Emma B. Hodcroft

8.5k total citations · 4 hit papers
35 papers, 2.5k citations indexed

About

Emma B. Hodcroft is a scholar working on Infectious Diseases, Modeling and Simulation and Epidemiology. According to data from OpenAlex, Emma B. Hodcroft has authored 35 papers receiving a total of 2.5k indexed citations (citations by other indexed papers that have themselves been cited), including 25 papers in Infectious Diseases, 9 papers in Modeling and Simulation and 8 papers in Epidemiology. Recurrent topics in Emma B. Hodcroft's work include SARS-CoV-2 and COVID-19 Research (17 papers), COVID-19 epidemiological studies (9 papers) and HIV Research and Treatment (7 papers). Emma B. Hodcroft is often cited by papers focused on SARS-CoV-2 and COVID-19 Research (17 papers), COVID-19 epidemiological studies (9 papers) and HIV Research and Treatment (7 papers). Emma B. Hodcroft collaborates with scholars based in Switzerland, United Kingdom and United States. Emma B. Hodcroft's co-authors include Richard A. Neher, Adam S. Lauring, Ivan Aksamentov, Cornelius Roemer, Manon Ragonnet‐Cronin, Andrew Brown, Robert Dyrdak, Esther Fearnhill, Jan Albert and Stéphane Hué and has published in prestigious journals such as Nature, Cell and Proceedings of the National Academy of Sciences.

In The Last Decade

Emma B. Hodcroft

33 papers receiving 2.5k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

Nextclade: clade assignment, mutation calling and quality control for viral genomes

2021 443 citations Emma B. Hodcroft, Richard A. Neher et al. The Journal of Open Source Software profile →
Genetic Variants of SARS-CoV-2—What Do They Mean?

2021 385 citations Emma B. Hodcroft et al. profile →
COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation

2020 334 citations Christian L. Althaus, Richard A. Neher et al. Swiss Medical Weekly profile →
The Evolution and Biology of SARS-CoV-2 Variants

2022 110 citations Emma B. Hodcroft et al. profile →

Peers

Countries citing papers authored by Emma B. Hodcroft

Since Specialization

Citations

This map shows the geographic impact of Emma B. Hodcroft's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Emma B. Hodcroft with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Emma B. Hodcroft more than expected).

Fields of papers citing papers by Emma B. Hodcroft

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Emma B. Hodcroft. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Emma B. Hodcroft. The network helps show where Emma B. Hodcroft may publish in the future.

