Hanlee P. Ji

18.4k total citations · 2 hit papers
130 papers, 7.6k citations indexed

About

Hanlee P. Ji is a scholar working on Molecular Biology, Cancer Research and Oncology. According to data from OpenAlex, Hanlee P. Ji has authored 130 papers receiving a total of 7.6k indexed citations (citations by other indexed papers that have themselves been cited), including 90 papers in Molecular Biology, 44 papers in Cancer Research and 31 papers in Oncology. Recurrent topics in Hanlee P. Ji's work include Cancer Genomics and Diagnostics (42 papers), Genomics and Phylogenetic Studies (24 papers) and Single-cell and spatial transcriptomics (22 papers). Hanlee P. Ji is often cited by papers focused on Cancer Genomics and Diagnostics (42 papers), Genomics and Phylogenetic Studies (24 papers) and Single-cell and spatial transcriptomics (22 papers). Hanlee P. Ji collaborates with scholars based in United States, Australia and South Korea. Hanlee P. Ji's co-authors include Jay Shendure, Billy T. Lau, Noemi Andor, Carlo C. Maley, Susan M. Grimes, Anuja Sathe, HoJoon Lee, Claudia Petritsch, Trevor A. Graham and Athena Aktipis and has published in prestigious journals such as Proceedings of the National Academy of Sciences, Nucleic Acids Research and Nature Medicine.

In The Last Decade

Hanlee P. Ji

124 papers receiving 7.4k citations

Hit Papers

align trajectories sort by overperformance

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Next-generation DNA sequencing

2008 2.8k citations Hanlee P. Ji et al. Nature Biotechnology profile →
Pan-cancer analysis of the extent and consequences of intratumor heterogeneity

2015 540 citations Noemi Andor, Hanlee P. Ji et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Hanlee P. Ji United States	35	4.8k	1.8k	1.4k	1.1k	663	130	7.6k
Riza M. Daza United States	26	6.6k 1.4×	2.2k 1.2×	1.1k 0.8×	713 0.7×	311 0.5×	35	8.6k
Jeffrey T. Chang United States	38	6.6k 1.4×	1.6k 0.9×	888 0.6×	1.5k 1.4×	415 0.6×	109	9.5k
John D. McPherson United States	52	6.7k 1.4×	1.8k 1.0×	2.2k 1.5×	1.1k 1.0×	372 0.6×	145	11.4k
Kai Ye China	45	5.1k 1.1×	2.4k 1.4×	1.9k 1.3×	1.6k 1.5×	862 1.3×	190	10.8k
Dari Shalon United States	11	10.5k 2.2×	1.3k 0.7×	1.5k 1.0×	1.3k 1.2×	388 0.6×	13	13.6k
Eivind Hovig Norway	46	6.0k 1.2×	2.3k 1.3×	1.1k 0.8×	2.2k 2.1×	568 0.9×	218	8.9k
Jian‐Bing Fan United States	46	6.0k 1.2×	1.9k 1.1×	1.6k 1.1×	708 0.7×	273 0.4×	133	8.7k
Tamar Geiger Israel	43	8.9k 1.9×	1.4k 0.8×	725 0.5×	1.4k 1.3×	226 0.3×	100	12.8k
Sean M. Grimmond Australia	58	8.1k 1.7×	3.0k 1.7×	1.3k 0.9×	1.3k 1.2×	234 0.4×	178	11.0k
Martin Hirst Canada	50	9.0k 1.9×	3.0k 1.7×	1.7k 1.2×	750 0.7×	526 0.8×	136	12.0k

Countries citing papers authored by Hanlee P. Ji

Since Specialization

Citations

This map shows the geographic impact of Hanlee P. Ji's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Hanlee P. Ji with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Hanlee P. Ji more than expected).

Fields of papers citing papers by Hanlee P. Ji

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Hanlee P. Ji. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Hanlee P. Ji. The network helps show where Hanlee P. Ji may publish in the future.

Co-authorship network of co-authors of Hanlee P. Ji

This figure shows the co-authorship network connecting the top 25 collaborators of Hanlee P. Ji. A scholar is included among the top collaborators of Hanlee P. Ji based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Hanlee P. Ji. Hanlee P. Ji is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Shree, Tanaya, Debra K. Czerwinski, Sarah Haebe, et al.. (2025). A Phase I Clinical Trial Adding OX40 Agonism to In Situ Therapeutic Cancer Vaccination in Patients with Low-Grade B-cell Lymphoma Highlights Challenges in Translation from Mouse to Human Studies. Clinical Cancer Research. 31(5). 868–880. 1 indexed citations

Bai, Xiangqi, et al.. (2025). Single-cell aneuploidy and chromosomal arm imbalances define subclones with divergent transcriptomic phenotypes. NAR Genomics and Bioinformatics. 7(4). lqaf138–lqaf138.

