Barış Ethem Süzek

4.8k total citations · 2 hit papers
26 papers, 3.0k citations indexed

About

Barış Ethem Süzek is a scholar working on Molecular Biology, Genetics and Infectious Diseases. According to data from OpenAlex, Barış Ethem Süzek has authored 26 papers receiving a total of 3.0k indexed citations (citations by other indexed papers that have themselves been cited), including 19 papers in Molecular Biology, 4 papers in Genetics and 2 papers in Infectious Diseases. Recurrent topics in Barış Ethem Süzek's work include Bioinformatics and Genomic Networks (7 papers), Genomics and Phylogenetic Studies (6 papers) and Machine Learning in Bioinformatics (5 papers). Barış Ethem Süzek is often cited by papers focused on Bioinformatics and Genomic Networks (7 papers), Genomics and Phylogenetic Studies (6 papers) and Machine Learning in Bioinformatics (5 papers). Barış Ethem Süzek collaborates with scholars based in United States, Türkiye and Canada. Barış Ethem Süzek's co-authors include Peter B. McGarvey, Cathy Wu, Hongzhan Huang, Yuqi Wang, Raja Mazumder, María Martin, Séverine Duvaud, Eric Jain, Elisabeth Gasteiger and Isabelle Phan and has published in prestigious journals such as Bioinformatics, PLoS ONE and The FASEB Journal.

In The Last Decade

Barış Ethem Süzek

22 papers receiving 2.9k citations

Hit Papers

2 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches

2014 1.1k citations Barış Ethem Süzek, Yuqi Wang et al. Bioinformatics profile →
UniRef: comprehensive and non-redundant UniProt reference clusters

2007 1.0k citations Barış Ethem Süzek, Hongzhan Huang et al. Bioinformatics profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Barış Ethem Süzek United States	10	2.3k	436	283	221	183	26	3.0k
Peter B. McGarvey United States	20	2.9k 1.3×	416 1.0×	339 1.2×	448 2.0×	200 1.1×	48	4.0k
Hongzhan Huang United States	30	3.4k 1.5×	511 1.2×	449 1.6×	320 1.4×	245 1.3×	71	4.6k
Scott Federhen United States	8	2.0k 0.9×	406 0.9×	255 0.9×	293 1.3×	149 0.8×	9	2.4k
Nicolas Hulo Switzerland	20	2.7k 1.2×	218 0.5×	327 1.2×	567 2.6×	176 1.0×	31	3.8k
Alan Bridge Switzerland	23	3.1k 1.4×	256 0.6×	458 1.6×	400 1.8×	108 0.6×	44	4.1k
Hao Luo China	28	3.6k 1.6×	245 0.6×	423 1.5×	257 1.2×	56 0.3×	66	4.5k
Ashkan Golshani Canada	30	2.8k 1.2×	365 0.8×	189 0.7×	540 2.4×	81 0.4×	139	4.1k
Michele Magrane United Kingdom	14	1.7k 0.7×	175 0.4×	211 0.7×	192 0.9×	75 0.4×	21	2.2k
Aysam Guerler Germany	10	2.6k 1.1×	541 1.2×	450 1.6×	582 2.6×	98 0.5×	14	4.1k
John Wooley United States	24	2.3k 1.0×	580 1.3×	157 0.6×	202 0.9×	202 1.1×	63	2.9k

Countries citing papers authored by Barış Ethem Süzek

Since Specialization

Citations

This map shows the geographic impact of Barış Ethem Süzek's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Barış Ethem Süzek with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Barış Ethem Süzek more than expected).

Fields of papers citing papers by Barış Ethem Süzek

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Barış Ethem Süzek. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Barış Ethem Süzek. The network helps show where Barış Ethem Süzek may publish in the future.

Co-authorship network of co-authors of Barış Ethem Süzek

This figure shows the co-authorship network connecting the top 25 collaborators of Barış Ethem Süzek. A scholar is included among the top collaborators of Barış Ethem Süzek based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Barış Ethem Süzek. Barış Ethem Süzek is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

Keleştemur, Taha, Simon C. Robson, Zoltán H. Németh, et al.. (2025). NTPDase8 Protects Against Liver Ischemia–Reperfusion Injury in Mice. The FASEB Journal. 39(13). e70775–e70775.

Süzek, Barış Ethem, et al.. (2023). Machine Learning Methods for Virus–Host Protein–Protein Interaction Prediction. Methods in molecular biology. 2690. 401–417.

