Jeffery S. Cox	469
9	Structure of a new DNA-binding domain which regulates pathogenesis in a wide variety of fungi 2014 ·Proceedings of the National Academy of Sciences ·Matthew B. Lohse,Oren S. Rosenberg,Jeffery S. Cox,Robert M. Stroud,Janet Finer-Moore,Alexander D. Johnson	17
10	Circadian Gene Bmal1 Regulates Diurnal Oscillations of Ly6C ^hi Inflammatory Monocytesbreakdown → 2013 ·Science ·Khoa D. Nguyen,Sarah J. Fentress,Yifu Qiu,Karen Yun,Jeffery S. Cox,Ajay Chawla	505
11	Host–Pathogen Interactions During Mycobacterium tuberculosis infections 2013 ·Current topics in microbiology and immunology ·Sarah A. Stanley,Jeffery S. Cox	82
12	Mycobacterium Tuberculosis Activates the DNA-Dependent Cytosolic Surveillance Pathway within Macrophages 2012 ·Cell Host & Microbe ·Paolo Manzanillo,Michael U. Shiloh,Daniel A. Portnoy,Jeffery S. Cox	347
13	Comprehensive Functional Analysis of Mycobacterium tuberculosis Toxin-Antitoxin Systems: Implications for Pathogenesis, Stress Responses, and Evolution 2009 ·PLoS Genetics ·Holly Ramage,Lynn Connolly,Jeffery S. Cox	392
14	Systematic Genetic Nomenclature for Type VII Secretion Systems 2009 ·PLoS Pathogens ·Wilbert Bitter,Edith N. G. Houben,(unknown),Priscille Brodin,Eric J. Brown,Jeffery S. Cox,Keith M. Derbyshire,Sarah M. Fortune,Lian‐Yong Gao,Jun Liu,Nicolaas C. Gey van Pittius,Alexander S. Pym,Eric J. Rubin,David R. Sherman,Stewart T. Cole,Roland Brosch	258
15	The Type I IFN Response to Infection with Mycobacterium tuberculosis Requires ESX-1-Mediated Secretion and Contributes to Pathogenesis 2007 ·The Journal of Immunology ·Sarah A. Stanley,James E. Johndrow,Paolo Manzanillo,Jeffery S. Cox	324
16	Type VII secretion — mycobacteria show the waybreakdown → 2007 ·Nature Reviews Microbiology ·Abdallah M. Abdallah,Nicolaas C. Gey van Pittius,Patricia A. Champion,Jeffery S. Cox,Joen Luirink,Christina M. J. E. Vandenbroucke‐Grauls,Ben J. Appelmelk,Wilbert Bitter	556
17	Nippostrongylus brasiliensis: Identification of intelectin-1 and -2 as Stat6-dependent genes expressed in lung and intestine during infection 2007 ·Experimental Parasitology ·David Voehringer,Sarah A. Stanley,Jeffery S. Cox,Gladys C. Completo,Todd L. Lowary,Richard M. Locksley	39
18	C-Terminal Signal Sequence Promotes Virulence Factor Secretion in Mycobacterium tuberculosis 2006 ·Science ·Patricia A. Champion,Sarah A. Stanley,Matthew M. Champion,Karen Brown,Jeffery S. Cox	167
19	A non‐RD1 gene cluster is required for Snm secretion in Mycobacterium tuberculosis 2005 ·Molecular Microbiology ·Jason A. MacGurn,Sridharan Raghavan,Sarah A. Stanley,Jeffery S. Cox	150
20	The unfolded protein response coordinates the production of endoplasmic reticulum protein and endoplasmic reticulum membrane. 1997 ·Molecular Biology of the Cell ·Jeffery S. Cox,(unknown),Peter Walter	327

About Jeffery S. Cox

Jeffery S. Cox is a scholar working on Molecular Medicine, Infectious Diseases and Immunology, having authored 75 papers that have together received 13.2k indexed citations. Recurring topics across this work include Tuberculosis Research and Epidemiology (40 papers), Mycobacterium research and diagnosis (22 papers) and Antibiotic Resistance in Bacteria (12 papers). The work is most often cited by research in Infectious Diseases (5.7k citations), Molecular Medicine (1.4k citations) and Epidemiology (5.6k citations). Jeffery S. Cox has collaborated with scholars based in United States, South Africa and Netherlands. Frequent co-authors include Peter Walter, Paolo Manzanillo, Caroline E. Shamu, William R. Jacobs, Sarah A. Stanley, Robert O. Watson, Sridharan Raghavan, Michael U. Shiloh, Rudolf Grosschedl and Klaus Giese. Their work appears in journals such as Nature, Science and Cell.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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