Grimes, Susan M., Heon Seok Kim, Sharmili Roy, et al.. (2023). Single-cell multi-gene identification of somatic mutations and gene rearrangements in cancer. NAR Cancer. 5(3). zcad034–zcad034. 3 indexed citations

Kim, Heon Seok, Susan M. Grimes, Tianqi Chen, et al.. (2023). Direct measurement of engineered cancer mutations and their transcriptional phenotypes in single cells. Nature Biotechnology. 42(8). 1254–1262. 15 indexed citations

Lau, Billy T., Shubham Chandak, Sharmili Roy, et al.. (2023). Magnetic DNA random access memory with nanopore readouts and exponentially-scaled combinatorial addressing. Scientific Reports. 13(1). 8514–8514. 13 indexed citations

Wu, Julie, Victoria Y. Ding, Sophia J. Luo, et al.. (2022). Predictive Model to Guide Brain Magnetic Resonance Imaging Surveillance in Patients With Metastatic Lung Cancer: Impact on Real-World Outcomes. JCO Precision Oncology. 6(6). e2200220–e2200220. 4 indexed citations

Sathe, Anuja, Susan M. Grimes, Zilu Zhou, et al.. (2022). Colorectal Cancer Metastases in the Liver Establish Immunosuppressive Spatial Networking between Tumor-Associated SPP1 + Macrophages and Fibroblasts. Clinical Cancer Research. 29(1). 244–260. 104 indexed citations

Zhao, Lan, Susan M. Grimes, Stephanie Greer, et al.. (2021). Characterization of the consensus mucosal microbiome of colorectal cancer. NAR Cancer. 3(4). zcab049–zcab049. 15 indexed citations

Lee, HoJoon, Howard Y. Chang, Seung Woo Cho, & Hanlee P. Ji. (2020). CRISPRpic: fast and precise analysis for CRISPR-induced mutations via p refixed i ndex c ounting. NAR Genomics and Bioinformatics. 2(2). lqaa012–lqaa012. 12 indexed citations

10.

Sathe, Anuja, Susan M. Grimes, Billy T. Lau, et al.. (2020). Single-Cell Genomic Characterization Reveals the Cellular Reprogramming of the Gastric Tumor Microenvironment. Clinical Cancer Research. 26(11). 2640–2653. 229 indexed citations

11.

Lee, HoJoon, et al.. (2020). Unique k -mer sequences for validating cancer-related substitution, insertion and deletion mutations. NAR Cancer. 2(4). zcaa034–zcaa034. 6 indexed citations

12.

Zlitni, Soumaya, Alex Bishara, Eli L. Moss, et al.. (2020). Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale. Genome Medicine. 12(1). 50–50. 34 indexed citations

13.

Shin, Gi Won, Stephanie Greer, HoJoon Lee, et al.. (2019). Targeted short read sequencing and assembly of re-arrangements and candidate gene loci provide megabase diplotypes. Nucleic Acids Research. 47(19). e115–e115. 8 indexed citations

14.

Zhou, Bo, Steve S. Ho, Stephanie Greer, et al.. (2019). Haplotype-resolved and integrated genome analysis of the cancer cell line HepG2. Nucleic Acids Research. 47(8). 3846–3861. 41 indexed citations

15.

Zhou, Bo, Steve S. Ho, Stephanie Greer, et al.. (2019). Comprehensive, integrated, and phased whole-genome analysis of the primary ENCODE cell line K562. Genome Research. 29(3). 472–484. 60 indexed citations

16.

Ai, Dongmei, HoJoon Lee, Noemi Andor, et al.. (2018). SVEngine: an efficient and versatile simulator of genome structural variations with features of cancer clonal evolution. GigaScience. 7(7). 10 indexed citations

17.

Miotke, Laura, Arindam Maity, Hanlee P. Ji, Jonathan R. Brewer, & Kira Astakhova. (2015). Enzyme-Free Detection of Mutations in Cancer DNA Using Synthetic Oligonucleotide Probes and Fluorescence Microscopy. PLoS ONE. 10(8). e0136720–e0136720. 16 indexed citations

18.

Schiffman, Joshua D., John Hodgson, Scott R. VandenBerg, et al.. (2010). Oncogenic BRAF Mutation with CDKN2A Inactivation Is Characteristic of a Subset of Pediatric Malignant Astrocytomas. Cancer Research. 70(2). 512–519. 185 indexed citations

19.

Dahl, Fredrik A., Johan A. Stenberg, Simon Fredriksson, et al.. (2007). Multigene amplification and massively parallel sequencing for cancer mutation discovery. Proceedings of the National Academy of Sciences. 104(22). 9387–9392. 125 indexed citations

20.

Ji, Hanlee P., Jochen Kumm, Michael Zhang, et al.. (2006). Molecular Inversion Probe Analysis of Gene Copy Alterations Reveals Distinct Categories of Colorectal Carcinoma. Cancer Research. 66(16). 7910–7919. 21 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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