Alexander L. Perryman

2.3k citations

36 papers · 1.6k indexed · h-index 23

Molecular Biology top 10%
Infectious Diseases top 2%
Computational Theory and Mathematics top 1%
Virology top 2%
Materials Chemistry

Co-authors: J. Andrew McCammon Jung‐Hsin Lin Sean Ekins Joel S. Freundlich Arthur J. Olson Stefano Forli Carolina Horta Andrade Daniel N. Santiago
Topics: Computational Drug Discovery Methods (12 papers)HIV Research and Treatment (10 papers)HIV/AIDS drug development and treatment (10 papers)
Cited by: Virology Computational Theory and Mathematics Infectious Diseases
Journals: Journal of the American Chemical Society PLoS ONE Scientific Reports
Partner nations: United States Brazil United Kingdom

In The Last Decade

Alexander L. Perryman

36 papers receiving 1.6k citations

Peers

Countries citing papers authored by Alexander L. Perryman

Since Specialization

Citations

This map shows the geographic impact of Alexander L. Perryman's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Alexander L. Perryman with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Alexander L. Perryman more than expected).

Fields of papers citing papers by Alexander L. Perryman

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Alexander L. Perryman. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Alexander L. Perryman. The network helps show where Alexander L. Perryman may publish in the future.

Co-authorship network of co-authors of Alexander L. Perryman

This figure shows the co-authorship network connecting the top 25 collaborators of Alexander L. Perryman. A scholar is included among the top collaborators of Alexander L. Perryman based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Alexander L. Perryman. Alexander L. Perryman is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Machine Learning Platform to Discover Novel Growth Inhibitors of Neisseria gonorrhoeae 2020 ·Pharmaceutical Research ·(unknown),(unknown),Kimberley M. Zorn,(unknown),Riccardo Russo,Alexander L. Perryman,Xin Wang,(unknown),Sean Ekins,Joel S. Freundlich	7
2	A diarylamine derived from anthranilic acid inhibits ZIKV replication 2019 ·Scientific Reports ·(unknown),Jacqueline Farinha Shimizu,(unknown),(unknown),Cíntia Bittar,Melina Mottin,(unknown),(unknown),Luís Octávio Regasini,Paula Rahal,Glaucius Oliva,Alexander L. Perryman,Sean Ekins,Carolina Horta Andrade,Luíz Ricardo Goulart,Robinson Sabino‐Silva,Andres Merits,Mark Harris,Ana Carolina Gomes Jardim	15
3	The A–Z of Zika drug discovery 2018 ·Drug Discovery Today ·Melina Mottin,Joyce Villa Verde Bastos Borba,Rodolpho C. Braga,Pedro Henrique Monteiro Torres,Matheus Cavalheiro Martini,José Luiz Proença‐Módena,Carla C. Judice,Fábio Trindade Maranhão Costa,Sean Ekins,Alexander L. Perryman,Carolina Horta Andrade	48
4	Naïve Bayesian Models for Vero Cell Cytotoxicity 2018 ·Pharmaceutical Research ·Alexander L. Perryman,Jimmy S. Patel,Riccardo Russo,Eric Singleton,Nancy Connell,Sean Ekins,Joel S. Freundlich	27
5	Novel Pyrimidines as Antitubercular Agents 2018 ·Antimicrobial Agents and Chemotherapy ·Daigo Inoyama,(unknown),Riccardo Russo,(unknown),Pradeep Kumar,Eric Singleton,James Occi,Margareta Tuckman,Matthew Zimmerman,(unknown),Alexander L. Perryman,Véronique Dartois,Nancy Connell,Joel S. Freundlich	24
6	Molecular dynamics simulations of Zika virus NS3 helicase: Insights into RNA binding site activity 2017 ·Biochemical and Biophysical Research Communications ·Melina Mottin,Rodolpho C. Braga,Roosevelt Alves da Silva,(unknown),Alexander L. Perryman,Sean Ekins,Carolina Horta Andrade	28
7	Non-classical transpeptidases yield insight into new antibacterials 2016 ·Nature Chemical Biology ·Pankaj Kumar,Amit Kaushik,Evan P. Lloyd,Shao-Gang Li,Rohini Mattoo,Nicole C. Ammerman,(unknown),Alexander L. Perryman,(unknown),Sean Ekins,Stephan L. Ginell,Craig A. Townsend,Joel S. Freundlich,Gyanu Lamichhane	111
8	OpenZika: An IBM World Community Grid Project to Accelerate Zika Virus Drug Discovery 2016 ·PLoS neglected tropical diseases ·Sean Ekins,Alexander L. Perryman,Carolina Horta Andrade	25
