Andrej Săli

98.6k total citations · 22 hit papers
381 papers, 66.1k citations indexed

About

Andrej Săli is a scholar working on Molecular Biology, Materials Chemistry and Oncology. According to data from OpenAlex, Andrej Săli has authored 381 papers receiving a total of 66.1k indexed citations (citations by other indexed papers that have themselves been cited), including 318 papers in Molecular Biology, 126 papers in Materials Chemistry and 26 papers in Oncology. Recurrent topics in Andrej Săli's work include Protein Structure and Dynamics (133 papers), Enzyme Structure and Function (124 papers) and RNA and protein synthesis mechanisms (80 papers). Andrej Săli is often cited by papers focused on Protein Structure and Dynamics (133 papers), Enzyme Structure and Function (124 papers) and RNA and protein synthesis mechanisms (80 papers). Andrej Săli collaborates with scholars based in United States, United Kingdom and Germany. Andrej Săli's co-authors include Tom L. Blundell, Benjamin Webb, András Fiser, Min‐Yi Shen, Marc A. Martı́-Renom, Narayanan Eswar, Ben Webb, David Eramian, M. S. Madhusudhan and Roberto Sánchez and has published in prestigious journals such as Nature, Science and Cell.

In The Last Decade

Andrej Săli

376 papers receiving 65.1k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Comparative Protein Modelling by Satisfaction of Spatial Restraints

1993 10.9k citations Andrej Săli et al. profile →
Comparative Protein Structure Modeling Using Modeller

2006 3.8k citations Narayanan Eswar, Marc A. Martı́-Renom et al. profile →
Comparative Protein Structure Modeling Using MODELLER

2016 3.1k citations Benjamin Webb, Andrej Săli profile →
Comparative Protein Structure Modeling of Genes and Genomes

2000 2.6k citations Marc A. Martı́-Renom, Andrej Săli et al. profile →
Comparative Protein Structure Modeling Using MODELLER

2007 2.5k citations Narayanan Eswar, Marc A. Martı́-Renom et al. profile →
Statistical potential for assessment and prediction of protein structures

2006 1.9k citations Andrej Săli et al. profile →
Modeling of loops in protein structures

2000 1.7k citations Andrej Săli et al. profile →
Protein Structure Modeling with MODELLER

2008 1.5k citations Narayanan Eswar, Andrej Săli et al. profile →
Modeller: Generation and Refinement of Homology-Based Protein Structure Models

2003 1.4k citations Andrej Săli et al. profile →
Protein Structure Prediction and Structural Genomics

2001 1.2k citations Andrej Săli et al. profile →
Comparative Protein Structure Modeling Using MODELLER

2014 959 citations Benjamin Webb, Andrej Săli profile →
Evaluation of comparative protein modeling by MODELLER

1995 930 citations Andrej Săli et al. profile →
The molecular architecture of the nuclear pore complex

2007 814 citations Frank Alber, Svetlana Dokudovskaya et al. profile →
Protein Folding: A Perspective from Theory and Experiment

1998 720 citations Andrej Săli et al. profile →
Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters

2014 698 citations Andrej Săli et al. Cell profile →
ModBase, a database of annotated comparative protein structure models, and associated resources

2010 672 citations Benjamin Webb, Dina Schneidman‐Duhovny et al. profile →
ModLoop: automated modeling of loops in protein structures

2003 633 citations Andrej Săli et al. Bioinformatics profile →
Comparative Protein Structure Modeling Using MODELLER

2016 501 citations Benjamin Webb, Andrej Săli profile →
UCSF Chimera, MODELLER, and IMP: An integrated modeling system

2011 500 citations Dina Schneidman‐Duhovny, Andrej Săli et al. profile →
Protein Structure Modeling with MODELLER

2014 461 citations Benjamin Webb, Andrej Săli profile →
Accurate SAXS Profile Computation and its Assessment by Contrast Variation Experiments

2013 448 citations Dina Schneidman‐Duhovny, Andrej Săli et al. profile →
Structure of the 80S Ribosome from Saccharomyces cerevisiae—tRNA-Ribosome and Subunit-Subunit Interactions

2001 402 citations Narayanan Eswar, Andrej Săli et al. Cell profile →

Peers

Countries citing papers authored by Andrej Săli

Since Specialization

Citations

This map shows the geographic impact of Andrej Săli's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Andrej Săli with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Andrej Săli more than expected).

