Patrick Aloy

15.5k total citations
133 papers, 7.2k citations indexed

About

Patrick Aloy is a scholar working on Molecular Biology, Computational Theory and Mathematics and Materials Chemistry. According to data from OpenAlex, Patrick Aloy has authored 133 papers receiving a total of 7.2k indexed citations (citations by other indexed papers that have themselves been cited), including 111 papers in Molecular Biology, 37 papers in Computational Theory and Mathematics and 14 papers in Materials Chemistry. Recurrent topics in Patrick Aloy's work include Bioinformatics and Genomic Networks (57 papers), Protein Structure and Dynamics (38 papers) and Computational Drug Discovery Methods (37 papers). Patrick Aloy is often cited by papers focused on Bioinformatics and Genomic Networks (57 papers), Protein Structure and Dynamics (38 papers) and Computational Drug Discovery Methods (37 papers). Patrick Aloy collaborates with scholars based in Spain, Germany and United States. Patrick Aloy's co-authors include Robert B. Russell, Roberto Mosca, Amelie Stein, Arnaud Céol, Robert B. Russell, Miquel Duran‐Frigola, Enrique Querol, Hugo Ceulemans, Juan Cedano and Montserrat Soler‐López and has published in prestigious journals such as Science, Proceedings of the National Academy of Sciences and Nucleic Acids Research.

In The Last Decade

Patrick Aloy

130 papers receiving 7.1k citations

Peers — A (Enhanced Table)

Peers by citation overlap · career bar shows stage (early→late) cites · hero ref

Name h Career Trend Papers Cites
Patrick Aloy Spain 44 5.9k 1.5k 1.1k 438 397 133 7.2k
Pierre Tufféry France 37 5.8k 1.0× 1.5k 1.0× 1.1k 1.0× 333 0.8× 213 0.5× 113 7.5k
Carlos J. Camacho United States 39 4.9k 0.8× 1.7k 1.1× 1.5k 1.4× 324 0.7× 478 1.2× 119 6.8k
Attila Gürsoy Türkiye 41 6.4k 1.1× 1.5k 1.0× 1.3k 1.3× 330 0.8× 656 1.7× 134 8.3k
Juan Fernández‐Recio Spain 45 4.6k 0.8× 1.3k 0.9× 1.2k 1.2× 475 1.1× 334 0.8× 128 5.9k
Benjamin Webb United States 19 5.2k 0.9× 722 0.5× 875 0.8× 608 1.4× 427 1.1× 28 7.1k
Özlem Keskin Türkiye 52 7.6k 1.3× 1.9k 1.3× 2.0k 1.9× 399 0.9× 770 1.9× 166 9.5k
Roberto Sánchez United States 32 5.6k 0.9× 692 0.5× 1.0k 1.0× 695 1.6× 307 0.8× 66 7.2k
Ora Schueler‐Furman Israel 42 5.6k 0.9× 1.1k 0.7× 1.1k 1.0× 514 1.2× 302 0.8× 109 6.8k
Yifei Qi United States 28 6.0k 1.0× 807 0.5× 680 0.6× 542 1.2× 485 1.2× 70 8.1k
M. Michael Gromiha India 51 8.4k 1.4× 1.1k 0.7× 2.1k 2.0× 719 1.6× 383 1.0× 339 10.0k

Countries citing papers authored by Patrick Aloy

Since Specialization
Citations

This map shows the geographic impact of Patrick Aloy's research. It shows the number of citations coming from papers published by authors working in each country. You can also color the map by specialization and compare the number of citations received by Patrick Aloy with the expected number of citations based on a country's size and research output (numbers larger than one mean the country cites Patrick Aloy more than expected).

Fields of papers citing papers by Patrick Aloy

Since Specialization
Physical SciencesHealth SciencesLife SciencesSocial Sciences

This network shows the impact of papers produced by Patrick Aloy. Nodes represent research fields, and links connect fields that are likely to share authors. Colored nodes show fields that tend to cite the papers produced by Patrick Aloy. The network helps show where Patrick Aloy may publish in the future.

Co-authorship network of co-authors of Patrick Aloy

This figure shows the co-authorship network connecting the top 25 collaborators of Patrick Aloy. A scholar is included among the top collaborators of Patrick Aloy based on the total number of citations received by their joint publications. Widths of edges represent the number of papers authors have co-authored together. Node borders signify the number of papers an author published with Patrick Aloy. Patrick Aloy is excluded from the visualization to improve readability, since they are connected to all nodes in the network.

