Tomer Altman

4.4k citations

12 papers · 2.7k indexed · 3 hit papers · h-index 10

Co-authors: Peter D. Karp Suzanne Paley Markus Krummenacker Ron Caspi Mario Latendresse Ingrid M. Keseler Kate Dreher Lukas A. Mueller
Topics: Microbial Metabolic Engineering and Bioproduction (9 papers)Bioinformatics and Genomic Networks (7 papers)Genomics and Phylogenetic Studies (4 papers)
Cited by: Molecular Biology Endocrinology Ecology
Journals: Nature Nucleic Acids Research PLoS ONE
Partner nations: United States Canada Russia

In The Last Decade

Tomer Altman

12 papers receiving 2.7k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

2013 867 citations Ron Caspi, Tomer Altman et al. Nucleic Acids Research profile →
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology

2009 538 citations Peter D. Karp, Suzanne Paley et al. Briefings in Bioinformatics profile →
Petabase-scale sequence alignment catalyses viral discovery

2022 264 citations R. C. Edgar, Victor S.-Y. Lin et al. Nature profile →

Peers

Countries citing papers authored by Tomer Altman

Since Specialization

Citations

This map shows the geographic impact of Tomer Altman's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Tomer Altman with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Tomer Altman more than expected).

Fields of papers citing papers by Tomer Altman

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Tomer Altman. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Tomer Altman. The network helps show where Tomer Altman may publish in the future.

Co-authorship network of co-authors of Tomer Altman

This figure shows the co-authorship network connecting the top 25 collaborators of Tomer Altman. A scholar is included among the top collaborators of Tomer Altman based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Tomer Altman. Tomer Altman is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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12 of 12 papers shown

#	Work	Indexed citations
1	Petabase-scale sequence alignment catalyses viral discoverybreakdown → 2022 ·Nature ·R. C. Edgar,(unknown),Victor S.-Y. Lin,Tomer Altman,Pierre Barbera,Dmitry Meleshko,(unknown),(unknown),Benjamin Buchfink,Basem Al-Shayeb,Jillian F. Banfield,Marcos de la Peña,Anton Korobeynikov,Rayan Chikhi,Artem Babaian	264
2	A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data 2020 ·Frontiers in Microbiology ·Xiaochen Yin,Tomer Altman,Erica Rutherford,Kiana West,(unknown),Jinlyung Choi,Paul L. Beck,Gilaad G. Kaplan,Karim Dabbagh,Todd Z. DeSantis,Shoko Iwai	21
3	A geographically-diverse collection of 418 human gut microbiome pathway genome databases 2017 ·Scientific Data ·Aria S Hahn,Tomer Altman,Kishori M. Konwar,Niels W. Hanson,Dongjae Kim,David A. Relman,David L. Dill,Steven Hallam	7
4	Finding Sequences for over 270 Orphan Enzymes 2014 ·PLoS ONE ·Alexander G. Shearer,Tomer Altman,(unknown)	14
5	Metabolic pathways for the whole community 2014 ·BMC Genomics ·Niels W. Hanson,Kishori M. Konwar,Alyse K. Hawley,Tomer Altman,Peter D. Karp,Steven Hallam	37
6	The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databasesbreakdown → 2013 ·Nucleic Acids Research ·Ron Caspi,Tomer Altman,Richard Billington,Kate Dreher,Hartmut Foerster,Carol A. Fulcher,Timothy A. Holland,Ingrid M. Keseler,Anamika Kothari,(unknown),Markus Krummenacker,Mario Latendresse,Lukas A. Mueller,Quang Ong,Suzanne Paley,Pallavi Subhraveti,Daniel Weaver,Deepika Weerasinghe,Peifen Zhang,Peter D. Karp	867
7	A systematic comparison of the MetaCyc and KEGG pathway databases 2013 ·BMC Bioinformatics ·Tomer Altman,Michael Travers,Anamika Kothari,Ron Caspi,Peter D. Karp	118
8	Data Mining in the MetaCyc Family of Pathway Databases 2012 ·Methods in molecular biology ·Peter D. Karp,Suzanne Paley,Tomer Altman	6
9	The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases 2011 ·Nucleic Acids Research ·Rachel R Caspi,Tomer Altman,Kate Dreher,CA Fulcher,Pallavi Subhraveti,Ingrid M. Keseler,A Kothari,Markus Krummenacker,Mario Latendresse,Lukas A. Mueller,Quang Ong,Suzanne Paley,Anuradha Pujar,Alexander G. Shearer,Michael Travers,Deepika Weerasinghe,(unknown),Peter D. Karp	457
10	Beyond the genome (BTG) is a (PGDB) pathway genome database: HumanCyc 2010 ·Genome Biology ·Miles Trupp,Tomer Altman,Carol A. Fulcher,Ron Caspi,Markus Krummenacker,Suzanne Paley,Peter D. Karp	27
11	The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases 2009 ·Nucleic Acids Research ·Ron Caspi,Tomer Altman,(unknown),Kate Dreher,Carol A. Fulcher,(unknown),(unknown),Athikkattuvalasu S. Karthikeyan,Anamika Kothari,Markus Krummenacker,Mario Latendresse,Lukas A. Mueller,Suzanne Paley,Liviu Popescu,Anuradha Pujar,Alexander G. Shearer,Peifen Zhang,Peter D. Karp	376
12	Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biologybreakdown → 2009 ·Briefings in Bioinformatics ·Peter D. Karp,Suzanne Paley,Markus Krummenacker,Mario Latendresse,(unknown),(unknown),(unknown),(unknown),Aaron Spaulding,Liviu Popescu,Tomer Altman,Ian T. Paulsen,Ingrid M. Keseler,Ron Caspi	538

About Tomer Altman

Tomer Altman is a scholar working on Molecular Biology, Computational Theory and Mathematics and Ecology, having authored 12 papers that have together received 2.7k indexed citations. Recurring topics across this work include Microbial Metabolic Engineering and Bioproduction (9 papers), Bioinformatics and Genomic Networks (7 papers) and Genomics and Phylogenetic Studies (4 papers). The work is most often cited by research in Molecular Biology (2.0k citations), Endocrinology (97 citations) and Ecology (442 citations). Tomer Altman has collaborated with scholars based in United States, Canada and Russia. Frequent co-authors include Peter D. Karp, Suzanne Paley, Markus Krummenacker, Ron Caspi, Mario Latendresse, Ingrid M. Keseler, Kate Dreher, Lukas A. Mueller, Anamika Kothari and Quang Ong. Their work appears in journals such as Nature, Nucleic Acids Research and PLoS ONE.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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