Co-authorship network of co-authors of Emma B. Hodcroft

This figure shows the co-authorship network connecting the top 25 collaborators of Emma B. Hodcroft. A scholar is included among the top collaborators of Emma B. Hodcroft based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Emma B. Hodcroft. Emma B. Hodcroft is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work	Indexed citations
1	Evolving infectious disease dynamics shape school-based intervention effectiveness 2025 ·Nature Communications ·Javier Perez‐Saez, Mathilde Bellon, Justin Lessler, (unknown), Emma B. Hodcroft, (unknown), Francesco Pennacchio, Julien Lamour, Florian Laubscher, Arnaud G. L’Huillier, Klara M. Posfay‐Barbe, Sebastian J. Maerkl, Idris Guessous, Andrew S. Azman, Isabella Eckerle, Silvia Stringhini, Elsa Lorthe	0
2	Estimating Re and overdispersion in secondary cases from the size of identical sequence clusters of SARS-CoV-2 2025 ·PLoS Computational Biology ·Emma B. Hodcroft, (unknown), Richard A. Neher, Julien Riou, Christian L. Althaus	1
3	Importation of Alpha and Delta variants during the SARS-CoV-2 epidemic in Switzerland: Phylogenetic analysis and intervention scenarios 2023 ·PLoS Pathogens ·Martina L. Reichmuth, Emma B. Hodcroft, Christian L. Althaus	1
4	Functional SARS-CoV-2 cross-reactive CD4 ⁺ T cells established in early childhood decline with age 2023 ·Proceedings of the National Academy of Sciences ·Marion Humbert, (unknown), David Wullimann, Julia Niessl, Emma B. Hodcroft, Curtis Cai, Yu Gao, Ebba Sohlberg, Robert Dyrdak, Flora Mikaeloff, Ujjwal Neogi, Jan Albert, (unknown), Fridtjof Lund‐Johansen, Soo Aleman, Linda Björkhem‐Bergman, Maria C. Jenmalm, Hans‐Gustaf Ljunggren, Marcus Buggert, Annika C. Karlsson	15
5	Impact of cross-border-associated cases on the SARS-CoV-2 epidemic in Switzerland during summer 2020 and 2021 2022 ·Epidemics ·Martina L. Reichmuth, Emma B. Hodcroft, Julien Riou, Richard A. Neher, Niel Hens, Christian L. Althaus	4
6	Evolution, geographic spreading, and demographic distribution of Enterovirus D68 2022 ·PLoS Pathogens ·Emma B. Hodcroft, Robert Dyrdak, Cristina Andrés, Adrian Egli, (unknown), Diego García-Martínez de Artola, Julia Alcoba-Flórez, Hubert G.M. Niesters, Andrés Antón, Randy Poelman, Marijke Reynders, Elke Wollants, Richard A. Neher, Jan Albert	37
7	Identification of resident memory CD8 ⁺ T cells with functional specificity for SARS-CoV-2 in unexposed oropharyngeal lymphoid tissue 2021 ·Science Immunology ·Julia Niessl, Takuya Sekine, Joshua Lange, Viktória Kónya, Marianne Forkel, Jovana Marić, Anna Rao, Luca Mazzurana, Efthymia Kokkinou, (unknown), Sian Llewellyn‐Lacey, Emma B. Hodcroft, Annika C. Karlsson, (unknown), (unknown), David A. Price, Jenny Mjösberg, Danielle Friberg, Marcus Buggert	54
8	Transmission of SARS-CoV-2 in domestic cats imposes a narrow bottleneck 2021 ·PLoS Pathogens ·Katarina M. Braun, Gage K. Moreno, Peter Halfmann, Emma B. Hodcroft, David Baker, (unknown), Andrea M. Weiler, Amelia K. Haj, Masato Hatta, S. Chiba, Tadashi Maemura, Yoshihiro Kawaoka, Katia Koelle, David H. O’Connor, Thomas C. Friedrich	62
9	Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens 2021 ·The Journal of Open Source Software ·John Huddleston, James Hadfield, Thomas R. Sibley, Jover Lee, Kairsten Fay, Misja Ilcisin, Elias Harkins, Trevor Bedford, Richard A. Neher, Emma B. Hodcroft	108
10	Interactions between seasonal human coronaviruses and implications for the SARS-CoV-2 pandemic: A retrospective study in Stockholm, Sweden, 2009-2020 2021 ·Journal of Clinical Virology ·Robert Dyrdak, Emma B. Hodcroft, (unknown), Richard A. Neher, Jan Albert	19
11	Sharing, synthesis and sustainability of data analysis for epidemic preparedness in Europe 2021 ·The Lancet Regional Health - Europe ·Adam J. Kucharski, Emma B. Hodcroft, Moritz U. G. Kraemer	6
12	Public health actions to control new SARS-CoV-2 variants 2021 ·Cell ·Nathan D. Grubaugh, Emma B. Hodcroft, Joseph R. Fauver, Alexandra Phelan, Müge Çevik	84
13	Potential impact of seasonal forcing on a SARS-CoV-2 pandemic 2020 ·Swiss Medical Weekly ·Richard A. Neher, Robert Dyrdak, Valentin Druelle, Emma B. Hodcroft, Jan Albert	164
14	COVID-19 epidemic in Switzerland: on the importance of testing, contact tracing and isolation breakdown → 2020 ·Swiss Medical Weekly ·(unknown), Christian L. Althaus, Richard A. Neher, Silvia Stringhini, Emma B. Hodcroft, Jacques Fellay, Marcel Zwahlen, Gabriela Senti, Manuel Battegay, Annelies Wilder‐Smith, Isabella Eckerle, Matthias Egger, Nicola Low	334
15	Understanding disclosed and cryptic HIV transmission risk via genetic analysis 2019 ·Current Opinion in HIV and AIDS ·Manon Ragonnet‐Cronin, Emma B. Hodcroft, Joel O. Wertheim	14
16	Non-disclosed men who have sex with men in UK HIV transmission networks: phylogenetic analysis of surveillance data 2018 ·The Lancet HIV ·Manon Ragonnet‐Cronin, Stéphane Hué, Emma B. Hodcroft, Anna Tostevin, David Dunn, (unknown), Anton Pozniak, Alison Brown, Valérie Delpech, Andrew Brown	29
17	Identifying Transmission Clusters with Cluster Picker and HIV-TRACE 2016 ·AIDS Research and Human Retroviruses ·Rebecca Rose, Susanna L. Lamers, James J. Dollar, M. Kate Grabowski, Emma B. Hodcroft, Manon Ragonnet‐Cronin, Joel O. Wertheim, Andrew D. Redd, Danielle German, Oliver Laeyendecker	49
18	Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters 2015 ·The Journal of Infectious Diseases ·Manon Ragonnet‐Cronin, Samantha Lycett, Emma B. Hodcroft, Stéphane Hué, Esther Fearnhill, Alison Brown, Valérie Delpech, David Dunn, Andrew Brown	43
19	The Contribution of Viral Genotype to Plasma Viral Set-Point in HIV Infection 2014 ·PLoS Pathogens ·Emma B. Hodcroft, Jarrod D. Hadfield, Esther Fearnhill, (unknown), David Dunn, Siobhan O’Shea, Deenan Pillay, Andrew Brown, (unknown)	24
20	Automated analysis of phylogenetic clusters 2013 ·BMC Bioinformatics ·Manon Ragonnet‐Cronin, Emma B. Hodcroft, Stéphane Hué, Esther Fearnhill, Valérie Delpech, Andrew Brown, Samantha Lycett	249

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

Explore authors with similar magnitude of impact