Shoshana Brown

3.9k citations

37 papers · 1.8k indexed · 1 hit paper · h-index 20

Molecular Biology top 5%
Materials Chemistry top 10%
Renewable Energy, Sustainability and the Environment top 10%
Pharmacology top 10%
Organic Chemistry

Co-authors: Patricia C. Babbitt Alexandra M. Schnoes Igor Dodevski Steven C. Almo Elaine C. Meng Matthew P. Jacobson Thomas E. Ferrin Sunil Ojha
Topics: Protein Structure and Dynamics (14 papers)Enzyme Structure and Function (14 papers)Microbial Metabolic Engineering and Bioproduction (10 papers)
Cited by: Molecular Biology Biochemistry Renewable Energy, Sustainability and the Environment
Journals: Nature Proceedings of the National Academy of Sciences Nucleic Acids Research
Partner nations: United States Israel Canada

In The Last Decade

Shoshana Brown

37 papers receiving 1.8k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

2009 491 citations Alexandra M. Schnoes, Shoshana Brown et al. PLoS Computational Biology profile →

Peers

Countries citing papers authored by Shoshana Brown

Since Specialization

Citations

This map shows the geographic impact of Shoshana Brown's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Shoshana Brown with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Shoshana Brown more than expected).

Fields of papers citing papers by Shoshana Brown

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Shoshana Brown. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Shoshana Brown. The network helps show where Shoshana Brown may publish in the future.

Co-authorship network of co-authors of Shoshana Brown

This figure shows the co-authorship network connecting the top 25 collaborators of Shoshana Brown. A scholar is included among the top collaborators of Shoshana Brown based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Shoshana Brown. Shoshana Brown is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

