Stinus Lindgreen

6.8k total citations · 2 hit papers
18 papers, 3.1k citations indexed

About

Stinus Lindgreen is a scholar working on Molecular Biology, Genetics and Ecology. According to data from OpenAlex, Stinus Lindgreen has authored 18 papers receiving a total of 3.1k indexed citations (citations by other indexed papers that have themselves been cited), including 15 papers in Molecular Biology, 5 papers in Genetics and 4 papers in Ecology. Recurrent topics in Stinus Lindgreen's work include Genomics and Phylogenetic Studies (10 papers), RNA and protein synthesis mechanisms (7 papers) and RNA modifications and cancer (6 papers). Stinus Lindgreen is often cited by papers focused on Genomics and Phylogenetic Studies (10 papers), RNA and protein synthesis mechanisms (7 papers) and RNA modifications and cancer (6 papers). Stinus Lindgreen collaborates with scholars based in Denmark, New Zealand and United Kingdom. Stinus Lindgreen's co-authors include Ludovic Orlando, Mikkel Schubert, Paul P. Gardner, Karen L. Adair, Anders Krogh, Alex Bateman, Eric P. Nawrocki, Jennifer Daub, Sean R. Eddy and ROBERT FINN and has published in prestigious journals such as Nucleic Acids Research, Nature Communications and Bioinformatics.

In The Last Decade

Stinus Lindgreen

18 papers receiving 3.1k citations

Hit Papers

align trajectories

What are hit papers?

Hit papers significantly outperform the citation benchmark for their cohort. A paper qualifies if it has ≥500 total citations, achieves ≥1.5× the top-1% citation threshold for papers in the same subfield and year (this is the minimum needed to enter the top 1%, not the average within it), or reaches the top citation threshold in at least one of its specific research topics.

AdapterRemoval v2: rapid adapter trimming, identification, and read merging

2016 1.2k citations Mikkel Schubert, Stinus Lindgreen et al. BMC Research Notes profile →
Rfam: updates to the RNA families database

2008 733 citations Paul P. Gardner, Jennifer Daub et al. Nucleic Acids Research profile →

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name	h						Papers	Cites
Stinus Lindgreen Denmark	14	1.8k	928	787	505	198	18	3.1k
Mikkel Schubert Denmark	15	1.3k 0.7×	1.8k 1.9×	847 1.1×	327 0.6×	483 2.4×	21	3.1k
Lynn P. Tomsho United States	23	3.5k 2.0×	960 1.0×	553 0.7×	1.8k 3.6×	193 1.0×	34	5.3k
Konstantin Okonechnikov Germany	10	2.1k 1.2×	823 0.9×	641 0.8×	829 1.6×	48 0.2×	30	4.2k
Ermanno Rizzi Italy	25	1.2k 0.7×	529 0.6×	292 0.4×	158 0.3×	103 0.5×	53	2.1k
Lutz Bachmann Norway	34	1.9k 1.1×	1.4k 1.5×	1.9k 2.4×	720 1.4×	223 1.1×	119	4.5k
André Gilles France	28	1.4k 0.8×	1.7k 1.8×	868 1.1×	435 0.9×	105 0.5×	80	3.8k
Rute R. da Fonseca Denmark	25	1.1k 0.6×	914 1.0×	575 0.7×	206 0.4×	186 0.9×	58	2.4k
Richard H. Thomas United Kingdom	26	1.6k 0.9×	1.4k 1.5×	1.1k 1.4×	509 1.0×	357 1.8×	41	4.1k
Ryuichi Masuda Japan	32	1.0k 0.6×	2.0k 2.2×	2.0k 2.5×	160 0.3×	523 2.6×	170	3.6k
Martin Pollard United States	8	3.5k 2.0×	1.9k 2.0×	852 1.1×	1.4k 2.8×	71 0.4×	12	6.7k

Countries citing papers authored by Stinus Lindgreen

Since Specialization

Citations

This map shows the geographic impact of Stinus Lindgreen's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Stinus Lindgreen with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Stinus Lindgreen more than expected).

Fields of papers citing papers by Stinus Lindgreen

Since Specialization

Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Stinus Lindgreen. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Stinus Lindgreen. The network helps show where Stinus Lindgreen may publish in the future.

