Hamid Bolouri

14.3k citations

98 papers · 4.4k indexed · 1 hit paper · h-index 32

Impact in

Molecular Biology top 2%
- Gene Regulatory Network Analysis
- Bioinformatics and Genomic Networks
- Microbial Metabolic Engineering and Bioproduction
- Genomics and Chromatin Dynamics
- Developmental Biology and Gene Regulation
- Single-cell and spatial transcriptomics
Immunology top 5%
- Immune cells in cancer

Papers in

Hardware and Architecture 9
Molecular Biology 52
- Gene Regulatory Network Analysis 24
- Bioinformatics and Genomic Networks 16
- Microbial Metabolic Engineering and Bioproduction 12
- Single-cell and spatial transcriptomics 10
- Genomics and Chromatin Dynamics 7

Co-authors: Eric H. Davidson Alistair G. Rust Stephen A. Ramsey David Orrell William J.R. Longabaugh Vésteinn Thórsson Kathleen A. Kennedy Martin Korb
Journals: Proceedings of the National Academy of Sciences (5 papers)Blood (4 papers)Developmental Biology (4 papers)Scientific Reports (2 papers)Nature Communications (2 papers)
Partner nations: United States United Kingdom South Africa

In The Last Decade

Hamid Bolouri

93 papers receiving 4.2k citations

Hit Papers

align trajectories log scale

Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4 2006 · 630 citations

Peers

Countries citing papers authored by Hamid Bolouri

Since Specialization

Citations

This map shows the geographic impact of Hamid Bolouri's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Hamid Bolouri with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Hamid Bolouri more than expected).

Fields of papers citing papers by Hamid Bolouri

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Hamid Bolouri. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Hamid Bolouri. The network helps show where Hamid Bolouri may publish in the future.

