Daniel A. Skelly

2.8k citations

34 papers · 1.7k indexed · 1 hit paper · h-index 16

Molecular Biology top 10%
Cardiology and Cardiovascular Medicine top 5%
Genetics top 10%
Food Science top 5%
Plant Science top 10%

Co-authors: Nadia Rosenthal Micheal A. McLellan Alexander R. Pinto Galen T Squiers Joshua M. Akey Paul Robson Mohan Bolisetty Paul M. Magwene
Topics: Genetic Mapping and Diversity in Plants and Animals (10 papers)Fungal and yeast genetics research (7 papers)Epigenetics and DNA Methylation (5 papers)
Cited by: Cardiology and Cardiovascular Medicine Molecular Biology Aging
Journals: Nucleic Acids Research Circulation The EMBO Journal
Partner nations: United States United Kingdom Australia

In The Last Decade

Daniel A. Skelly

33 papers receiving 1.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Single-Cell Transcriptional Profiling Reveals Cellular Diversity and Intercommunication in the Mouse Heart

2018 373 citations Daniel A. Skelly, Galen T Squiers et al. Cell Reports profile →

Peers

Countries citing papers authored by Daniel A. Skelly

Since Specialization

Citations

This map shows the geographic impact of Daniel A. Skelly's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Daniel A. Skelly with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Daniel A. Skelly more than expected).

Fields of papers citing papers by Daniel A. Skelly

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Daniel A. Skelly. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Daniel A. Skelly. The network helps show where Daniel A. Skelly may publish in the future.