Co-authorship network of co-authors of Stinus Lindgreen

This figure shows the co-authorship network connecting the top 25 collaborators of Stinus Lindgreen. A scholar is included among the top collaborators of Stinus Lindgreen based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Stinus Lindgreen. Stinus Lindgreen is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

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18 of 18 papers shown

Eriksson, Hans, Mary Hobart, Ida Moltke, et al.. (2021). Predictors and trajectories of treatment response to SSRIs in patients suffering from PTSD. Psychiatry Research. 301. 113964–113964. 12 indexed citations

Adair, Karen L., Stinus Lindgreen, Anthony M. Poole, et al.. (2019). Above and belowground community strategies respond to different global change drivers. Scientific Reports. 9(1). 2540–2540. 32 indexed citations

Holt, Sylvester, et al.. (2017). Major sulfonate transporter Soa1 in Saccharomyces cerevisiae and considerable substrate diversity in its fungal family. Nature Communications. 8(1). 14247–14247. 18 indexed citations

Sagulenko, Evgeny, Amanda Nouwens, Richard I. Webb, et al.. (2017). Nuclear Pore-Like Structures in a Compartmentalized Bacterium. PLoS ONE. 12(2). e0169432–e0169432. 25 indexed citations

Ren, Xiaoyun, David Eccles, Jane Clapham, et al.. (2017). Genomic, Transcriptomic, and Phenotypic Analyses of Neisseria meningitidis Isolates from Disease Patients and Their Household Contacts. mSystems. 2(6). 2 indexed citations

Schubert, Mikkel, Stinus Lindgreen, & Ludovic Orlando. (2016). AdapterRemoval v2: rapid adapter trimming, identification, and read merging. BMC Research Notes. 9(1). 88–88. 1192 indexed citations breakdown →

Lindgreen, Stinus, Karen L. Adair, & Paul P. Gardner. (2016). An evaluation of the accuracy and speed of metagenome analysis tools. Scientific Reports. 6(1). 19233–19233. 199 indexed citations

Kerpedjiev, Peter, Jes Frellsen, Stinus Lindgreen, & Anders Krogh. (2014). Adaptable probabilistic mapping of short reads using position specific scoring matrices. BMC Bioinformatics. 15(1). 100–100. 33 indexed citations

Lindgreen, Stinus, Sinan U. Umu, Wenting Liu, et al.. (2014). Robust Identification of Noncoding RNA from Transcriptomes Requires Phylogenetically-Informed Sampling. PLoS Computational Biology. 10(10). e1003907–e1003907. 31 indexed citations

10.

Lindgreen, Stinus, Anders Krogh, & Jakob Skou Pedersen. (2014). SNPest: a probabilistic graphical model for estimating genotypes. BMC Research Notes. 7(1). 698–698. 5 indexed citations

11.

Lindgreen, Stinus. (2012). AdapterRemoval: easy cleaning of next-generation sequencing reads. BMC Research Notes. 5(1). 337–337. 444 indexed citations

12.

Schubert, Mikkel, Aurélien Ginolhac, Stinus Lindgreen, et al.. (2012). Improving ancient DNA read mapping against modern reference genomes. BMC Genomics. 13(1). 178–178. 194 indexed citations

13.

Lindgreen, Stinus. (2012). Codon evolution: Mechanisms and Models. 4(1). 8–8. 29 indexed citations

14.

Gardner, Paul P., Jennifer Daub, John Tate, et al.. (2008). Rfam: updates to the RNA families database. Nucleic Acids Research. 37(Database). D136–D140. 733 indexed citations breakdown →

15.

Torarinsson, Elfar & Stinus Lindgreen. (2008). WAR: Webserver for aligning structural RNAs. Nucleic Acids Research. 36(Web Server). W79–W84. 42 indexed citations

16.

Lindgreen, Stinus, Paul P. Gardner, & Anders Krogh. (2007). Multiple alignment and structure prediction of non-coding RNA sequences. BMC Bioinformatics. 8(S8). 5 indexed citations

17.

Lindgreen, Stinus, Paul P. Gardner, & Anders Krogh. (2007). MASTR: multiple alignment and structure prediction of non-coding RNAs using simulated annealing. Bioinformatics. 23(24). 3304–3311. 58 indexed citations

18.

Lindgreen, Stinus, Paul P. Gardner, & Anders Krogh. (2006). Measuring covariation in RNA alignments: physical realism improves information measures. Bioinformatics. 22(24). 2988–2995. 41 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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