Co-authors

The 25 scholars most cited alongside Hamid Bolouri, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Hamid Bolouri Line = papers co-authored together Hamid Bolouri links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	Oncogenic role of a developmentally regulated NTRK2 splice variant Science Advances ·Siobhan S. Pattwell, Sonali Arora, Mohammed Al-zharani, Michael Zager, Keith R. Loeb, Patrick J. Cimino, 晴子飯田, В. О. Япаскурт, Hamid Bolouri, Андрюнин Константин Маратович, Frank Szulzewsky, Vaishnavi V. Phadnis, Tatsuya Ozawa, Michael J. Wagner, Michael C. Haffner, Junyue Cao, Jay Shendure, Eric C. Holland	2022	3
2	Inflammatory bone marrow signaling in pediatric acute myeloid leukemia distinguishes patients with poor outcomes Nature Communications ·Hamid Bolouri, Rhonda E. Ries, Alice Wiedeman, Huaming Yan, Mohesn Mokhtar, Vivian H. Gersuk, Kimberly O’Brien, Quynh-Anh Nguyen, Jenny L. Smith, S. Alice Long, Soheil Meshinchi	2022	3
3	The COVID-19 immune landscape is dynamically and reversibly correlated with disease severity Journal of Clinical Investigation ·Hamid Bolouri, Cate Speake, David Skibinski, S. Alice Long, Anne M. Hocking, Daniel Campbell, Jessica A. Hamerman, Uma Malhotra, Jane H. Buckner	2021	22
4	A B-cell developmental gene regulatory network is activated in infant AML PLoS ONE ·Hamid Bolouri, Rhonda E. Ries, Laura Pardo, Huaming Yan, Wanding Zhou, Jenny L. Smith, Amanda R. Leonti, Michael R. Loken, Jason E. Farrar, Timothy J. Triche, Soheil Meshinchi	2021	7
5	Variability in estimated gene expression among commonly used RNA-seq pipelines Scientific Reports ·Sonali Arora, Siobhan S. Pattwell, Eric C. Holland, Hamid Bolouri	2020	36
6	Integrative network modeling reveals mechanisms underlying T cell exhaustion Scientific Reports ·Hamid Bolouri, Mary H. Young, Joshua Beilke, Rebecca Johnson, Brian A. Fox, Lu Huang, Nino Zulfrianto, Christopher M. Hill, Anne-Renée Van der Vuurst de Vries, Paul Shannon, Andrew Dervan, Pallavur V. Sivakumar, Matthew Trotter, Douglas E. Bassett, Alexander V. Ratushny	2020	16
7	Neutrophil content predicts lymphocyte depletion and anti-PD1 treatment failure in NSCLC JCI Insight ·Julia Kargl, Xiaodong Zhu, Huajia Zhang, Grace Yang, Travis J. Friesen, DU Gonçalves, Dean Y. Maeda, John A. Zebala, Jill McKay-Fleisch, Gavin Meredith, Afshin Mashadi-Hossein, Christina S. Baik, Robert H. Pierce, Mary W. Redman, Jeffrey C. Thompson, Steven Μ. Albelda, Hamid Bolouri, A. McGarry Houghton	2019	127
8	Crebbp Loss Drives Small Cell Lung Cancer and Increases Sensitivity to HDAC Inhibition Cancer Discovery ·Deshui Jia, Arnaud Augert, Dong Wook Kim, Emily Eastwood, Nan Wu, Ali H. Ibrahim, Kee‐Beom Kim, Colin T. Dunn, Smitha P.S. Pillai, Adi F. Gazdar, Hamid Bolouri, (unknown), David MacPherson	2018	115
9	Altered Transcriptome Uniquely Associated with AML Vs. Normal Hematopoiesis Blood ·Yu Fan, Ying Hu, Cu Nguyen, Chunhua Yan, Rhonda E. Ries, Hamid Bolouri, Jenny L. Smith, Qingrong Chen, E. Anders Kolb, Soheil Meshinchi, Daoud Meerzaman	2017	1
10	Marked Differences in the Genomic Landscape of Pediatric Compared to Adult Acute Myeloid Leukemia: A Report from the Children's Oncology Group and NCI/COG Therapeutically Applicable Research to Generate Effective Treatments (TARGET) Initiative Blood ·Jason E. Farrar, Hamid Bolouri, Rhonda E. Ries, Timothy J. Triche, Emilia L. Lim, Todd A. Alonzo, Yussanne Ma, Richard A. Moore, Andrew J. Mungall, Marco A. Marra, Jaime Guidry Auvil, Tanja M. Davidsen, Patee Gesuwan, Leandro C. Hermida, E. Anders Kolb, Alan S. Gamis, Malcolm A. Smith, Daniela S. Gerhard, Soheil Meshinchi	2016	2
11	A gene regulatory network armature for T lymphocyte specification Proceedings of the National Academy of Sciences ·Constantin Georgescu, William J.R. Longabaugh, Deirdre D. Scripture-Adams, 于晓娟, Mary A. Yui, Mark A. Zarnegar, Hamid Bolouri, Ellen V. Rothenberg	2008	77
12	A data integration methodology for systems biology Proceedings of the National Academy of Sciences ·Daehee Hwang, Alistair G. Rust, Stephen A. Ramsey, Jennifer J. Smith, Deena M. Leslie Pedrioli, Andrea D. Weston, Pedro de Atauri, John D. Aitchison, Leroy Hood, Andrew F. Siegel, Hamid Bolouri	2005	254
13	A data integration methodology for systems biology: Experimental verification Proceedings of the National Academy of Sciences ·Daehee Hwang, Jennifer J. Smith, Deena M. Leslie Pedrioli, Andrea D. Weston, Alistair G. Rust, Stephen A. Ramsey, Pedro de Atauri, Andrew F. Siegel, Hamid Bolouri, John D. Aitchison, Leroy Hood	2005	92
14	Computation in Cells and Tissues: Perspectives and Tools of Thought (Natural Computing Series) Springer eBooks ·Hamid Bolouri, Ray Paton, Mike Holcombe	2004	1
15	Computational Modeling of Genetic and Biochemical Networks (Computational Molecular Biology) The MIT Press eBooks ·James M. Bower, Hamid Bolouri	2004	14
16	New Computational Approaches for Analysis of cis-Regulatory Networks Developmental Biology ·C. Titus Brown, Alistair G. Rust, Peter Clarke, Zhengjun Pan, Maria J. Schilstra, Hazlina Safitri, Leigh Synman, B Wold, R. Andrew Cameron, Eric H. Davidson, Hamid Bolouri	2002	86
17	Molecular self-organisation in a developmental model for the evolution of large-scale artificial neural networks University of Hertfordshire Research Archive (University of Hertfordshire) ·Hamid Bolouri, Rod Adams, Stella George, Alistair G. Rust	1998	2
18	Rotation, Translation, and Scaling Tolerant Recognition of Complex Shapes Using a Hierarchical Self-Organising Neural Network. International Conference on Neural Information Processing ·Han Ming Yeo, 邦明白鳥, Hamid Bolouri	1997	6
19	Artificial Evolution: Modelling the Development of the Retina University of Hertfordshire Research Archive (University of Hertfordshire) ·Alistair G. Rust, Yan-Zhuan Xiao, Thomas Gebrauchsgesten, Hamid Bolouri	1996	1
20	High-Speed Airborne Particle Monitoring Using Artificial Neural Networks OpenGrey (Institut de l'Information Scientifique et Technique) ·邦明白鳥, Han Ming Yeo, Paul H. Kaye, L. C. W. Dixon, Hamid Bolouri	1995	2

About Hamid Bolouri

Hamid Bolouri is a scholar working on Hardware and Architecture, Molecular Biology, Genetics, Hematology and Aging, having authored 98 papers that have together received 4.4k indexed citations. Recurring topics across this work include Gene Regulatory Network Analysis (24 papers), Bioinformatics and Genomic Networks (16 papers), Microbial Metabolic Engineering and Bioproduction (12 papers), Neural Networks and Applications (10 papers), Single-cell and spatial transcriptomics (10 papers), Genomics and Chromatin Dynamics (7 papers), Acute Myeloid Leukemia Research (7 papers) and Semiconductor materials and devices (7 papers). The work is most often cited by research in Molecular Biology (2.9k citations), Immunology (733 citations), Genetics (367 citations), Cancer Research (426 citations) and Aging (42 citations). Hamid Bolouri has collaborated with scholars based in United States, United Kingdom and South Africa. Frequent co-authors include Eric H. Davidson, Alistair G. Rust, Stephen A. Ramsey, David Orrell, William J.R. Longabaugh, Vésteinn Thórsson, Kathleen A. Kennedy, Martin Korb, Mark Gilchrist and Alan Aderem. Their work appears in journals such as Proceedings of the National Academy of Sciences, Blood, Developmental Biology, Scientific Reports and Nature Communications.

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