Xiaojun Xu

5.3k citations

94 papers · 2.8k indexed · 3 hit papers · h-index 22

Infectious Diseases top 2%
Molecular Biology top 5%
- RNA and protein synthesis mechanisms 33
- RNA Research and Splicing 25
- RNA modifications and cancer 19
- DNA and Nucleic Acid Chemistry 11
- Protein Structure and Dynamics 10
- RNA Interference and Gene Delivery 7
Oncology top 10%
Neurology top 5%
Immunology top 10%
Computational Theory and Mathematics
- Computational Drug Discovery Methods 14
Biomedical Engineering
- Nanopore and Nanochannel Transport Studies 7

Co-authors: Shi‐Jie Chen Zhe‐Sheng Chen Kun Zhao Han Zhang Yehuda G. AssarafWen LiDong‐Hua Yang Jinbing Xie
Cited by: Infectious Diseases Molecular Biology Oncology
Journals: Proceedings of the National Academy of Sciences (2 papers)Journal of the American Chemical Society (2 papers)Nucleic Acids Research (4 papers)
Partner nations: China United States India

In The Last Decade

Xiaojun Xu

89 papers receiving 2.8k citations

Hit Papers

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Peers

Countries citing papers authored by Xiaojun Xu

Since Specialization

Citations

This map shows the geographic impact of Xiaojun Xu's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Xiaojun Xu with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Xiaojun Xu more than expected).

Fields of papers citing papers by Xiaojun Xu

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Xiaojun Xu. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Xiaojun Xu. The network helps show where Xiaojun Xu may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Xiaojun Xu, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Xiaojun Xu Line = papers co-authored together Xiaojun Xu links everyone, so they are left out of the graph.