Süzek, Barış Ethem, et al.. (2023). A correlation coefficient-based feature selection approach for virus-host protein-protein interaction prediction. PLoS ONE. 18(5). e0285168–e0285168. 1 indexed citations

Baysal, Ömür, et al.. (2023). Data mining and molecular dynamics analysis to detect HIV-1 reverse transcriptase RNase H activity inhibitor. Molecular Diversity. 28(4). 1869–1888.

Kılıç, Betül, et al.. (2022). First case with RANBP2 biallelic mutation and severe acute necrotizing encephalopathy phenotype. Clinical Neurology and Neurosurgery. 221. 107418–107418. 1 indexed citations

Süzek, Barış Ethem, et al.. (2021). ML-AdVInfect: A Machine-Learning Based Adenoviral Infection Predictor. Frontiers in Molecular Biosciences. 8. 647424–647424. 12 indexed citations

Altuntaş, Ebru, Barış Ethem Süzek, Betül Şahin, et al.. (2019). Comparison of protein expression profile of limb regeneration between neotenic and metamorphic axolotl. Biochemical and Biophysical Research Communications. 522(2). 428–434. 21 indexed citations

Süzek, Barış Ethem, et al.. (2019). Taxonomic diversity-based domain interaction prediction. Pamukkale University Journal of Engineering Sciences. 25(2). 215–222. 1 indexed citations

Süzek, Barış Ethem, et al.. (2019). A QUALITY CONTROL SYSTEM PROTOTYPE FOR DETECTING KNOT DEFECTS IN THE WOODEN PANEL MANUFACTURING. Mugla Journal of Science and Technology. 5(1). 24–33.

10.

McGarvey, Peter B., Barış Ethem Süzek, James N. Baraniuk, et al.. (2014). In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases. BMC Immunology. 15(1). 61–61. 17 indexed citations

11.

Süzek, Barış Ethem, Yuqi Wang, Hongzhan Huang, Peter B. McGarvey, & Cathy Wu. (2014). UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches. Bioinformatics. 31(6). 926–932. 1138 indexed citations breakdown →

12.

Chen, Chuming, Zhiwen Li, Hongzhan Huang, Barış Ethem Süzek, & Cathy Wu. (2013). A fast Peptide Match service for UniProt Knowledgebase. Bioinformatics. 29(21). 2808–2809. 91 indexed citations

13.

Buckler, Andrew J., et al.. (2013). Quantitative Imaging Biomarker Ontology (QIBO) for Knowledge Representation of Biomedical Imaging Biomarkers. Journal of Digital Imaging. 26(4). 630–641. 10 indexed citations

14.

Buckler, Andrew J., et al.. (2013). A Novel Knowledge Representation Framework for the Statistical Validation of Quantitative Imaging Biomarkers. Journal of Digital Imaging. 26(4). 614–629. 4 indexed citations

15.

McGarvey, Peter B., Mauricio Oberti, Anca Dragomir, et al.. (2012). Informatics and data quality at collaborative multicenter Breast and Colon Cancer Family Registries. Journal of the American Medical Informatics Association. 19(e1). e125–e128. 9 indexed citations

16.

Freimuth, Robert R., Mukesh Kumar Sharma, Grace A. Stafford, et al.. (2012). Life sciences domain analysis model. Journal of the American Medical Informatics Association. 19(6). 1095–1102. 7 indexed citations

17.

Jain, Eric, Amos Bairoch, Séverine Duvaud, et al.. (2009). Infrastructure for the life sciences: design and implementation of the UniProt website. BMC Bioinformatics. 10(1). 136–136. 383 indexed citations

18.

Süzek, Barış Ethem, Hongzhan Huang, Peter B. McGarvey, Raja Mazumder, & Cathy Wu. (2007). UniRef: comprehensive and non-redundant UniProt reference clusters. Bioinformatics. 23(10). 1282–1288. 1035 indexed citations breakdown →

19.

Süzek, Barış Ethem, Maria D. Ermolaeva, Mark Schreiber, & Steven L. Salzberg. (2001). A probabilistic method for identifying start codons in bacterial genomes. Bioinformatics. 17(12). 1123–1130. 143 indexed citations

20.

Logan, Beth, Pedro J. García‐Moreno, Barış Ethem Süzek, Zhiping Weng, & Simon Kasif. (2001). A Study of Remote Homology Detection. 9 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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