Sean Hooper

6.3k citations

32 papers · 2.0k indexed · h-index 23

Impact in

Molecular Biology top 5%
- Genomics and Phylogenetic Studies
- RNA and protein synthesis mechanisms
- Bioinformatics and Genomic Networks
- DNA Repair Mechanisms
Ecology top 5%
- Microbial Community Ecology and Physiology
- Bacteriophages and microbial interactions

Papers in

Ecology 11
- Microbial Community Ecology and Physiology 10
- Bacteriophages and microbial interactions 4
Molecular Biology 29
- Genomics and Phylogenetic Studies 20
- Bioinformatics and Genomic Networks 6
- RNA and protein synthesis mechanisms 6
- Cancer-related gene regulation 4
- Machine Learning in Bioinformatics 3

Co-authors: Peer Bork Nikos C. Kyrpides Natalia Ivanova Konrad Foerstner Christian von Mering Athanasios Lykidis Otto G. Berg Konstantinos Mavromatis
Journals: PLoS ONE (7 papers)Bioinformatics (5 papers)Journal of Molecular Evolution (2 papers)BMC Genomics (2 papers)Genome biology (2 papers)
Partner nations: United States Sweden Germany

In The Last Decade

Sean Hooper

32 papers receiving 2.0k citations

Peers

Countries citing papers authored by Sean Hooper

Since Specialization

Citations

This map shows the geographic impact of Sean Hooper's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Sean Hooper with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Sean Hooper more than expected).

Fields of papers citing papers by Sean Hooper

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Sean Hooper. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Sean Hooper. The network helps show where Sean Hooper may publish in the future.

Co-authorship network

The 25 scholars most cited alongside Sean Hooper, linked wherever they have co-authored with each other. Click a name or a connecting line to browse the papers they share.