Co-authorship network of co-authors of Daniel A. Skelly

This figure shows the co-authorship network connecting the top 25 collaborators of Daniel A. Skelly. A scholar is included among the top collaborators of Daniel A. Skelly based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Daniel A. Skelly. Daniel A. Skelly is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Mapping the genetic landscape establishing a tumor immune microenvironment favorable for anti-PD-1 response 2025 ·Cell Reports ·Daniel A. Skelly,(unknown),Mingshan Cheng,Mayuko Furuta,(unknown),Thomas A. Stoklasek,(unknown),(unknown),Olivier Poirion,Jigang Zhang,Jessica Grassmann,Diane Luo,William F. Flynn,Elise T. Courtois,Chih-Hao Chang,David Serreze,Francesca Menghi,Laura G. Reinholdt,Edison T. Liu	2
2	Systems genetics reveals the influence of expression QTLs in mouse embryonic stem cells on transcriptional variation later in differentiated neural progenitor cells 2025 ·G3 Genes Genomes Genetics ·(unknown),Daniel A. Skelly,(unknown),J. Matthew Mahoney,Ted Choi,Laura G. Reinholdt,Christopher L. Baker,Steven C. Munger	0
3	Enhlink infers distal and context-specific enhancer–promoter linkages 2024 ·Genome biology ·Olivier Poirion,Wu‐Lin Zuo,(unknown),Candice N. Baker,(unknown),(unknown),Daniel A. Skelly,Elissa J. Chesler,Christopher L. Baker,Brian S. White	1
4	Genetic dissection of the pluripotent proteome through multi-omics data integration 2023 ·Cell Genomics ·(unknown),(unknown),Tian Zhang,Gregory R. Keele,Daniel A. Skelly,João A. Paulo,Matthew Pankratz,Ted Choi,Steven P. Gygi,Laura G. Reinholdt,Christopher L. Baker,Gary A. Churchill,Steven C. Munger	8
5	RNA viruses, M satellites, chromosomal killer genes, and killer/nonkiller phenotypes in the 100-genomes S. cerevisiae strains 2023 ·G3 Genes Genomes Genetics ·(unknown),Stanislav G. Kozmin,Pooja K Strope,Daniel A. Skelly,Paul M. Magwene,Fred S. Dietrich,John H. McCusker	6
6	Imputation of 3D genome structure by genetic–epigenetic interaction modeling in mice 2023 ·eLife ·(unknown),Daniel A. Skelly,Anne Czechanski,(unknown),Steven C. Munger,Christopher L. Baker,Laura G. Reinholdt,Gregory W. Carter	1
7	Natural genetic variation determines microglia heterogeneity in wild-derived mouse models of Alzheimer’s disease 2021 ·Cell Reports ·Hongtian Yang,Kristen D. Onos,Kwangbom Choi,(unknown),Daniel A. Skelly,Gregory W. Carter,Gareth R. Howell	53
8	Improved mouse models and advanced genetic and genomic technologies for the study of neutrophils 2020 ·Drug Discovery Today ·Vishnu Hosur,Daniel A. Skelly,(unknown),Benjamin E. Low,Vivek Kohar,Lisa Burzenski,Mansoor M. Amiji,Leonard D. Shultz,Michael V. Wiles	4
9	Naive Pluripotent Stem Cells Exhibit Phenotypic Variability that Is Driven by Genetic Variation 2020 ·Cell stem cell ·Daniel Ortmann,Stephanie Brown,Anne Czechanski,(unknown),Daniele Muraro,Yuanhua Huang,Rute A. Tomaz,Anna Osnato,Giovanni Canu,Brandon T. Wesley,Daniel A. Skelly,Oliver Stegle,Ted Choi,Gary A. Churchill,Christopher L. Baker,Peter J. Rugg‐Gunn,Steven C. Munger,Laura G. Reinholdt,Ludovic Vallier	31
10	Dynamic Interstitial Cell Response during Myocardial Infarction Predicts Resilience to Rupture in Genetically Diverse Mice 2020 ·Cell Reports ·Elvira Forte,Daniel A. Skelly,Mandy Chen,(unknown),Kaesi A. Morelli,Olivia J. Hon,Vivek M. Philip,Mauro W. Costa,Nadia Rosenthal,Milena B. Furtado	128
11	High-Resolution Transcriptomic Profiling of the Heart During Chronic Stress Reveals Cellular Drivers of Cardiac Fibrosis and Hypertrophy 2020 ·Circulation ·Micheal A. McLellan,Daniel A. Skelly,Malathi S.I. Dona,Galen T Squiers,(unknown),(unknown),Charles D. Cohen,Raghav Pandey,Henry Diep,Antony Vinh,Nadia Rosenthal,Alexander R. Pinto	178
12	Reference Trait Analysis Reveals Correlations Between Gene Expression and Quantitative Traits in Disjoint Samples 2019 ·Genetics ·Daniel A. Skelly,Narayanan Raghupathy,Raymond F. Robledo,Joel H. Graber,Elissa J. Chesler	6
13	Single-Cell Transcriptional Profiling Reveals Cellular Diversity and Intercommunication in the Mouse Heartbreakdown → 2018 ·Cell Reports ·Daniel A. Skelly,Galen T Squiers,Micheal A. McLellan,Mohan Bolisetty,Paul Robson,Nadia Rosenthal,Alexander R. Pinto	373
14	Known mutator alleles do not markedly increase mutation rate in clinical Saccharomyces cerevisiae strains 2017 ·Proceedings of the Royal Society B Biological Sciences ·Daniel A. Skelly,Paul M. Magwene,(unknown),Helen A. Murphy	9
15	Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice 2017 ·Nucleic Acids Research ·Molly A. Bogue,Stephen C. Grubb,(unknown),Vivek M. Philip,(unknown),Timothy M. Stearns,(unknown),Daniel A. Skelly,Beena M. Kadakkuzha,(unknown),Govindarajan Kunde‐Ramamoorthy,Elissa J. Chesler	43
16	Sporadic, Global Linkage Disequilibrium Between Unlinked Segregating Sites 2015 ·Genetics ·Daniel A. Skelly,Paul M. Magwene,Eric A. Stone	14
17	The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen 2015 ·Genome Research ·Pooja K Strope,Daniel A. Skelly,Stanislav G. Kozmin,(unknown),Eric A. Stone,Paul M. Magwene,Fred S. Dietrich,John H. McCusker	260
18	2μ plasmid inSaccharomycesspecies and inSaccharomyces cerevisiae 2015 ·FEMS Yeast Research ·Pooja K Strope,Stanislav G. Kozmin,Daniel A. Skelly,Paul M. Magwene,Fred S. Dietrich,John H. McCusker	17
19	Population Genomics and Transcriptional Consequences of Regulatory Motif Variation in Globally Diverse Saccharomyces cerevisiae Strains 2013 ·Molecular Biology and Evolution ·Caitlin Connelly,Daniel A. Skelly,Maitreya J. Dunham,Joshua M. Akey	10
20	A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data 2011 ·Genome Research ·Daniel A. Skelly,Marnie Johansson,Jennifer Madeoy,Jon Wakefield,Joshua M. Akey	130

About Daniel A. Skelly

Daniel A. Skelly is a scholar working on Genetics, Molecular Biology and Neurology, having authored 34 papers that have together received 1.7k indexed citations. Recurring topics across this work include Genetic Mapping and Diversity in Plants and Animals (10 papers), Fungal and yeast genetics research (7 papers) and Epigenetics and DNA Methylation (5 papers). The work is most often cited by research in Cardiology and Cardiovascular Medicine (388 citations), Molecular Biology (1.2k citations) and Aging (27 citations). Daniel A. Skelly has collaborated with scholars based in United States, United Kingdom and Australia. Frequent co-authors include Nadia Rosenthal, Micheal A. McLellan, Alexander R. Pinto, Galen T Squiers, Joshua M. Akey, Paul Robson, Mohan Bolisetty, Paul M. Magwene, Eric A. Stone and Fred S. Dietrich. Their work appears in journals such as Nucleic Acids Research, Circulation and The EMBO Journal.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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