Shuai Weng

19.7k citations

29 papers · 5.2k indexed · 3 hit papers · h-index 16

Co-authors: J. Michael Cherry David Botstein Gavin Sherlock Jeremy Gollub Benjamin C. Hitz Alan P. Boyle Maya Kasowski Manoj Hariharan
Topics: Fungal and yeast genetics research (15 papers)Bioinformatics and Genomic Networks (10 papers)Microbial Metabolic Engineering and Bioproduction (10 papers)
Cited by: Aging Molecular Biology Genetics
Journals: Nature Science Nucleic Acids Research
Partner nations: United States China United Kingdom

In The Last Decade

Shuai Weng

28 papers receiving 5.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Annotation of functional variation in personal genomes using RegulomeDB

2012 1.7k citations Alan P. Boyle, Eurie L. Hong et al. Genome Research profile →
GO::TermFinder—open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

2004 1.5k citations Shuai Weng, David Botstein et al. profile →
Saccharomyces genome database

2002 531 citations Laurie Issel‐Tarver, Karen Christie et al. Methods in enzymology on CD-ROM/Methods in enzymology profile →

Peers

Countries citing papers authored by Shuai Weng

Since Specialization

Citations

This map shows the geographic impact of Shuai Weng's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Shuai Weng with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Shuai Weng more than expected).

Fields of papers citing papers by Shuai Weng

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Shuai Weng. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Shuai Weng. The network helps show where Shuai Weng may publish in the future.

