Ruian Ke

5.2k total citations · 1 hit paper
55 papers, 2.3k citations indexed

About

Ruian Ke is a scholar working on Infectious Diseases, Modeling and Simulation and Epidemiology. According to data from OpenAlex, Ruian Ke has authored 55 papers receiving a total of 2.3k indexed citations (citations by other indexed papers that have themselves been cited), including 24 papers in Infectious Diseases, 17 papers in Modeling and Simulation and 14 papers in Epidemiology. Recurrent topics in Ruian Ke's work include COVID-19 epidemiological studies (17 papers), SARS-CoV-2 and COVID-19 Research (15 papers) and HIV Research and Treatment (12 papers). Ruian Ke is often cited by papers focused on COVID-19 epidemiological studies (17 papers), SARS-CoV-2 and COVID-19 Research (15 papers) and HIV Research and Treatment (12 papers). Ruian Ke collaborates with scholars based in United States, China and United Kingdom. Ruian Ke's co-authors include Ethan Romero-Severson, Nicolas Hengartner, Steven Sanche, Yen Ting Lin, Chonggang Xu, Alan S. Perelson, Ruy M. Ribeiro, Christopher B. Brooke, Carolin Zitzmann and David D. Ho and has published in prestigious journals such as Cell, Proceedings of the National Academy of Sciences and Nature Communications.

In The Last Decade

Ruian Ke

50 papers receiving 2.3k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

High Contagiousness and Rapid Spread of Severe Acute Respiratory Syndrome Coronavirus 2

2020 992 citations Ethan Romero-Severson, Nicolas Hengartner et al. profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Ruian Ke United States	21	1.2k	815	393	277	246	55	2.3k
Cleo Anastassopoulou Greece	22	897 0.8×	593 0.7×	340 0.9×	160 0.6×	454 1.8×	71	1.8k
Müge Çevik United Kingdom	26	2.2k 1.9×	819 1.0×	533 1.4×	277 1.0×	105 0.4×	65	3.5k
Meagan C. Fitzpatrick United States	26	1.5k 1.3×	1.1k 1.3×	606 1.5×	150 0.5×	174 0.7×	66	2.9k
Emma B. Hodcroft Switzerland	20	1.8k 1.5×	454 0.6×	512 1.3×	527 1.9×	325 1.3×	35	2.5k
Massimo Fabiani Italy	30	1.1k 0.9×	255 0.3×	577 1.5×	176 0.6×	237 1.0×	107	2.5k
Colin Campbell United Kingdom	13	1.7k 1.5×	503 0.6×	395 1.0×	307 1.1×	180 0.7×	44	2.3k
Ruth Simmons United Kingdom	18	2.5k 2.2×	749 0.9×	480 1.2×	263 0.9×	98 0.4×	69	3.4k
Philip H. Li China	20	2.3k 2.0×	462 0.6×	440 1.1×	331 1.2×	56 0.2×	149	4.1k
Ethan Romero-Severson United States	18	964 0.8×	624 0.8×	376 1.0×	181 0.7×	273 1.1×	48	1.9k
Mohammad M. Sajadi United States	24	892 0.8×	355 0.4×	313 0.8×	168 0.6×	679 2.8×	83	2.1k

Countries citing papers authored by Ruian Ke

Since Specialization

Citations

This map shows the geographic impact of Ruian Ke's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Ruian Ke with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Ruian Ke more than expected).

Fields of papers citing papers by Ruian Ke

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Ruian Ke. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Ruian Ke. The network helps show where Ruian Ke may publish in the future.

Co-authorship network of co-authors of Ruian Ke

This figure shows the co-authorship network connecting the top 25 collaborators of Ruian Ke. A scholar is included among the top collaborators of Ruian Ke based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Ruian Ke. Ruian Ke is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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20 of 20 papers shown

Nicely, Nathan I., Ashutosh Tripathy, Ruian Ke, et al.. (2024). Stoichiometry for entry and binding properties of the Env protein of R5 T cell-tropic HIV-1 and its evolutionary variant of macrophage-tropic HIV-1. mBio. 15(4). e0032124–e0032124. 3 indexed citations

Zitzmann, Carolin, Ruian Ke, Ruy M. Ribeiro, & Alan S. Perelson. (2024). How robust are estimates of key parameters in standard viral dynamic models?. PLoS Computational Biology. 20(4). e1011437–e1011437. 9 indexed citations

Dorp, Christiaan H. van, Emma E. Goldberg, Ruian Ke, Nicolas Hengartner, & Ethan Romero-Severson. (2022). Global estimates of the fitness advantage of SARS-CoV-2 variant Omicron. Virus Evolution. 8(2). veac089–veac089. 6 indexed citations