All Works

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20 of 20 papers shown

#	Work
1	The prediction of RNA-small molecule binding sites in RNA structures based on geometric deep learning International Journal of Biological Macromolecules ·Chunjiang Sang,Jiasai Shu,Kang Wang,Wentao Xia,Yan Wang,Tingting Sun,Xiaojun Xu	2025	1
2	Advances and Challenges in Machine Learning for RNA-Small Molecule Interaction Modeling: Review Journal of Chemical Theory and Computation ·Tingting Sun,Wentao Xia,Jiasai Shu,Chunjiang Sang,Mei Lin Feng,Xiaojun Xu	2025	0
3	Fusing Domain Knowledge with a Fine-Tuned Large Language Model for Enhanced Molecular Property Prediction Journal of Chemical Theory and Computation ·Liangxu Xie,Ying-Di Jin,Lei Xu,Shan Chang,Xiaojun Xu	2025	2
4	Multimodal fused deep learning for drug property prediction: Integrating chemical language and molecular graph Computational and Structural Biotechnology Journal ·Xiaohua Lu,Liangxu Xie,Lei Xu,Rongzhi Mao,Xiaojun Xu,Shan Chang	2024	18
5	Harnessing Multiple Level Features to Improve Segmentation Performance of Deep Neural Network: A Case Study in Magnetic Resonance Imaging of Nasopharyngeal Cancer IEEE Access ·Rongzhi Mao,Liangxu Xie,Xiaohua Lu,Jialu Pei,Xiaojun Xu,Shan Chang	2024	1
6	Developing an Improved Cycle Architecture for AI-Based Generation of New Structures Aimed at Drug Discovery Molecules ·C. N. Zhang,Liangxu Xie,Xiaohua Lü,Rongzhi Mao,Lei Xu,Xiaojun Xu	2024	2
7	Application of Machine Learning Methods to Predict the Air Half-Lives of Persistent Organic Pollutants Molecules ·Ying Zhang,Liangxu Xie,Dawei Zhang,Xiaojun Xu,Lei Xu	2023	0
8	Decision tree‐based identification of important molecular fragments for protein‐ligand binding Chemical Biology & Drug Design ·Baiyi Li,Yunsong Wang,Zuode Yin,Lei Xu,Liangxu Xie,Xiaojun Xu	2023	2
9	cRNAsp12 Web Server for the Prediction of Circular RNA Secondary Structures and Stabilities International Journal of Molecular Sciences ·Fengfei Wang,Wei Li,Baiyi Li,Liangxu Xie,Yunguang Tong,Xiaojun Xu	2023	7
10	Neural networks prediction of the protein-ligand binding affinity with circular fingerprints Technology and Health Care ·Zuode Yin,Wei Song,Baiyi Li,Fengfei Wang,Liangxu Xie,Xiaojun Xu	2023	4
11	Elucidation of Binding Features and Dissociation Pathways of Inhibitors and Modulators in SARS-CoV-2 Main Protease by Multiple Molecular Dynamics Simulations Molecules ·Lei Xu,Liangxu Xie,Dawei Zhang,Xiaojun Xu	2022	4
12	Deep Convolutional Neural Network for Nasopharyngeal Carcinoma Discrimination on MRI by Comparison of Hierarchical and Simple Layered Convolutional Neural Networks Diagnostics ·Ji Li,Rongzhi Mao,Jian Wu,Cheng Ge,Feng Xiao,Xiaojun Xu,Liangxu Xie,Xiaofeng Gu	2022	10
13	Vfold2D-MC: A Physics-Based Hybrid Model for Predicting RNA Secondary Structure Folding The Journal of Physical Chemistry B ·Yi Cheng,Sicheng Zhang,Xiaojun Xu,Shi‐Jie Chen	2021	17
14	The translocation dynamics of the polymer through a conical pore: Non-stuck, weak-stuck, and strong-stuck modes The Journal of Chemical Physics ·Li‐Zhen Sun,Wei‐Ping Cao,Changhui Wang,Xiaojun Xu	2021	11
15	Topological constraints of RNA pseudoknotted and loop-kissing motifs: applications to three-dimensional structure prediction Nucleic Acids Research ·Xiaojun Xu,Shi‐Jie Chen	2020	16
16	Kinetic Mechanism of RNA Helix-Terminal Basepairing—A Kinetic Minima Network Analysis Biophysical Journal ·Fengfei Wang,Li‐Zhen Sun,Pinggen Cai,Shi‐Jie Chen,Xiaojun Xu	2019	5
17	Helix-Based RNA Landscape Partition and Alternative Secondary Structure Determination ACS Omega ·Fengfei Wang,Li‐Zhen Sun,Tingting Sun,Shan Chang,Xiaojun Xu	2019	2
18	A self-assembling collagen mimetic peptide system to simultaneously characterize the effects of osteogenesis imperfecta mutations on conformation, assembly and activity Journal of Materials Chemistry B ·Xiuxia Sun,Zhao Liu,Sha Zhao,Xiaojun Xu,Shenlin Wang,Chengchen Guo,Jianxi Xiao	2019	5
19	Can you fool AI with adversarial examples on a visual Turing test arXiv (Cornell University) ·Xiaojun Xu,Xinyun Chen,Chang Liu,Anna Rohrbach,Trevor Darrell,Dawn Song	2017	13
20	Understanding the kinetic mechanism of RNA single base pair formation Proceedings of the National Academy of Sciences ·Xiaojun Xu,Tao Yu,Shi‐Jie Chen	2015	34

About Xiaojun Xu

Xiaojun Xu is a scholar working on Computational Theory and Mathematics, Molecular Biology and Virology, having authored 94 papers that have together received 2.8k indexed citations. Recurring topics across this work include RNA and protein synthesis mechanisms (33 papers), RNA Research and Splicing (25 papers), RNA modifications and cancer (19 papers), Computational Drug Discovery Methods (14 papers), DNA and Nucleic Acid Chemistry (11 papers), Protein Structure and Dynamics (10 papers), RNA Interference and Gene Delivery (7 papers) and Nanopore and Nanochannel Transport Studies (7 papers). The work is most often cited by research in Infectious Diseases (755 citations), Molecular Biology (1.5k citations) and Oncology (424 citations). Xiaojun Xu has collaborated with scholars based in China, United States and India. Frequent co-authors include Shi‐Jie Chen, Zhe‐Sheng Chen, Kun Zhao, Han Zhang, Yehuda G. Assaraf, Wen Li, Dong‐Hua Yang, Jinbing Xie, Bjoern Peters and Alessandro Sette. Their work appears in journals such as Proceedings of the National Academy of Sciences, Journal of the American Chemical Society and Nucleic Acids Research.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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