Co-authorship network of co-authors of Shuai Weng

This figure shows the co-authorship network connecting the top 25 collaborators of Shuai Weng. A scholar is included among the top collaborators of Shuai Weng based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Shuai Weng. Shuai Weng is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	Automatic Model Transformation and Formal Verification for Function Block of IEC 61499 2025 ·Software & Systems Modeling ·(unknown),(unknown),Tao Li,(unknown),Shuai Weng,Mu‐Hung Tsai	0
2	Saccharomyces Genome Database: advances in genome annotation, expanded biochemical pathways, and other key enhancements 2024 ·Genetics ·Stacia R. Engel,Suzi Aleksander,Robert S Nash,Edith D. Wong,Shuai Weng,Stuart R. Miyasato,Gavin Sherlock,J. Michael Cherry	8
3	Saccharomyces genome database update: server architecture, pan-genome nomenclature, and external resources 2023 ·Genetics ·Edith D. Wong,Stuart R. Miyasato,Suzi Aleksander,Kalpana Karra,Robert S Nash,Marek S. Skrzypek,Shuai Weng,Stacia R. Engel,J. Michael Cherry	58
4	New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources 2021 ·Genetics ·Stacia R. Engel,Edith D. Wong,Robert S Nash,Suzi Aleksander,(unknown),Eric Douglass,Kalpana Karra,Stuart R. Miyasato,Matt Simison,Marek S. Skrzypek,Shuai Weng,J. Michael Cherry	43
5	Transcriptome visualization and data availability at the Saccharomyces Genome Database 2019 ·Nucleic Acids Research ·Patrick Ng,Edith D. Wong,Kevin MacPherson‐Hawthorne,Suzi Aleksander,Joanna Argasinska,Barbara Dunn,Robert S Nash,Marek S. Skrzypek,(unknown),(unknown),Kalpana Karra,Shuai Weng,Stuart R. Miyasato,Matt Simison,Stacia R. Engel,J. Michael Cherry	13
6	Integration of macromolecular complex data into theSaccharomycesGenome Database 2019 ·Database ·Edith D. Wong,Marek S. Skrzypek,Shuai Weng,Gail Binkley,Birgit Meldal,Livia Perfetto,Sandra Orchard,Stacia R. Engel,J. Michael Cherry,(unknown)	9
7	Saccharomyces genome database informs human biology 2017 ·Nucleic Acids Research ·Marek S. Skrzypek,Robert S Nash,Edith D. Wong,Kevin MacPherson‐Hawthorne,Sage T. Hellerstedt,Stacia R. Engel,Kalpana Karra,Shuai Weng,(unknown),Gail Binkley,Matt Simison,Stuart R. Miyasato,J. Michael Cherry	24
8	Curated protein information in the Saccharomyces genome database 2017 ·Database ·Sage T. Hellerstedt,Robert S Nash,Shuai Weng,Kelley Paskov,Edith D. Wong,Kalpana Karra,Stacia R. Engel,J. Michael Cherry	15
9	From one to many: expanding theSaccharomyces cerevisiaereference genome panel 2016 ·Database ·Stacia R. Engel,Shuai Weng,Gail Binkley,Kelley Paskov,Giltae Song,J. Michael Cherry	8
10	Integration of new alternative reference strain genome sequences into theSaccharomycesgenome database 2016 ·Database ·Giltae Song,Rama Balakrishnan,Gail Binkley,Maria C. Costanzo,(unknown),János Demeter,Stacia R. Engel,Sage T. Hellerstedt,Kalpana Karra,Benjamin C. Hitz,Robert S Nash,Kelley Paskov,(unknown),Marek S. Skrzypek,Shuai Weng,Edith D. Wong,J. Michael Cherry	13
11	TheSaccharomycesGenome Database Variant Viewer 2015 ·Nucleic Acids Research ·(unknown),Benjamin C. Hitz,Stacia R. Engel,Giltae Song,Rama Balakrishnan,Gail Binkley,Maria C. Costanzo,(unknown),János Demeter,Sage T. Hellerstedt,Kalpana Karra,Robert S Nash,Kelley Paskov,Marek S. Skrzypek,Shuai Weng,Edith D. Wong,J. Michael Cherry	20
12	Saccharomycesgenome database provides new regulation data 2013 ·Nucleic Acids Research ·Maria C. Costanzo,Stacia R. Engel,Edith D. Wong,Paul Lloyd,Kalpana Karra,Esther T. Chan,Shuai Weng,Kelley Paskov,(unknown),Gail Binkley,Benjamin C. Hitz,J. Michael Cherry	50
13	Annotation of functional variation in personal genomes using RegulomeDBbreakdown → 2012 ·Genome Research ·Alan P. Boyle,Eurie L. Hong,Manoj Hariharan,Yong Cheng,Marc A. Schaub,Maya Kasowski,Konrad J. Karczewski,Julie Park,Benjamin C. Hitz,Shuai Weng,J. Michael Cherry,M Snyder	1713
14	PatMatch: a program for finding patterns in peptide and nucleotide sequences 2005 ·Nucleic Acids Research ·Tingting Yan,Dong Hyun Yoo,Tanya Berardini,Lukas A. Mueller,(unknown),Shuai Weng,J. Michael Cherry,Seung Y. Rhee	149
15	Gene function, metabolic pathways and comparative genomics in yeast 2004 ·Qing Dong,Rama Balakrishnan,Gail Binkley,Karen Christie,Maria C. Costanzo,Kara Dolinski,Selina S. Dwight,Stacia R. Engel,D. G. Fisk,Jodi Hirschman,Eurie L. Hong,Robert S Nash,Laurie Issel‐Tarver,Anand Sethuraman,Chandra L. Theesfeld,Shuai Weng,David Botstein,J. Michael Cherry	1
16	Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins 2003 ·Nucleic Acids Research ·Shuai Weng	54
17	Saccharomyces genome databasebreakdown → 2002 ·Methods in enzymology on CD-ROM/Methods in enzymology ·Laurie Issel‐Tarver,Karen Christie,Kara Dolinski,(unknown),Rama Balakrishnan,Catherine A. Ball,Gail Binkley,(unknown),Selina S. Dwight,Dianna G. Fisk,Midori A. Harris,Mark Schroeder,Anand Sethuraman,Kane Tse,Shuai Weng,David Botstein,J. Michael Cherry	531
18	Unified display of Arabidopsis thaliana physical maps from AtDB, the A.thaliana database 1999 ·Nucleic Acids Research ·Seung Y. Rhee,Shuai Weng,(unknown),M. Garcia-Hernandez,(unknown),David J. Flanders,J. Michael Cherry	12
19	Using the Saccharomyces Genome Database (SGD) for analysis of protein similarities and structure 1999 ·Nucleic Acids Research ·Stephen A. Chervitz,Erich T. Hester,Catherine A. Ball,Kara Dolinski,Selina S. Dwight,Midori A. Harris,(unknown),(unknown),Stefan G. E. Roberts,(unknown),Charles Scafe,Mark Schroeder,Gavin Sherlock,Shuai Weng,Yuan Zhu,J. Michael Cherry,David Botstein	48
20	Genetic and physical maps of Saccharomyces cerevisiae 1997 ·Nature ·J. Michael Cherry,Catherine A. Ball,Shuai Weng,(unknown),(unknown),(unknown),Barbara Dunn,Selina S. Dwight,Linda Riles,Robert Mortimer,David Botstein	167

About Shuai Weng

Shuai Weng is a scholar working on Aging, Food Science and Molecular Biology, having authored 29 papers that have together received 5.2k indexed citations. Recurring topics across this work include Fungal and yeast genetics research (15 papers), Bioinformatics and Genomic Networks (10 papers) and Microbial Metabolic Engineering and Bioproduction (10 papers). The work is most often cited by research in Aging (105 citations), Molecular Biology (3.7k citations) and Genetics (1.0k citations). Shuai Weng has collaborated with scholars based in United States, China and United Kingdom. Frequent co-authors include J. Michael Cherry, David Botstein, Gavin Sherlock, Jeremy Gollub, Benjamin C. Hitz, Alan P. Boyle, Maya Kasowski, Manoj Hariharan, Konrad J. Karczewski and M Snyder. Their work appears in journals such as Nature, Science and Nucleic Acids Research.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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