Peter Kerpedjiev

7.8k total citations
14 papers, 970 citations indexed

About

Peter Kerpedjiev is a scholar working on Molecular Biology, Genetics and Computer Vision and Pattern Recognition. According to data from OpenAlex, Peter Kerpedjiev has authored 14 papers receiving a total of 970 indexed citations (citations by other indexed papers that have themselves been cited), including 10 papers in Molecular Biology, 3 papers in Genetics and 2 papers in Computer Vision and Pattern Recognition. Recurrent topics in Peter Kerpedjiev's work include Genomics and Phylogenetic Studies (7 papers), RNA and protein synthesis mechanisms (6 papers) and RNA modifications and cancer (5 papers). Peter Kerpedjiev is often cited by papers focused on Genomics and Phylogenetic Studies (7 papers), RNA and protein synthesis mechanisms (6 papers) and RNA modifications and cancer (5 papers). Peter Kerpedjiev collaborates with scholars based in United States, Austria and Denmark. Peter Kerpedjiev's co-authors include Ivo L. Hofacker, Stefan Hammer, Fritz Lekschas, Hanspeter Pfister, Nils Gehlenborg, Soohyun Lee, B. Alver, Peter J. Park, Christian Höner zu Siederdissen and Chuck McCallum and has published in prestigious journals such as Nucleic Acids Research, Nature Genetics and Bioinformatics.

In The Last Decade

Peter Kerpedjiev

14 papers receiving 957 citations

Peers

Countries citing papers authored by Peter Kerpedjiev

Since Specialization

Citations

This map shows the geographic impact of Peter Kerpedjiev's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Peter Kerpedjiev with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Peter Kerpedjiev more than expected).

Fields of papers citing papers by Peter Kerpedjiev

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Peter Kerpedjiev. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Peter Kerpedjiev. The network helps show where Peter Kerpedjiev may publish in the future.

Co-authorship network of co-authors of Peter Kerpedjiev

This figure shows the co-authorship network connecting the top 25 collaborators of Peter Kerpedjiev. A scholar is included among the top collaborators of Peter Kerpedjiev based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Peter Kerpedjiev. Peter Kerpedjiev is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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14 of 14 papers shown

#	Work	Indexed citations
1	DrForna: visualization of cotranscriptional folding 2023 ·Bioinformatics ·(unknown), Peter Kerpedjiev, Stefan Hammer, (unknown)	1
2	StainedGlass: interactive visualization of massive tandem repeat structures with identity heatmaps 2022 ·Bioinformatics ·Mitchell R. Vollger, Peter Kerpedjiev, Adam M. Phillippy, Evan E. Eichler	67
3	The dynseq browser track shows context-specific features at nucleotide resolution 2022 ·Nature Genetics ·Surag Nair, (unknown), Daofeng Li, Brian J. Raney, Brian T. Lee, Peter Kerpedjiev, (unknown), Anusri Pampari, Fritz Lekschas, Ting Wang, Maximilian Haeussler, Anshul Kundaje	3
4	HiNT: a computational method for detecting copy number variations and translocations from Hi-C data 2020 ·Genome biology ·Su Wang, Soohyun Lee, Chong Chu, Dhawal Jain, Peter Kerpedjiev, Geoffrey M. Nelson, Jennifer Walsh, B. Alver, Peter J. Park	49
5	Pattern-Driven Navigation in 2D Multiscale Visualizations with Scalable Insets 2019 ·IEEE Transactions on Visualization and Computer Graphics ·Fritz Lekschas, Michael Behrisch, Benjamin Bach, Peter Kerpedjiev, Nils Gehlenborg, Hanspeter Pfister	18
6	mirnylab/cooltools: v0.3.1 2019 ·Zenodo (CERN European Organization for Nuclear Research) ·Sergey V. Venev, Nezar Abdennur, Anton Goloborodko, Ilya M. Flyamer, (unknown), (unknown), (unknown), (unknown), Sameer Y. Abraham, Peter Kerpedjiev, (unknown)	2
7	HiGlass: web-based visual exploration and analysis of genome interaction maps 2018 ·Genome biology ·Peter Kerpedjiev, Nezar Abdennur, Fritz Lekschas, Chuck McCallum, Kasper Dinkla, Hendrik Strobelt, Jacob M. Luber, (unknown), Alaleh Azhir, Nikhil Kumar, (unknown), Soohyun Lee, B. Alver, Hanspeter Pfister, Leonid A. Mirny, Peter J. Park, Nils Gehlenborg	292
8	HiPiler: Visual Exploration of Large Genome Interaction Matrices with Interactive Small Multiples 2017 ·IEEE Transactions on Visualization and Computer Graphics ·Fritz Lekschas, Benjamin Bach, Peter Kerpedjiev, Nils Gehlenborg, Hanspeter Pfister	30
9	pkerpedjiev/gene-citation-counts: Code from Nature News article 2017 ·Zenodo (CERN European Organization for Nuclear Research) ·Peter Kerpedjiev	1
10	RIsearch2: suffix array-based large-scale prediction of RNA–RNA interactions and siRNA off-targets 2017 ·Ferhat Alkan, Anne Wenzel, Oana Palasca, Peter Kerpedjiev, (unknown), Peter F. Stadler, Ivo L. Hofacker, Jan Gorodkin	2
11	RIsearch2: suffix array-based large-scale prediction of RNA–RNA interactions and siRNA off-targets 2016 ·Nucleic Acids Research ·Ferhat Alkan, Anne Wenzel, Oana Palasca, Peter Kerpedjiev, (unknown), Peter F. Stadler, Ivo L. Hofacker, Jan Gorodkin	71
12	Predicting RNA 3D structure using a coarse-grain helix-centered model 2015 ·RNA ·Peter Kerpedjiev, Christian Höner zu Siederdissen, Ivo L. Hofacker	55
13	Forna (force-directed RNA): Simple and effective online RNA secondary structure diagrams 2015 ·Bioinformatics ·Peter Kerpedjiev, Stefan Hammer, Ivo L. Hofacker	346
14	Adaptable probabilistic mapping of short reads using position specific scoring matrices 2014 ·BMC Bioinformatics ·Peter Kerpedjiev, Jes Frellsen, Stinus Lindgreen, Anders Krogh	33

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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