Fields of papers citing papers by Andrej Săli

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Andrej Săli. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Andrej Săli. The network helps show where Andrej Săli may publish in the future.

Co-authorship network of co-authors of Andrej Săli

This figure shows the co-authorship network connecting the top 25 collaborators of Andrej Săli. A scholar is included among the top collaborators of Andrej Săli based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Andrej Săli. Andrej Săli is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work	Indexed citations
1	Effective integration and models of information: lessons from integrative structure modeling 2025 ·Synthese ·(unknown), Andrej Săli	0
2	The molecular architecture of the nuclear basket 2024 ·Cell ·Digvijay Singh, Neelesh Soni, Joshua Hutchings, Ignacia Echeverria, (unknown), (unknown), Sergey Suslov, (unknown), Trevor van Eeuwen, Kelly R. Molloy, Yi Shi, Junjie Wang, Qiang Guo, Brian T. Chait, Javier Fernández-Martı́nez, Michael P. Rout, Andrej Săli, Elizabeth Villa	37
3	Nanobody repertoire generated against the spike protein of ancestral SARS-CoV-2 remains efficacious against the rapidly evolving virus 2024 ·eLife ·Natalia E. Ketaren, Fred D. Mast, Peter C. Fridy, Jean Paul Olivier, Tanmoy Sanyal, Andrej Săli, Brian T. Chait, Michael P. Rout, John D. Aitchison	2
4	Nanobody repertoire generated against the spike protein of ancestral SARS-CoV-2 remains efficacious against the rapidly evolving virus 2023 ·eLife ·Natalia E. Ketaren, Fred D. Mast, Peter C. Fridy, Jean Paul Olivier, Tanmoy Sanyal, Andrej Săli, Brian T. Chait, Michael P. Rout, John D. Aitchison	1
5	Integrative structure determination of histones H3 and H4 using genetic interactions 2022 ·FEBS Journal ·Ignacia Echeverria, Hannes Braberg, Nevan J. Krogan, Andrej Săli	2
6	Integrative analysis reveals unique structural and functional features of the Smc5/6 complex 2021 ·Proceedings of the National Academy of Sciences ·You Yu, Shibai Li, Zheng Ser, Tanmoy Sanyal, Koyi Choi, Bingbing Wan, Huihui Kuang, Andrej Săli, Alex Kentsis, Dinshaw J. Patel, Xiaolan Zhao	35
7	Bayesian metamodeling of complex biological systems across varying representations 2021 ·Proceedings of the National Academy of Sciences ·Barak Raveh, (unknown), Kate L. White, Tanmoy Sanyal, (unknown), (unknown), (unknown), Jitin Singla, Chenxi Wang, Jihui Zhao, (unknown), Nicholas A. Graham, Carl Kesselman, Raymond C. Stevens, Andrej Săli	25
8	Comprehensive Structure and Functional Adaptations of the Yeast Nuclear Pore Complex 2021 ·Zenodo (CERN European Organization for Nuclear Research) ·Christopher W. Akey, Digvijay Singh, (unknown), Ignacia Echeverria, Ilona Nudelman, Brian T. Chait, Andrej Săli, Javier Fernández-Martı́nez, Steven J. Ludtke, Elizabeth Villa, Michael P. Rout	1
9	New system for archiving integrative structures 2021 ·Acta Crystallographica Section D Structural Biology ·Brinda Vallat, Benjamin Webb, (unknown), (unknown), Hongsuda Tangmunarunkit, Sai J. Ganesan, Catherine L. Lawson, John Westbrook, Carl Kesselman, Andrej Săli, Helen M. Berman	25
