Peter F. Stadler

87.4k total citations · 14 hit papers
668 papers, 38.4k citations indexed

About

Peter F. Stadler is a scholar working on Molecular Biology, Genetics and Cancer Research. According to data from OpenAlex, Peter F. Stadler has authored 668 papers receiving a total of 38.4k indexed citations (citations by other indexed papers that have themselves been cited), including 510 papers in Molecular Biology, 125 papers in Genetics and 85 papers in Cancer Research. Recurrent topics in Peter F. Stadler's work include RNA and protein synthesis mechanisms (250 papers), Genomics and Phylogenetic Studies (193 papers) and RNA modifications and cancer (148 papers). Peter F. Stadler is often cited by papers focused on RNA and protein synthesis mechanisms (250 papers), Genomics and Phylogenetic Studies (193 papers) and RNA modifications and cancer (148 papers). Peter F. Stadler collaborates with scholars based in Germany, Austria and United States. Peter F. Stadler's co-authors include Ivo L. Hofacker, Stephan Wolf, Christoph Flamm, Hakim Tafer, Walter Fontana, Frank Jühling, Peter Schuster, Matthias Bernt, Joern Pütz and Ronny Lorenz and has published in prestigious journals such as Nature, Science and Proceedings of the National Academy of Sciences.

In The Last Decade

Peter F. Stadler

645 papers receiving 37.6k citations

Hit Papers

5 papers align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

MITOS: Improved de novo metazoan mitochondrial genome annotation

2012 3.5k citations Peter F. Stadler et al. profile →
ViennaRNA Package 2.0

2011 3.4k citations Ronny Lorenz, Stephan Wolf et al. profile →
Fast folding and comparison of RNA secondary structures

1994 1.7k citations Ivo L. Hofacker, Peter F. Stadler et al. profile →
The primary transcriptome of the major human pathogen Helicobacter pylori

2010 912 citations Steve Hoffmann, Sven Findeiß et al. profile →
Proteinortho: Detection of (Co-)orthologs in large-scale analysis

2011 859 citations Sven Findeiß, Peter F. Stadler et al. profile →
Prognostic value of tumor oxygenation in 397 head and neck tumors after primary radiation therapy. An international multi-center study

2005 739 citations Peter F. Stadler et al. profile →
tRNAdb 2009: compilation of tRNA sequences and tRNA genes

2008 672 citations Mario Mörl, Peter F. Stadler et al. Nucleic Acids Research profile →
From sequences to shapes and back: a case study in RNA secondary structures

1994 578 citations Peter F. Stadler, Ivo L. Hofacker et al. profile →
Interleukin-6–dependent survival of multiple myeloma cells involves the Stat3-mediated induction of microRNA-21 through a highly conserved enhancer

2007 524 citations Dennis Löffler, Katja Brocke-Heidrich et al. Blood profile →
Fast and reliable prediction of noncoding RNAs

2005 505 citations Ivo L. Hofacker, Peter F. Stadler et al. profile →
The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

2013 478 citations Peter F. Stadler et al. profile →
Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes

2019 423 citations Stephan Wolf, Franziska Reinhardt et al. Nucleic Acids Research profile →
Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions

2016 367 citations Fabian Amman, Peter F. Stadler et al. profile →
Sound–meaning association biases evidenced across thousands of languages

2016 272 citations Peter F. Stadler et al. profile →

Peers

Countries citing papers authored by Peter F. Stadler

Since Specialization

Citations

This map shows the geographic impact of Peter F. Stadler's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Peter F. Stadler with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Peter F. Stadler more than expected).

Fields of papers citing papers by Peter F. Stadler

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Peter F. Stadler. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Peter F. Stadler. The network helps show where Peter F. Stadler may publish in the future.

Co-authorship network of co-authors of Peter F. Stadler

This figure shows the co-authorship network connecting the top 25 collaborators of Peter F. Stadler. A scholar is included among the top collaborators of Peter F. Stadler based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Peter F. Stadler. Peter F. Stadler is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

Sort: Min cites: Since: Top N: Style:

20 of 20 papers shown

#	Work	Indexed citations
1	Computation in chemical graph rewriting networks 2025 ·Journal of Physics Complexity ·Christoph Flamm, Daniel Merkle, Peter F. Stadler	0
2	Phylogenetic and Chemical Probing Information as Soft Constraints in RNA Secondary Structure Prediction 2024 ·Journal of Computational Biology ·(unknown), (unknown), (unknown), (unknown), Ronny Lorenz, Ivo L. Hofacker, Peter F. Stadler	1
3	Partial Imaginary Transition State (ITS) Graphs: A Formal Framework for Research and Analysis of Atom-to-Atom Maps of Unbalanced Chemical Reactions and Their Completions 2024 ·Symmetry ·(unknown), (unknown), (unknown), (unknown), (unknown), Christoph Flamm, (unknown), Daniel Merkle, Peter F. Stadler	2
4	MuDoGeR: Multi‐Domain Genome recovery from metagenomes made easy 2023 ·Molecular Ecology Resources ·Ulisses Nunes da Rocha, (unknown), René Kallies, J. Saraiva, Rodolfo Brizola Toscan, Polonca Štefanič, (unknown), (unknown), (unknown), (unknown), (unknown), (unknown), Alexander J. Probst, Petr Baldrián, Peter F. Stadler	14
5	Mitochondrial Genomes in Perkinsus Decode Conserved Frameshifts in All Genes 2022 ·Molecular Biology and Evolution ·Sebastian G. Gornik, Víctor Flores, Franziska Reinhardt, (unknown), Dayana E. Salas‐Leiva, (unknown), Imen Lassadi, Elin Einarsson, Mario Mörl, Anna Git, Peter F. Stadler, Arnab Pain, Ross F. Waller	6
6	Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis 2021 ·Briefings in Bioinformatics ·(unknown), Christian Otto, Peter F. Stadler, David Langenberger	18
7	PTEN regulates adipose progenitor cell growth, differentiation, and replicative aging 2021 ·Journal of Biological Chemistry ·(unknown), Stephanie Kehr, (unknown), (unknown), (unknown), (unknown), Melanie Penke, Jana Breitfeld, Diana Le Duc, Kathrin Landgraf, Antje Körner, Péter Kovács, Peter F. Stadler, Wieland Kieß, Antje Garten	15
8	EpiDiverse Toolkit: a pipeline suite for the analysis of bisulfite sequencing data in ecological plant epigenetics 2021 ·NAR Genomics and Bioinformatics ·(unknown), (unknown), Christian Otto, Mario Fasold, (unknown), Noé Fernández‐Pozo, Stefan A. Rensing, Peter F. Stadler, David Langenberger	24
9	Beyond Plug and Pray: Context Sensitivity and in silico Design of Artificial Neomycin Riboswitches 2020 ·RNA Biology ·(unknown), (unknown), Katharina Arnold, Sven Findeiß, Christina E. Weinberg, Peter F. Stadler, Mario Mörl	7
10	Identification of RNA 3´ ends and termination sites in Haloferax volcanii 2020 ·RNA Biology ·(unknown), Lisa‐Katharina Maier, Fabian Amman, Stephan Wolf, (unknown), (unknown), Friedhelm Pfeiffer, Peter F. Stadler, Anita Marchfelder	10
11	TerrestrialMetagenomeDB: a public repository of curated and standardized metadata for terrestrial metagenomes 2019 ·Nucleic Acids Research ·(unknown), J. Saraiva, Peter F. Stadler, Ulisses Nunes da Rocha	35
12	The RNA workbench 2.0: next generation RNA data analysis 2019 ·Nucleic Acids Research ·Jörg Fallmann, Pavankumar Videm, Andrea Bagnacani, Bérénice Batut, Maria Doyle, (unknown), Florian Eggenhofer, Peter F. Stadler, Rolf Backofen, Björn Grüning	12
13	Best match graphs 2019 ·White Rose Research Online (University of Leeds, The University of Sheffield, University of York) ·(unknown), (unknown), (unknown), (unknown), Bärbel M. R. Stadler, (unknown), Marc Hellmuth, Maribel Hernández-Rosales, Peter F. Stadler	7
14	Accurate mapping of tRNA reads 2017 ·Bioinformatics ·Anne Hoffmann, Jörg Fallmann, Elisa Vilardo, Mario Mörl, Peter F. Stadler, Fabian Amman	35
15	Chemical Transformation Motifs—Modelling Pathways as Integer Hyperflows 2017 ·IEEE/ACM Transactions on Computational Biology and Bioinformatics ·Jakob L. Andersen, Christoph Flamm, Daniel Merkle, Peter F. Stadler	30
16	SHAPE directed RNA folding 2015 ·Bioinformatics ·Ronny Lorenz, (unknown), Ivo L. Hofacker, Peter F. Stadler, Michael T. Wolfinger	72
17	Convex cycle bases 2013 ·Ars Mathematica Contemporanea ·Marc Hellmuth, Josef Leydold, Peter F. Stadler	6
18	Dicer‐Processed Small RNAs: Rules and Exceptions 2012 ·Journal of Experimental Zoology Part B Molecular and Developmental Evolution ·David Langenberger, Mehmet Volkan Çakır, Steve Hoffmann, Peter F. Stadler	53
19	Interleukin-6–dependent survival of multiple myeloma cells involves the Stat3-mediated induction of microRNA-21 through a highly conserved enhancer breakdown → 2007 ·Blood ·Dennis Löffler, Katja Brocke-Heidrich, Gabriele Pfeifer, (unknown), Jörg Hackermüller, A. Kretzschmar, Renate Burger, Martin Gramatzki, Conny Blumert, (unknown), (unknown), (unknown), Peter F. Stadler, Friedemann Horn	524
20	litsift: Automated Text Categorization in Bibliographic Search 2003 ·Qucosa (Saxon State and University Library Dresden) ·Lukas C. Faulstich, Peter F. Stadler, Caroline Thurner, (unknown)	2

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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