All Works

20 of 20 papers shown
1.
Perricone, Ugo, et al.. (2025). APBIO: bioactive profiling of air pollutants through inferred bioactivity signatures and prediction of novel target interactions. Journal of Cheminformatics. 17(1). 13–13. 1 indexed citations
2.
Genna, Vito, Guillem Portella, Montserrat Terrazas, et al.. (2025). Systematic study of hybrid triplex topology and stability suggests a general triplex-mediated regulatory mechanism. Nucleic Acids Research. 53(5). 1 indexed citations
3.
Pons, Carles, et al.. (2023). Global analysis of suppressor mutations that rescue human genetic defects. Genome Medicine. 15(1). 78–78. 2 indexed citations
4.
Graupera, Isabel, Mar Coll, Elisa Pose, et al.. (2022). Molecular characterization of chronic liver disease dynamics: From liver fibrosis to acute-on-chronic liver failure. JHEP Reports. 4(6). 100482–100482. 19 indexed citations
5.
Fehér, Csaba, Lorna Leal, Montserrat Plana, et al.. (2021). Association of Transcriptomic Signatures of Inflammatory Response with Viral Control after Dendritic Cell-Based Therapeutic Vaccination in HIV-1 Infected Individuals. Vaccines. 9(7). 799–799. 2 indexed citations
6.
Meldal, Birgit, Carles Pons, Livia Perfetto, et al.. (2021). Analysing the yeast complexome—the Complex Portal rising to the challenge. Nucleic Acids Research. 49(6). 3156–3167. 4 indexed citations
7.
Parts, Leopold, Bryan-Joseph San Luis, Jia‐Xing Yue, et al.. (2021). Natural variants suppress mutations in hundreds of essential genes. Molecular Systems Biology. 17(5). e10138–e10138. 16 indexed citations
8.
Leeuwen, Jolanda van, Carles Pons, Guihong Tan, et al.. (2020). Systematic analysis of bypass suppression of essential genes. Molecular Systems Biology. 16(9). e9828–e9828. 37 indexed citations
9.
Torrico, Bàrbara, Alex D. Shaw, Roberto Mosca, et al.. (2019). Truncating variant burden in high-functioning autism and pleiotropic effects of LRP1 across psychiatric phenotypes. Journal of Psychiatry and Neuroscience. 44(5). 350–359. 21 indexed citations
10.
Hennrich, Marco L., Natalie Romanov, Patrick Horn, et al.. (2018). Cell-specific proteome analyses of human bone marrow reveal molecular features of age-dependent functional decline. Nature Communications. 9(1). 4004–4004. 63 indexed citations
11.
Jaeger, Samira, Ana Igea, Víctor Alcalde, et al.. (2016). Quantification of Pathway Cross-talk Reveals Novel Synergistic Drug Combinations for Breast Cancer. Cancer Research. 77(2). 459–469. 64 indexed citations
12.
Kumar, Ashwani, Natalia Beloglazova, Cedoljub Bundalovic-Torma, et al.. (2016). Conditional Epistatic Interaction Maps Reveal Global Functional Rewiring of Genome Integrity Pathways in Escherichia coli. Cell Reports. 14(3). 648–661. 29 indexed citations
13.
Mosca, Roberto, Roland A. Pache, & Patrick Aloy. (2012). The Role of Structural Disorder in the Rewiring of Protein Interactions through Evolution. Molecular & Cellular Proteomics. 11(7). M111.014969–1. 48 indexed citations
14.
Pache, Roland A., Arnaud Céol, & Patrick Aloy. (2012). NetAligner--a network alignment server to compare complexes, pathways and whole interactomes. Nucleic Acids Research. 40(W1). W157–W161. 28 indexed citations
15.
16.
Stein, Amelie & Patrick Aloy. (2010). Novel Peptide-Mediated Interactions Derived from High-Resolution 3-Dimensional Structures. PLoS Computational Biology. 6(5). e1000789–e1000789. 51 indexed citations
17.
Stein, Amelie, Arnaud Céol, & Patrick Aloy. (2010). 3did: identification and classification of domain-based interactions of known three-dimensional structure. Nucleic Acids Research. 39(Database). D718–D723. 109 indexed citations
18.
Pache, Roland A. & Patrick Aloy. (2008). Incorporating high‐throughput proteomics experiments into structural biology pipelines: Identification of the low‐hanging fruits. PROTEOMICS. 8(10). 1959–1964. 11 indexed citations
19.
Copley, Richard R., Patrick Aloy, Robert B. Russell, & Maximilian J. Telford. (2004). Systematic searches for molecular synapomorphies in model metazoan genomes give some support for Ecdysozoa after accounting for the idiosyncrasies of Caenorhabditis elegans. Evolution & Development. 6(3). 164–169. 45 indexed citations
20.
Cedano, Juan, Patrick Aloy, Josep A. Pérez-Pons, & Enrique Querol. (1997). Relation between amino acid composition and cellular location of proteins 1 1Edited by F. E. Cohen. Journal of Molecular Biology. 266(3). 594–600. 349 indexed citations

Rankless uses publication and citation data sourced from OpenAlex, an open and comprehensive bibliographic database. While OpenAlex provides broad and valuable coverage of the global research landscape, it—like all bibliographic datasets—has inherent limitations. These include incomplete records, variations in author disambiguation, differences in journal indexing, and delays in data updates. As a result, some metrics and network relationships displayed in Rankless may not fully capture the entirety of a scholar's output or impact.

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