10	Structural dynamics of the human COP9 signalosome revealed by cross-linking mass spectrometry and integrative modeling 2020 ·Proceedings of the National Academy of Sciences ·Craig Gutierrez, Ilan E. Chemmama, Haibin Mao, Clinton Yu, Ignacia Echeverria, (unknown), Scott D. Rychnovsky, Ning Zheng, Andrej Săli, Lan Huang	50
11	Structural basis of CD4 downregulation by HIV-1 Nef 2020 ·Nature Structural & Molecular Biology ·(unknown), Robyn M. Kaake, Ignacia Echeverria, Marissa Suarez, (unknown), Charlotte A. Stoneham, (unknown), (unknown), (unknown), Andrej Săli, Nevan J. Krogan, John Guatelli, Xiaofei Jia	40
12	Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chaperone 2019 ·eLife ·Abhilash Padavannil, (unknown), Seung Joong Kim, Tolga Çağatay, Jenny Jiou, Chad A. Brautigam, Diana R. Tomchick, Andrej Săli, Sheena D’Arcy, Yuh Min Chook	35
13	Optimizing model representation for integrative structure determination of macromolecular assemblies 2018 ·Proceedings of the National Academy of Sciences ·Shruthi Viswanath, Andrej Săli	15
14	Simple rules for passive diffusion through the nuclear pore complex 2016 ·The Journal of Cell Biology ·Benjamin L. Timney, Barak Raveh, Roxana Mironska, (unknown), Seung Joong Kim, Daniel Russel, Susan R. Wente, Andrej Săli, Michael P. Rout	328
15	A method for integrative structure determination of protein-protein complexes 2012 ·Bioinformatics ·Dina Schneidman‐Duhovny, Andrea Rossi, Agustin Avila-Sakar, Seung Joong Kim, Javier A. Velázquez-Muriel, Pavel Strop, Liang Hong, Kristin A. Krukenberg, Maofu Liao, Ho Min Kim, Solmaz Sobhanifar, Volker Dötsch, Arvind Rajpal, Jaume Pons, David A. Agard, Yifan Cheng, Andrej Săli	66
16	Structure-based discovery of prescription drugs that interact with the norepinephrine transporter, NET 2011 ·Proceedings of the National Academy of Sciences ·Avner Schlessinger, Ethan G. Geier, Hao Fan, John J. Irwin, Brian K. Shoichet, Kathleen M. Giacomini, Andrej Săli	104
17	Function of human Rh based on structure of RhCG at 2.1 Å 2010 ·Proceedings of the National Academy of Sciences ·Franz Gruswitz, Sarika Chaudhary, Joseph D. Ho, Avner Schlessinger, (unknown), Chi-Min Ho, Andrej Săli, Connie M. Westhoff, Robert M. Stroud	163
18	Determination of Cancer Risk Associated with Germ Line BRCA1 Missense Variants by Functional Analysis 2007 ·Cancer Research ·Marcelo A. Carvalho, Sylvia M. Marsillac, Rachel Karchin, Siranoush Manoukian, Scott Grist, Ramona F. Swaby, Turán P. Ürményi, Edson Rondinelli, Rosane Silva, (unknown), Lisa Baumbach, Rebecca Sutphen, (unknown), Katherine L. Nathanson, Andrej Săli, David E. Goldgar, Fergus J. Couch, Paolo Radice, Álvaro N.A. Monteiro	95
19	Simple fold composition and modular architecture of the nuclear pore complex 2006 ·Proceedings of the National Academy of Sciences ·Damien P. Devos, Svetlana Dokudovskaya, Rosemary Williams, Frank Alber, Narayanan Eswar, Brian T. Chait, Michael P. Rout, Andrej Săli	215
20	Structure-Based Assessment of Missense Mutations in Human BRCA1 2004 ·Cancer Research ·Nebojša Mirković, Marc A. Martı́-Renom, Barbara L. Weber, Andrej Săli, Álvaro N.A. Monteiro	76

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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