9	Machine Learning Model Analysis and Data Visualization with Small Molecules Tested in a Mouse Model of Mycobacterium tuberculosis Infection (2014–2015) 2016 ·Journal of Chemical Information and Modeling ·Sean Ekins,Alexander L. Perryman,Alex M. Clark,Robert C. Reynolds,Joel S. Freundlich	22
10	Predicting Mouse Liver Microsomal Stability with “Pruned” Machine Learning Models and Public Data 2015 ·Pharmaceutical Research ·Alexander L. Perryman,(unknown),Sean Ekins,Joel S. Freundlich	41
11	Virtual screening of integrase inhibitors by large scale binding free energy calculations: the SAMPL4 challenge 2014 ·Journal of Computer-Aided Molecular Design ·Emilio Gallicchio,Nanjie Deng,Peng He,Lauren Wickstrom,Alexander L. Perryman,Daniel N. Santiago,Stefano Forli,Arthur J. Olson,Ronald M. Levy	48
12	Virtual screening with AutoDock Vina and the common pharmacophore engine of a low diversity library of fragments and hits against the three allosteric sites of HIV integrase: participation in the SAMPL4 protein–ligand binding challenge 2014 ·Journal of Computer-Aided Molecular Design ·Alexander L. Perryman,Daniel N. Santiago,Stefano Forli,Diogo Santos‐Martins,Arthur J. Olson	40
13	Biological Evaluation of Potent Triclosan‐Derived Inhibitors of the Enoyl–Acyl Carrier Protein Reductase InhA in Drug‐Sensitive and Drug‐Resistant Strains of Mycobacterium tuberculosis 2014 ·ChemMedChem ·Jozef Stec,Catherine Vilchèze,Shichun Lun,Alexander L. Perryman,Xin Wang,Joel S. Freundlich,William R. Bishai,William R. Jacobs,Alan P. Kozikowski	30
14	Structural basis for drug and substrate specificity exhibited by FIV encoding a chimeric FIV/HIV protease 2011 ·Acta Crystallographica Section D Biological Crystallography ·Ying‐Chuan Lin,Alexander L. Perryman,Arthur J. Olson,Bruce E. Torbett,John H. Elder,C.D. Stout	7
15	Fragment‐Based Screen against HIV Protease 2010 ·Chemical Biology & Drug Design ·Alexander L. Perryman,Qing Zhang,Holly H. Soutter,R.J. Rosenfeld,Duncan E. McRee,Arthur J. Olson,(unknown),C.D. Stout	56
16	Optimization and Computational Evaluation of a Series of Potential Active Site Inhibitors of the V82F/I84V Drug‐resistant Mutant of HIV‐1 Protease: an Application of the Relaxed Complex Method of Structure‐based Drug Design 2006 ·Chemical Biology & Drug Design ·Alexander L. Perryman,Jung‐Hsin Lin,J. Andrew McCammon	19
17	Restrained molecular dynamics simulations of HIV‐1 protease: The first step in validating a new target for drug design 2006 ·Biopolymers ·Alexander L. Perryman,Jung‐Hsin Lin,J. Andrew McCammon	46
18	HIV‐1 protease molecular dynamics of a wild‐type and of the V82F/I84V mutant: Possible contributions to drug resistance and a potential new target site for drugs 2004 ·Protein Science ·Alexander L. Perryman,Jung‐Hsin Lin,J. Andrew McCammon	22
19	HIV‐1 protease molecular dynamics of a wild‐type and of the V82F/I84V mutant: Possible contributions to drug resistance and a potential new target site for drugs 2004 ·Protein Science ·Alexander L. Perryman,Jung‐Hsin Lin,J. Andrew McCammon	194
20	The relaxed complex method: Accommodating receptor flexibility for drug design with an improved scoring scheme 2002 ·Biopolymers ·Jung‐Hsin Lin,Alexander L. Perryman,(unknown),J. Andrew McCammon	136

About Alexander L. Perryman

Alexander L. Perryman is a scholar working on Virology, Infectious Diseases and Computational Theory and Mathematics, having authored 36 papers that have together received 1.6k indexed citations. Recurring topics across this work include Computational Drug Discovery Methods (12 papers), HIV Research and Treatment (10 papers) and HIV/AIDS drug development and treatment (10 papers). The work is most often cited by research in Virology (308 citations), Computational Theory and Mathematics (554 citations) and Infectious Diseases (591 citations). Alexander L. Perryman has collaborated with scholars based in United States, Brazil and United Kingdom. Frequent co-authors include J. Andrew McCammon, Jung‐Hsin Lin, Sean Ekins, Joel S. Freundlich, Arthur J. Olson, Stefano Forli, Carolina Horta Andrade, Daniel N. Santiago, Alex M. Clark and Robert C. Reynolds. Their work appears in journals such as Journal of the American Chemical Society, PLoS ONE and Scientific Reports.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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