#	Work	Indexed citations
1	A strategy for large-scale comparison of evolutionary- and reaction-based classifications of enzyme function 2020 ·Database ·Gemma L. Holliday,Shoshana Brown,(unknown),Benjamin J. Polacco,Patricia C. Babbitt	5
2	Atlas of the Radical SAM Superfamily: Divergent Evolution of Function Using a “Plug and Play” Domain 2018 ·Methods in enzymology on CD-ROM/Methods in enzymology ·Gemma L. Holliday,Eyal Akiva,Elaine C. Meng,Shoshana Brown,Sara Calhoun,Ursula Pieper,Andrej Săli,Squire J. Booker,Patricia C. Babbitt	97
3	Molecular Diversity of Terpene Synthases in the Liverwort Marchantia polymorpha 2016 ·The Plant Cell ·Santosh Kumar,Chase F. Kempinski,Xun Zhuang,(unknown),Sibongile Mafu,Jiachen Zi,Stephen A. Bell,S. Eric Nybo,(unknown),Zuodong Jiang,(unknown),(unknown),Xinlu Chen,Qidong Jia,Shoshana Brown,John L. Bowman,Patricia C. Babbitt,Reuben J. Peters,Feng Chen,Joe Chappell	55
4	Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification 2015 ·Nucleic Acids Research ·Jungwook Kim,Hui Xiao,(unknown),Yikai Wang,J.B. Bonanno,(unknown),Patricia C. Babbitt,Shoshana Brown,(unknown),Steven C. Almo	24
5	New Insights about Enzyme Evolution from Large Scale Studies of Sequence and Structure Relationships 2014 ·Journal of Biological Chemistry ·Shoshana Brown,Patricia C. Babbitt	49
6	Covalent Docking Predicts Substrates for Haloalkanoate Dehalogenase Superfamily Phosphatases 2014 ·Biochemistry ·Nir London,Jeremiah D. Farelli,Shoshana Brown,Chunliang Liu,Hua Huang,Magdalena Korczynska,Nawar Al-Obaidi,Patricia C. Babbitt,Steven C. Almo,Karen N. Allen,Brian K. Shoichet	23
7	Using the Structure‐Function Linkage Database to Characterize Functional Domains in Enzymes 2014 ·Current Protocols in Bioinformatics ·Shoshana Brown,Patricia C. Babbitt	5
8	The Structure–Function Linkage Database 2013 ·Nucleic Acids Research ·Eyal Akiva,Shoshana Brown,Daniel E. Almonacid,Alan E. Barber,(unknown),Michael Hicks,Conrad C. Huang,(unknown),Susan T. Mashiyama,Elaine C. Meng,(unknown),John H. Morris,Sunil Ojha,Alexandra M. Schnoes,Doug Stryke,Jeffrey M. Yunes,Thomas E. Ferrin,Gemma L. Holliday,Patricia C. Babbitt	189
9	Discovery of new enzymes and metabolic pathways by using structure and genome context 2013 ·Nature ·Suwen Zhao,Ritesh Kumar,A. Sakai,M.W. Vetting,B.M. Wood,Shoshana Brown,(unknown),B. Hillerich,R.D. Seidel,Patricia C. Babbitt,Steven C. Almo,Jonathan V. Sweedler,J.A. Gerlt,John E. Cronan,Matthew P. Jacobson	113
10	Structure-guided discovery of the metabolite carboxy-SAM that modulates tRNA function 2013 ·Nature ·Jungwook Kim,Hui Xiao,J.B. Bonanno,Chakrapani Kalyanaraman,Shoshana Brown,Xiang‐Ying Tang,Nawar Al-Obaidi,Y. Patskovsky,Patricia C. Babbitt,Matthew P. Jacobson,(unknown),Steven C. Almo	74
11	Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily 2012 ·Proceedings of the National Academy of Sciences ·Tiit Lukk,A. Sakai,Chakrapani Kalyanaraman,Shoshana Brown,H.J. Imker,Ling Song,А.А. Федоров,E.V. Fedorov,R. Toro,B. Hillerich,R.D. Seidel,Y. Patskovsky,M.W. Vetting,Satish K. Nair,Patricia C. Babbitt,Steven C. Almo,J.A. Gerlt,Matthew P. Jacobson	45
12	Inference of Functional Properties from Large-scale Analysis of Enzyme Superfamilies 2011 ·Journal of Biological Chemistry ·Shoshana Brown,Patricia C. Babbitt	42
13	Target selection and annotation for the structural genomics of the amidohydrolase and enolase superfamilies 2009 ·Journal of Structural and Functional Genomics ·Ursula Pieper,Ranyee A. Chiang,(unknown),Shoshana Brown,Margaret E. Glasner,Libusha Kelly,Narayanan Eswar,J.M. Sauder,J.B. Bonanno,Subramanyam Swaminathan,S.K. Burley,Xiaojing Zheng,Mark R. Chance,Steven C. Almo,J.A. Gerlt,Frank M. Raushel,Matthew P. Jacobson,Patricia C. Babbitt,Andrej Săli	24
14	Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamiliesbreakdown → 2009 ·PLoS Computational Biology ·Alexandra M. Schnoes,Shoshana Brown,Igor Dodevski,Patricia C. Babbitt	491
15	Evolution of Enzymatic Activities in the Enolase Superfamily: Stereochemically Distinct Mechanisms in Two Families of cis,cis-Muconate Lactonizing Enzymes 2009 ·Biochemistry ·A. Sakai,А.А. Федоров,E.V. Fedorov,Alexandra M. Schnoes,Margaret E. Glasner,Shoshana Brown,M. Rutter,K.T. Bain,(unknown),T. Gheyi,J.M. Sauder,S.K. Burley,Patricia C. Babbitt,Steven C. Almo,J.A. Gerlt	34
16	Prediction and assignment of function for a divergent N-succinyl amino acid racemase 2007 ·Nature Chemical Biology ·Ling Song,Chakrapani Kalyanaraman,А.А. Федоров,E.V. Fedorov,Margaret E. Glasner,Shoshana Brown,H.J. Imker,Patricia C. Babbitt,Steven C. Almo,Matthew P. Jacobson,J.A. Gerlt	77
17	Structural Diversity within the Mononuclear and Binuclear Active Sites of N-Acetyl-d-glucosamine-6-phosphate Deacetylase^, 2007 ·Biochemistry ·(unknown),Shoshana Brown,А.А. Федоров,E.V. Fedorov,Chengfu Xu,Patricia C. Babbitt,Steven C. Almo,Frank M. Raushel	18
18	Leveraging Enzyme Structure−Function Relationships for Functional Inference and Experimental Design: The Structure−Function Linkage Database 2006 ·Biochemistry ·Scott C.‐H. Pegg,Shoshana Brown,Sunil Ojha,Jennifer L. Seffernick,Elaine C. Meng,John H. Morris,(unknown),Conrad C. Huang,Thomas E. Ferrin,Patricia C. Babbitt	130
19	Using the Structure‐Function Linkage Database to Characterize Functional Domains in Enzymes 2006 ·Current Protocols in Bioinformatics ·Shoshana Brown,Patricia C. Babbitt	6
20	A semiautomated approach to gene discovery through expressed sequence tag data mining: Discovery of new human transporter genes 2003 ·PubMed ·Shoshana Brown,Jean L. Chang,Wolfgang Sadée,Patricia C. Babbitt	29

About Shoshana Brown

Shoshana Brown is a scholar working on Molecular Biology, Materials Chemistry and Biochemistry, having authored 37 papers that have together received 1.8k indexed citations. Recurring topics across this work include Protein Structure and Dynamics (14 papers), Enzyme Structure and Function (14 papers) and Microbial Metabolic Engineering and Bioproduction (10 papers). The work is most often cited by research in Molecular Biology (1.4k citations), Biochemistry (92 citations) and Renewable Energy, Sustainability and the Environment (161 citations). Shoshana Brown has collaborated with scholars based in United States, Israel and Canada. Frequent co-authors include Patricia C. Babbitt, Alexandra M. Schnoes, Igor Dodevski, Steven C. Almo, Elaine C. Meng, Matthew P. Jacobson, Thomas E. Ferrin, Sunil Ojha, Conrad C. Huang and Eyal Akiva. Their work appears in journals such as Nature, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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