Allender, Matthew C., Michael J. Adkesson, Jennifer N. Langan, et al.. (2022). Multi‐species outbreak of SARS‐CoV‐2 Delta variant in a zoological institution, with the detection in two new families of carnivores. Transboundary and Emerging Diseases. 69(5). e3060–e3075. 23 indexed citations

Leitner, Thomas, et al.. (2022). A deep learning approach to real-time HIV outbreak detection using genetic data. PLoS Computational Biology. 18(10). e1010598–e1010598. 8 indexed citations

Torres, Irene, et al.. (2022). Assessing the impact of human mobility to predict regional excess death in Ecuador. Scientific Reports. 12(1). 370–370. 5 indexed citations

Chaturvedi, Sonali, Marie Wolf, Ruian Ke, et al.. (2022). Disrupting autorepression circuitry generates “open-loop lethality” to yield escape-resistant antiviral agents. Cell. 185(12). 2086–2102.e22. 5 indexed citations

Torres, Irene, et al.. (2021). Excess deaths reveal the true spatial, temporal and demographic impact of COVID-19 on mortality in Ecuador. International Journal of Epidemiology. 51(1). 54–62. 31 indexed citations

Schreiber, Sebastian J., et al.. (2021). Cross-scale dynamics and the evolutionary emergence of infectious diseases. Virus Evolution. 7(1). 12 indexed citations

10.

Torres, Irene, et al.. (2021). Excess deaths reveal unequal impact of COVID-19 in Ecuador. BMJ Global Health. 6(9). e006446–e006446. 25 indexed citations

11.

Mavigner, Maud, Laura E. Liao, Ruian Ke, et al.. (2021). CD8 Lymphocyte Depletion Enhances the Latency Reversal Activity of the SMAC Mimetic AZD5582 in ART-Suppressed Simian Immunodeficiency Virus-Infected Rhesus Macaques. Journal of Virology. 95(8). 20 indexed citations

12.

Ke, Ruian, Carolin Zitzmann, David D. Ho, Ruy M. Ribeiro, & Alan S. Perelson. (2021). In vivo kinetics of SARS-CoV-2 infection and its relationship with a person’s infectiousness. Proceedings of the National Academy of Sciences. 118(49). 99 indexed citations

13.

Kim, Kwang Su, Keisuke Ejima, Shoya Iwanami, et al.. (2021). A quantitative model used to compare within-host SARS-CoV-2, MERS-CoV, and SARS-CoV dynamics provides insights into the pathogenesis and treatment of SARS-CoV-2. PLoS Biology. 19(3). e3001128–e3001128. 88 indexed citations

14.

Dorp, Christiaan H. van, Emma E. Goldberg, Nicolas Hengartner, Ruian Ke, & Ethan Romero-Severson. (2021). Estimating the strength of selection for new SARS-CoV-2 variants. Nature Communications. 12(1). 7239–7239. 21 indexed citations

15.

Koelle, Katia, Alex Farrell, Christopher B. Brooke, & Ruian Ke. (2019). Within-host infectious disease models accommodating cellular coinfection, with an application to influenza†. Virus Evolution. 5(2). vez018–vez018. 27 indexed citations

16.

Huang, Yufan, Huaiyu Dai, & Ruian Ke. (2019). Principles of Effective and Robust Innate Immune Response to Viral Infections: A Multiplex Network Analysis. Frontiers in Immunology. 10. 1736–1736. 23 indexed citations

17.

Ke, Ruian, Hui Li, Shuyi Wang, et al.. (2018). Superinfection and cure of infected cells as mechanisms for hepatitis C virus adaptation and persistence. Proceedings of the National Academy of Sciences. 115(30). E7139–E7148. 13 indexed citations

18.

Ke, Ruian, Sharon R. Lewin, Julian Elliott, & Alan S. Perelson. (2015). Modeling the Effects of Vorinostat In Vivo Reveals both Transient and Delayed HIV Transcriptional Activation and Minimal Killing of Latently Infected Cells. PLoS Pathogens. 11(10). e1005237–e1005237. 41 indexed citations

19.

Qi, Hangfei, C. Anders Olson, Nicholas C. Wu, et al.. (2014). A Quantitative High-Resolution Genetic Profile Rapidly Identifies Sequence Determinants of Hepatitis C Viral Fitness and Drug Sensitivity. PLoS Pathogens. 10(4). e1004064–e1004064. 50 indexed citations

20.

Ke, Ruian & James O. Lloyd‐Smith. (2012). Evolutionary Analysis of Human Immunodeficiency Virus Type 1 Therapies Based on Conditionally Replicating Vectors. PLoS Computational Biology. 8(10). e1002744–e1002744. 8 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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