Border = papers with Sean Hooper Line = papers co-authored together Sean Hooper links everyone, so they are left out of the graph.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work
1	Genome-wide Profiling of Genetic Synthetic Lethality Identifies CDK12 as a Novel Determinant of PARP1/2 Inhibitor Sensitivity Cancer Research ·Ilirjana Bajrami, Jessica Frankum, Asha Konde, Rowan Miller, Farah Rehman, Rachel Brough, James Campbell, David Sims, Rumana Rafiq, Sean Hooper, Lina Chen, Iwanka Kozarewa, Ioannis Assiotis, Kerry Fenwick, Rachael Natrajan, Christopher J. Lord, Alan Ashworth	2013	279
2	Gene rearrangements in hormone receptor negative breast cancers revealed by mate pair sequencing BMC Genomics ·Xiang Jiao, Sean Hooper, Tatjana Djureinovic, Chatarina Larsson, Fredrik Wärnberg, Christian Tellgren‐Roth, Johan Botling, Tobias Sjöblom	2013	32
3	Sequence based analysis of U-2973, a cell line established from a double-hit B-cell lymphoma with concurrent MYC and BCL2 rearrangements BMC Research Notes ·Sean Hooper, J. J. Maier, Elisabeth Sundström, Farah Rehman, Christian Tellgren‐Roth, Tobias Sjöblom, Lucia Cavelier	2012	1
4	Genome-wide sequencing for the identification of rearrangements associated with Tourette syndrome and obsessive-compulsive disorder BMC Medical Genetics ·Sean Hooper, Anna Johansson, Christian Tellgren‐Roth, Eva‐Lena Stattin, Niklas Dahl, Lucia Cavelier, Lars Feuk	2012	21
5	Next generation RNA‐sequencing in prognostic subsets of chronic lymphocytic leukemia American Journal of Hematology ·Larry Mansouri, Rebeqa Gunnarsson, Lesley‐Ann Sutton, Adam Ameur, Sean Hooper, Markus Mayrhofer, Gunnar Juliusson, Anders Isaksson, Ulf Gyllensten, Richard Rosenquist	2012	23
6	Novel Insights into the Diversity of Catabolic Metabolism from Ten Haloarchaeal Genomes PLoS ONE ·Iain Anderson, Carmen Scheuner, Markus Göker, L.Malikova, Sean Hooper, Iris Porat, Hans‐Peter Klenk, Natalia Ivanova, Nikos C. Kyrpides	2011	55
7	Structural Alterations from Multiple Displacement Amplification of a Human Genome Revealed by Mate-Pair Sequencing PLoS ONE ·Xiang Jiao, Stephen G. Holiman, Sean Hooper, Christian Tellgren‐Roth, Liqun He, Yutao Fu, Jonathan Mangion, Tobias Sjöblom	2011	9
8	GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes Nature Methods ·Amrita Pati, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Sean Hooper, Athanasios Lykidis, Nikos C. Kyrpides	2010	234
9	The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota BMC Genomics ·Iain Anderson, Vivian Sorial, 勇一森川, Sean Hooper, Iris Porat, Luke E. Ulrich, James G. Elkins, L.Malikova, Hui Sun, Miriam Land, Alla Lapidus, Susan Lucas, Kerrie Barry, Harald Huber, Igor B. Zhulin, William B. Whitman, Biswarup Mukhopadhyay, Carl R. Woese, James Bristow, Nikos C. Kyrpides	2009	22
10	Microbial co-habitation and lateral gene transfer: what transposases can tell us Genome biology ·Sean Hooper, Konstantinos Mavromatis, Nikos C. Kyrpides	2009	48
11	Focus: Synergistetes Environmental Microbiology ·Philip Hugenholtz, Sean Hooper, Nikos C. Kyrpides	2009	62
12	Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System PLoS ONE ·Konstantinos Mavromatis, Ken Chu, Natalia Ivanova, Sean Hooper, Victor Markowitz, Nikos C. Kyrpides	2009	47
13	Genome Analysis of the Anaerobic Thermohalophilic Bacterium Halothermothrix orenii PLoS ONE ·Konstantinos Mavromatis, Natalia Ivanova, Iain Anderson, Athanasios Lykidis, Sean Hooper, Hui Sun, Victor Kunin, Alla Lapidus, Philip Hugenholtz, Bharat Patel, Nikos C. Kyrpides	2009	69
14	Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach Nucleic Acids Research ·Sean Hooper, Iain Anderson, Amrita Pati, Daniel Dalevi, Konstantinos Mavromatis, Nikos C. Kyrpides	2009	5
15	A Molecular Study of Microbe Transfer between Distant Environments PLoS ONE ·Sean Hooper, Jeroen Raes, Konrad Foerstner, Eoghan Harrington, Daniel Dalevi, Peer Bork	2008	18
16	Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis Molecular Systems Biology ·Sean Hooper, Stéphanie Boué, Roland Krause, Lars Juhl Jensen, Christopher E. Mason, Murad Ghanim, Kevin P. White, Eileen E. M. Furlong, Peer Bork	2007	57
17	Systematic Association of Genes to Phenotypes by Genome and Literature Mining PLoS Biology ·Jan O. Korbel, Tobias Doerks, Lars Juhl Jensen, Carolina Perez‐Iratxeta, Szymon Kaczanowski, Sean Hooper, Miguel A. Andrade‐Navarro, Peer Bork	2005	117
18	Duplication is more common among laterally transferred genes than among indigenous genes Genome biology ·Sean Hooper, Otto G. Berg	2003	55
19	Detection of Genes with Atypical Nucleotide Sequence in Microbial Genomes Journal of Molecular Evolution ·Sean Hooper, Otto G. Berg	2002	35
20	Gradients in nucleotide and codon usage along Escherichia coli genes Nucleic Acids Research ·Sean Hooper	2000	58

About Sean Hooper

Sean Hooper is a scholar working on Ecology, Molecular Biology, Biotechnology, Food Science and Genetics, having authored 32 papers that have together received 2.0k indexed citations. Recurring topics across this work include Genomics and Phylogenetic Studies (20 papers), Microbial Community Ecology and Physiology (10 papers), Bioinformatics and Genomic Networks (6 papers), RNA and protein synthesis mechanisms (6 papers), Bacteriophages and microbial interactions (4 papers), Cancer-related gene regulation (4 papers), Machine Learning in Bioinformatics (3 papers) and Chromosomal and Genetic Variations (3 papers). The work is most often cited by research in Molecular Biology (1.5k citations), Ecology (501 citations), Endocrinology (52 citations), Genetics (273 citations) and Oncology (241 citations). Sean Hooper has collaborated with scholars based in United States, Sweden and Germany. Frequent co-authors include Peer Bork, Nikos C. Kyrpides, Natalia Ivanova, Konrad Foerstner, Christian von Mering, Athanasios Lykidis, Otto G. Berg, Konstantinos Mavromatis, Amrita Pati and Galina Ovchinnikova. Their work appears in journals such as PLoS ONE, Bioinformatics, Journal of Molecular Evolution, BMC Genomics and Genome biology.

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact